RNA–Protein interactions for RNA: ENST00000466910.5

SRRM1-206, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 799 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-206ENST00000466910 ESCO1Q5FWF5 840 aa28.39■■■□□ 2.14
SRRM1-206ENST00000466910 PNPLA6Q8IY17 1366 aa28.38■■■□□ 2.13
SRRM1-206ENST00000466910 IFT172Q9UG01 1749 aa28.38■■■□□ 2.13
SRRM1-206ENST00000466910 C14orf93Q9H972 538 aaKnown RBP28.38■■■□□ 2.13
SRRM1-206ENST00000466910 SOS2Q07890 1332 aaPredicted RBP28.38■■■□□ 2.13
SRRM1-206ENST00000466910 YTHDC2Q9H6S0 1430 aaKnown RBP28.35■■■□□ 2.13
SRRM1-206ENST00000466910 HRCP23327 699 aa28.34■■■□□ 2.13
SRRM1-206ENST00000466910 NPHP3Q7Z494 1330 aa28.34■■■□□ 2.13
SRRM1-206ENST00000466910 CDC42BPGQ6DT37 1551 aa28.33■■■□□ 2.13
SRRM1-206ENST00000466910 RXRBP28702 533 aa28.33■■■□□ 2.13
SRRM1-206ENST00000466910 CFAP70Q5T0N1 1121 aa28.33■■■□□ 2.13
SRRM1-206ENST00000466910 SIRT1Q96EB6 747 aa28.33■■■□□ 2.13
SRRM1-206ENST00000466910 C8orf37Q96NL8 207 aa28.33■■■□□ 2.13
SRRM1-206ENST00000466910 AFF2P51816 1311 aa28.33■■■□□ 2.13
SRRM1-206ENST00000466910 DHX57Q6P158 1386 aaKnown RBP28.33■■■□□ 2.13
SRRM1-206ENST00000466910 MYOM2P54296 1465 aa28.32■■■□□ 2.12
SRRM1-206ENST00000466910 PLEKHH1Q9ULM0 1364 aa28.31■■■□□ 2.12
SRRM1-206ENST00000466910 LAMC1P11047 1609 aa28.3■■■□□ 2.12
SRRM1-206ENST00000466910 NUTM2FA1L443 756 aa28.3■■■□□ 2.12
SRRM1-206ENST00000466910 NRXN1Q9ULB1 1477 aa28.29■■■□□ 2.12
SRRM1-206ENST00000466910 ADAMTS2O95450 1211 aa28.29■■■□□ 2.12
SRRM1-206ENST00000466910 FOXO3O43524 673 aa28.28■■■□□ 2.12
SRRM1-206ENST00000466910 NGLY1Q96IV0 654 aa28.27■■■□□ 2.12
SRRM1-206ENST00000466910 KNDC1Q76NI1 1749 aa28.26■■■□□ 2.11
SRRM1-206ENST00000466910 KDM2AQ9Y2K7 1162 aa28.24■■■□□ 2.11
SRRM1-206ENST00000466910 DCAF11Q8TEB1 546 aa28.23■■■□□ 2.11
SRRM1-206ENST00000466910 STAC3Q96MF2 364 aa28.23■■■□□ 2.11
SRRM1-206ENST00000466910 QTRT2Q9H974 415 aaKnown RBP28.23■■■□□ 2.11
SRRM1-206ENST00000466910 XPCQ01831 940 aaPredicted RBP28.22■■■□□ 2.11
SRRM1-206ENST00000466910 PRAM1Q96QH2 718 aa28.22■■■□□ 2.11
SRRM1-206ENST00000466910 POGKQ9P215 609 aa28.22■■■□□ 2.11
SRRM1-206ENST00000466910 SAFB2Q14151 953 aaKnown RBP eCLIP28.2■■■□□ 2.1
SRRM1-206ENST00000466910 RBM6P78332 1123 aaKnown RBP28.18■■■□□ 2.1
SRRM1-206ENST00000466910 PXDNQ92626 1479 aa28.18■■■□□ 2.1
SRRM1-206ENST00000466910 CDK12Q9NYV4 1490 aaPredicted RBP28.16■■■□□ 2.1
SRRM1-206ENST00000466910 USP21Q9UK80 565 aa28.16■■■□□ 2.1
SRRM1-206ENST00000466910 PHF8Q9UPP1 1060 aa28.14■■■□□ 2.1
SRRM1-206ENST00000466910 TRAK1Q9UPV9 953 aa28.14■■■□□ 2.1
SRRM1-206ENST00000466910 FMN2Q9NZ56 1722 aa28.13■■■□□ 2.09
SRRM1-206ENST00000466910 KRT28Q7Z3Y7 464 aa28.13■■■□□ 2.09
SRRM1-206ENST00000466910 PSME1Q06323 249 aa28.12■■■□□ 2.09
SRRM1-206ENST00000466910 FNBP4Q8N3X1 1017 aaPredicted RBP28.12■■■□□ 2.09
SRRM1-206ENST00000466910 DLC1Q96QB1 1528 aa28.12■■■□□ 2.09
SRRM1-206ENST00000466910 COL22A1Q8NFW1 1626 aaPredicted RBP28.11■■■□□ 2.09
SRRM1-206ENST00000466910 TRPC5Q9UL62 973 aaPredicted RBP28.11■■■□□ 2.09
SRRM1-206ENST00000466910 SPATA31A3Q5VYP0 1347 aa28.1■■■□□ 2.09
SRRM1-206ENST00000466910 UPF1Q92900 1129 aaKnown RBP eCLIP28.09■■■□□ 2.09
SRRM1-206ENST00000466910 KIF1AQ12756 1690 aa28.09■■■□□ 2.09
SRRM1-206ENST00000466910 ADGRB1O14514 1584 aa28.08■■■□□ 2.09
SRRM1-206ENST00000466910 HIRIP3Q9BW71 556 aaPredicted RBP28.05■■■□□ 2.08
SRRM1-206ENST00000466910 ANKARQ7Z5J8 1434 aa28.04■■■□□ 2.08
SRRM1-206ENST00000466910 RGS12O14924 1447 aa28.03■■■□□ 2.08
SRRM1-206ENST00000466910 EIF3AQ14152 1382 aaKnown RBP28.03■■■□□ 2.08
SRRM1-206ENST00000466910 MINK1Q8N4C8 1332 aaPredicted RBP28.03■■■□□ 2.08
SRRM1-206ENST00000466910 HAP1P54257 671 aaPredicted RBP28.03■■■□□ 2.08
SRRM1-206ENST00000466910 PMFBP1Q8TBY8 1022 aa28.02■■■□□ 2.08
SRRM1-206ENST00000466910 LMOD2Q6P5Q4 547 aa28.01■■■□□ 2.07
SRRM1-206ENST00000466910 TNS3Q68CZ2 1445 aa28■■■□□ 2.07
SRRM1-206ENST00000466910 SBNO1A3KN83 1393 aa27.99■■■□□ 2.07
SRRM1-206ENST00000466910 WASLO00401 505 aaPredicted RBP27.99■■■□□ 2.07
SRRM1-206ENST00000466910 ATRNO75882 1429 aa27.99■■■□□ 2.07
SRRM1-206ENST00000466910 ADGRB2O60241 1585 aa27.98■■■□□ 2.07
SRRM1-206ENST00000466910 ARHGEF10O15013 1369 aa27.97■■■□□ 2.07
SRRM1-206ENST00000466910 BCL9LQ86UU0 1499 aa27.96■■■□□ 2.07
SRRM1-206ENST00000466910 PLEKHG5O94827 1062 aa27.95■■■□□ 2.06
SRRM1-206ENST00000466910 RGPD8O14715 1765 aaPredicted RBP27.95■■■□□ 2.06
SRRM1-206ENST00000466910 GPRASP1Q5JY77 1395 aa27.95■■■□□ 2.06
SRRM1-206ENST00000466910 UNC5CLQ8IV45 518 aa27.94■■■□□ 2.06
SRRM1-206ENST00000466910 CABLES1Q8TDN4 633 aa27.93■■■□□ 2.06
SRRM1-206ENST00000466910 GJD4Q96KN9 370 aaPredicted RBP27.93■■■□□ 2.06
SRRM1-206ENST00000466910 NGDNQ8NEJ9 315 aaKnown RBP27.91■■■□□ 2.06
SRRM1-206ENST00000466910 TULP4Q9NRJ4 1543 aa27.91■■■□□ 2.06
SRRM1-206ENST00000466910 PRR36Q9H6K5 1346 aa27.91■■■□□ 2.06
SRRM1-206ENST00000466910 ATAD2Q6PL18 1390 aa27.9■■■□□ 2.06
SRRM1-206ENST00000466910 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
SRRM1-206ENST00000466910 USP32Q8NFA0 1604 aa27.89■■■□□ 2.06
SRRM1-206ENST00000466910 SLIT2O94813 1529 aa27.87■■■□□ 2.05
SRRM1-206ENST00000466910 NUDT16Q96DE0 195 aaKnown RBP27.86■■■□□ 2.05
SRRM1-206ENST00000466910 PAK3O75914 559 aaPredicted RBP27.84■■■□□ 2.05
SRRM1-206ENST00000466910 CDK19Q9BWU1 502 aa27.84■■■□□ 2.05
SRRM1-206ENST00000466910 NBPF1Q3BBV0 1214 aa27.83■■■□□ 2.05
SRRM1-206ENST00000466910 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
SRRM1-206ENST00000466910 CCDC9Q9Y3X0 531 aaKnown RBP27.81■■■□□ 2.04
SRRM1-206ENST00000466910 FAM83GA6ND36 823 aa27.8■■■□□ 2.04
SRRM1-206ENST00000466910 VPS72Q15906 364 aa27.8■■■□□ 2.04
SRRM1-206ENST00000466910 RALGAPBQ86X10 1494 aa27.8■■■□□ 2.04
SRRM1-206ENST00000466910 KIAA1210Q9ULL0 1709 aa27.8■■■□□ 2.04
SRRM1-206ENST00000466910 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.79■■■□□ 2.04
SRRM1-206ENST00000466910 CCDC61Q9Y6R9 512 aa27.78■■■□□ 2.04
SRRM1-206ENST00000466910 ATP7BP35670 1465 aa27.77■■■□□ 2.04
SRRM1-206ENST00000466910 L3MBTL2Q969R5 705 aa27.77■■■□□ 2.04
SRRM1-206ENST00000466910 CCDC125Q86Z20 511 aa27.75■■■□□ 2.03
SRRM1-206ENST00000466910 TRPM3Q9HCF6 1732 aaPredicted RBP27.75■■■□□ 2.03
SRRM1-206ENST00000466910 CENPJQ9HC77 1338 aaPredicted RBP27.74■■■□□ 2.03
SRRM1-206ENST00000466910 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
SRRM1-206ENST00000466910 SIN3AQ96ST3 1273 aa27.73■■■□□ 2.03
SRRM1-206ENST00000466910 BTG4Q9NY30 223 aa27.73■■■□□ 2.03
SRRM1-206ENST00000466910 SRPK2P78362 688 aaKnown RBP27.72■■■□□ 2.03
SRRM1-206ENST00000466910 ACEP12821 1306 aa27.71■■■□□ 2.03
SRRM1-206ENST00000466910 PLEKHG3A1L390 1219 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms