RNA–Protein interactions for RNA: ENST00000466950.5

SEC22A-203, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-203ENST00000466950 PLEKHH1Q9ULM0 1364 aa18.51■□□□□ 0.55
SEC22A-203ENST00000466950 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
SEC22A-203ENST00000466950 NCOA3Q9Y6Q9 1424 aa18.5■□□□□ 0.55
SEC22A-203ENST00000466950 FMN2Q9NZ56 1722 aa18.5■□□□□ 0.55
SEC22A-203ENST00000466950 POGKQ9P215 609 aa18.49■□□□□ 0.55
SEC22A-203ENST00000466950 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
SEC22A-203ENST00000466950 TOPAZ1Q8N9V7 1692 aa18.48■□□□□ 0.55
SEC22A-203ENST00000466950 DISP3Q9P2K9 1392 aa18.48■□□□□ 0.55
SEC22A-203ENST00000466950 TMF1P82094 1093 aa18.47■□□□□ 0.55
SEC22A-203ENST00000466950 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
SEC22A-203ENST00000466950 CCDC7Q96M83 1385 aa18.46■□□□□ 0.55
SEC22A-203ENST00000466950 HIRIP3Q9BW71 556 aaPredicted RBP18.46■□□□□ 0.55
SEC22A-203ENST00000466950 LTBP4Q8N2S1 1624 aa18.45■□□□□ 0.54
SEC22A-203ENST00000466950 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
SEC22A-203ENST00000466950 WAPLQ7Z5K2 1190 aa18.45■□□□□ 0.54
SEC22A-203ENST00000466950 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
SEC22A-203ENST00000466950 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
SEC22A-203ENST00000466950 LRRC7Q96NW7 1537 aa18.44■□□□□ 0.54
SEC22A-203ENST00000466950 DCCP43146 1447 aa18.44■□□□□ 0.54
SEC22A-203ENST00000466950 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
SEC22A-203ENST00000466950 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
SEC22A-203ENST00000466950 RGPD8O14715 1765 aaPredicted RBP18.42■□□□□ 0.54
SEC22A-203ENST00000466950 WASHC2AQ641Q2 1341 aa18.42■□□□□ 0.54
SEC22A-203ENST00000466950 ZNF335Q9H4Z2 1342 aaPredicted RBP18.42■□□□□ 0.54
SEC22A-203ENST00000466950 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
SEC22A-203ENST00000466950 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
SEC22A-203ENST00000466950 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
SEC22A-203ENST00000466950 ATP7BP35670 1465 aa18.4■□□□□ 0.54
SEC22A-203ENST00000466950 C11orf95C9JLR9 678 aaPredicted RBP18.4■□□□□ 0.54
SEC22A-203ENST00000466950 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
SEC22A-203ENST00000466950 ATAD2Q6PL18 1390 aa18.4■□□□□ 0.54
SEC22A-203ENST00000466950 AKAP12Q02952 1782 aa18.4■□□□□ 0.54
SEC22A-203ENST00000466950 ANKARQ7Z5J8 1434 aa18.4■□□□□ 0.54
SEC22A-203ENST00000466950 WASLO00401 505 aaPredicted RBP18.38■□□□□ 0.53
SEC22A-203ENST00000466950 PROSER2Q86WR7 435 aaPredicted RBP18.38■□□□□ 0.53
SEC22A-203ENST00000466950 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
SEC22A-203ENST00000466950 KIF1AQ12756 1690 aa18.35■□□□□ 0.53
SEC22A-203ENST00000466950 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
SEC22A-203ENST00000466950 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
SEC22A-203ENST00000466950 MSH6P52701 1360 aa18.33■□□□□ 0.53
SEC22A-203ENST00000466950 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
SEC22A-203ENST00000466950 C19orf44Q9H6X5 657 aa18.32■□□□□ 0.52
SEC22A-203ENST00000466950 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
SEC22A-203ENST00000466950 MST1RQ04912 1400 aa18.3■□□□□ 0.52
SEC22A-203ENST00000466950 NRKQ7Z2Y5 1582 aa18.3■□□□□ 0.52
SEC22A-203ENST00000466950 C14orf37Q86TY3 774 aa18.29■□□□□ 0.52
SEC22A-203ENST00000466950 PPIP5K1Q6PFW1 1433 aa18.29■□□□□ 0.52
SEC22A-203ENST00000466950 PRR36Q9H6K5 1346 aa18.28■□□□□ 0.52
SEC22A-203ENST00000466950 ANKRD36BQ8N2N9 1353 aa18.28■□□□□ 0.52
SEC22A-203ENST00000466950 KIF20BQ96Q89 1820 aa18.28■□□□□ 0.52
SEC22A-203ENST00000466950 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.52
SEC22A-203ENST00000466950 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
SEC22A-203ENST00000466950 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
SEC22A-203ENST00000466950 CCDC61Q9Y6R9 512 aa18.27■□□□□ 0.52
SEC22A-203ENST00000466950 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
SEC22A-203ENST00000466950 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
SEC22A-203ENST00000466950 RBM33Q96EV2 1170 aaKnown RBP18.26■□□□□ 0.51
SEC22A-203ENST00000466950 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
SEC22A-203ENST00000466950 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
SEC22A-203ENST00000466950 ATF3P18847 181 aa18.24■□□□□ 0.51
SEC22A-203ENST00000466950 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
SEC22A-203ENST00000466950 PLEKHG3A1L390 1219 aa18.23■□□□□ 0.51
SEC22A-203ENST00000466950 NHSL1Q5SYE7 1610 aa18.23■□□□□ 0.51
SEC22A-203ENST00000466950 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
SEC22A-203ENST00000466950 A0A1W2PP64 1363 aa18.22■□□□□ 0.51
SEC22A-203ENST00000466950 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
SEC22A-203ENST00000466950 TRPM3Q9HCF6 1732 aaPredicted RBP18.2■□□□□ 0.5
SEC22A-203ENST00000466950 TMC1Q8TDI8 760 aa18.2■□□□□ 0.5
SEC22A-203ENST00000466950 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
SEC22A-203ENST00000466950 TERF2IPQ9NYB0 399 aa18.2■□□□□ 0.5
SEC22A-203ENST00000466950 EDC4Q6P2E9 1401 aaKnown RBP18.19■□□□□ 0.5
SEC22A-203ENST00000466950 BRD4O60885 1362 aaPredicted RBP18.18■□□□□ 0.5
SEC22A-203ENST00000466950 NPC1L1Q9UHC9 1359 aa18.18■□□□□ 0.5
SEC22A-203ENST00000466950 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
SEC22A-203ENST00000466950 PANK3Q9H999 370 aa18.18■□□□□ 0.5
SEC22A-203ENST00000466950 CABP1Q9NZU7 370 aa18.18■□□□□ 0.5
SEC22A-203ENST00000466950 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
SEC22A-203ENST00000466950 USP6P35125 1406 aa18.17■□□□□ 0.5
SEC22A-203ENST00000466950 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
SEC22A-203ENST00000466950 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
SEC22A-203ENST00000466950 ZNF692Q9BU19 519 aaPredicted RBP18.16■□□□□ 0.5
SEC22A-203ENST00000466950 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 NUTM2FA1L443 756 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 PHF8Q9UPP1 1060 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 ACEP12821 1306 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 PIK3C2AO00443 1686 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 NSD2O96028 1365 aa18.15■□□□□ 0.5
SEC22A-203ENST00000466950 KTN1Q86UP2 1357 aaKnown RBP18.15■□□□□ 0.5
SEC22A-203ENST00000466950 AHDC1Q5TGY3 1603 aaPredicted RBP18.14■□□□□ 0.49
SEC22A-203ENST00000466950 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
SEC22A-203ENST00000466950 DIEXFQ68CQ4 756 aaKnown RBP18.13■□□□□ 0.49
SEC22A-203ENST00000466950 ESCO1Q5FWF5 840 aa18.12■□□□□ 0.49
SEC22A-203ENST00000466950 CARD14Q9BXL6 1004 aa18.12■□□□□ 0.49
SEC22A-203ENST00000466950 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
SEC22A-203ENST00000466950 NGDNQ8NEJ9 315 aaKnown RBP18.11■□□□□ 0.49
SEC22A-203ENST00000466950 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
SEC22A-203ENST00000466950 PXDNQ92626 1479 aa18.11■□□□□ 0.49
SEC22A-203ENST00000466950 CGNL1Q0VF96 1302 aa18.1■□□□□ 0.49
SEC22A-203ENST00000466950 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms