RNA–Protein interactions for RNA: ENST00000466884.1

COL2A1-204, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 478 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-204ENST00000466884 ATAD2Q6PL18 1390 aa12.82□□□□□ -0.36
COL2A1-204ENST00000466884 PIK3R4Q99570 1358 aa12.82□□□□□ -0.36
COL2A1-204ENST00000466884 SETD5Q9C0A6 1442 aa12.82□□□□□ -0.36
COL2A1-204ENST00000466884 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
COL2A1-204ENST00000466884 DAPK1P53355 1430 aa12.81□□□□□ -0.36
COL2A1-204ENST00000466884 ADAMTS2O95450 1211 aa12.81□□□□□ -0.36
COL2A1-204ENST00000466884 PRR29P0C7W0 189 aa12.8□□□□□ -0.36
COL2A1-204ENST00000466884 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
COL2A1-204ENST00000466884 ADAMTS13Q76LX8 1427 aa12.79□□□□□ -0.36
COL2A1-204ENST00000466884 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
COL2A1-204ENST00000466884 RPRD2Q5VT52 1461 aaKnown RBP12.79□□□□□ -0.36
COL2A1-204ENST00000466884 DDX17Q92841 729 aaKnown RBP12.79□□□□□ -0.36
COL2A1-204ENST00000466884 TMEM131LA2VDJ0 1609 aa12.79□□□□□ -0.36
COL2A1-204ENST00000466884 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
COL2A1-204ENST00000466884 ASXL1Q8IXJ9 1541 aa12.78□□□□□ -0.36
COL2A1-204ENST00000466884 CCDC125Q86Z20 511 aa12.78□□□□□ -0.36
COL2A1-204ENST00000466884 USP21Q9UK80 565 aa12.78□□□□□ -0.36
COL2A1-204ENST00000466884 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
COL2A1-204ENST00000466884 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
COL2A1-204ENST00000466884 DCCP43146 1447 aa12.77□□□□□ -0.37
COL2A1-204ENST00000466884 PTPRUQ92729 1446 aa12.76□□□□□ -0.37
COL2A1-204ENST00000466884 TRPM2O94759 1503 aa12.76□□□□□ -0.37
COL2A1-204ENST00000466884 EP400Q96L91 3159 aa12.76□□□□□ -0.37
COL2A1-204ENST00000466884 NHSL1Q5SYE7 1610 aa12.76□□□□□ -0.37
COL2A1-204ENST00000466884 MST1RQ04912 1400 aa12.75□□□□□ -0.37
COL2A1-204ENST00000466884 SETBP1Q9Y6X0 1596 aa12.75□□□□□ -0.37
COL2A1-204ENST00000466884 FNBP4Q8N3X1 1017 aaPredicted RBP12.73□□□□□ -0.37
COL2A1-204ENST00000466884 ANKRD50Q9ULJ7 1429 aa12.71□□□□□ -0.37
COL2A1-204ENST00000466884 UNC13BO14795 1591 aa12.69□□□□□ -0.38
COL2A1-204ENST00000466884 FAM50AQ14320 339 aaKnown RBP12.69□□□□□ -0.38
COL2A1-204ENST00000466884 ZNF326Q5BKZ1 582 aaKnown RBP12.69□□□□□ -0.38
COL2A1-204ENST00000466884 ADGRL2O95490 1459 aa12.68□□□□□ -0.38
COL2A1-204ENST00000466884 LOC105371045A0A1W2PR82 267 aa12.68□□□□□ -0.38
COL2A1-204ENST00000466884 ATRNO75882 1429 aa12.68□□□□□ -0.38
COL2A1-204ENST00000466884 PTCH1Q13635 1447 aa12.68□□□□□ -0.38
COL2A1-204ENST00000466884 SOS2Q07890 1332 aaPredicted RBP12.67□□□□□ -0.38
COL2A1-204ENST00000466884 LHX8Q68G74 356 aa12.67□□□□□ -0.38
COL2A1-204ENST00000466884 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
COL2A1-204ENST00000466884 ADGRL3Q9HAR2 1447 aa12.67□□□□□ -0.38
COL2A1-204ENST00000466884 METP08581 1390 aa12.67□□□□□ -0.38
COL2A1-204ENST00000466884 XRN1Q8IZH2 1706 aaKnown RBP12.66□□□□□ -0.38
COL2A1-204ENST00000466884 GJD4Q96KN9 370 aaPredicted RBP12.66□□□□□ -0.38
COL2A1-204ENST00000466884 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
COL2A1-204ENST00000466884 C1orf167Q5SNV9 1468 aa12.65□□□□□ -0.38
COL2A1-204ENST00000466884 E9PCH4 1651 aa12.65□□□□□ -0.38
COL2A1-204ENST00000466884 SF3B2Q13435 895 aaKnown RBP12.65□□□□□ -0.38
COL2A1-204ENST00000466884 CD44P16070 742 aaKnown RBP12.64□□□□□ -0.39
COL2A1-204ENST00000466884 DEFB132Q7Z7B7 95 aa12.63□□□□□ -0.39
COL2A1-204ENST00000466884 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
COL2A1-204ENST00000466884 NRXN3Q9Y4C0 1643 aa12.62□□□□□ -0.39
COL2A1-204ENST00000466884 BCL9LQ86UU0 1499 aa12.62□□□□□ -0.39
COL2A1-204ENST00000466884 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
COL2A1-204ENST00000466884 LAMC1P11047 1609 aa12.61□□□□□ -0.39
COL2A1-204ENST00000466884 NUP155O75694 1391 aa12.6□□□□□ -0.39
COL2A1-204ENST00000466884 POTEIP0CG38 1075 aa12.6□□□□□ -0.39
COL2A1-204ENST00000466884 ESCO1Q5FWF5 840 aa12.6□□□□□ -0.39
COL2A1-204ENST00000466884 UNC5CLQ8IV45 518 aa12.59□□□□□ -0.39
COL2A1-204ENST00000466884 NPHP3Q7Z494 1330 aa12.59□□□□□ -0.39
COL2A1-204ENST00000466884 COL22A1Q8NFW1 1626 aaPredicted RBP12.59□□□□□ -0.39
COL2A1-204ENST00000466884 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
COL2A1-204ENST00000466884 FOXO3O43524 673 aa12.57□□□□□ -0.4
COL2A1-204ENST00000466884 IQGAP3Q86VI3 1631 aa12.57□□□□□ -0.4
COL2A1-204ENST00000466884 XPCQ01831 940 aaPredicted RBP12.56□□□□□ -0.4
COL2A1-204ENST00000466884 SEPT12Q8IYM1 358 aa12.56□□□□□ -0.4
COL2A1-204ENST00000466884 MYOM2P54296 1465 aa12.56□□□□□ -0.4
COL2A1-204ENST00000466884 MARF1Q9Y4F3 1742 aaKnown RBP12.56□□□□□ -0.4
COL2A1-204ENST00000466884 LRP5O75197 1615 aa12.55□□□□□ -0.4
COL2A1-204ENST00000466884 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
COL2A1-204ENST00000466884 ROBO2Q9HCK4 1378 aa12.55□□□□□ -0.4
COL2A1-204ENST00000466884 VGFO15240 615 aaPredicted RBP12.54□□□□□ -0.4
COL2A1-204ENST00000466884 HRCP23327 699 aa12.54□□□□□ -0.4
COL2A1-204ENST00000466884 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
COL2A1-204ENST00000466884 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
COL2A1-204ENST00000466884 BAG6P46379 1132 aa12.53□□□□□ -0.4
COL2A1-204ENST00000466884 KRT27Q7Z3Y8 459 aa12.53□□□□□ -0.4
COL2A1-204ENST00000466884 CCDC9Q9Y3X0 531 aaKnown RBP12.53□□□□□ -0.4
COL2A1-204ENST00000466884 GLI3P10071 1580 aa12.52□□□□□ -0.4
COL2A1-204ENST00000466884 SPHKAPQ2M3C7 1700 aa12.52□□□□□ -0.41
COL2A1-204ENST00000466884 HAP1P54257 671 aaPredicted RBP12.52□□□□□ -0.41
COL2A1-204ENST00000466884 ROCK1Q13464 1354 aa12.52□□□□□ -0.41
COL2A1-204ENST00000466884 HFM1A2PYH4 1435 aa12.52□□□□□ -0.41
COL2A1-204ENST00000466884 PXDNQ92626 1479 aa12.52□□□□□ -0.41
COL2A1-204ENST00000466884 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.51□□□□□ -0.41
COL2A1-204ENST00000466884 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
COL2A1-204ENST00000466884 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
COL2A1-204ENST00000466884 CLCN6P51797 869 aa12.51□□□□□ -0.41
COL2A1-204ENST00000466884 SLIT2O94813 1529 aa12.51□□□□□ -0.41
COL2A1-204ENST00000466884 NEXMIFQ5QGS0 1516 aa12.51□□□□□ -0.41
COL2A1-204ENST00000466884 ITGAEP38570 1179 aa12.5□□□□□ -0.41
COL2A1-204ENST00000466884 VPS72Q15906 364 aa12.5□□□□□ -0.41
COL2A1-204ENST00000466884 SPATA31A3Q5VYP0 1347 aa12.49□□□□□ -0.41
COL2A1-204ENST00000466884 A0A0G2JS52 829 aa12.49□□□□□ -0.41
COL2A1-204ENST00000466884 MYT1Q01538 1121 aa12.49□□□□□ -0.41
COL2A1-204ENST00000466884 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
COL2A1-204ENST00000466884 EN1Q05925 392 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-204ENST00000466884 R3HDM1Q15032 1099 aaKnown RBP12.48□□□□□ -0.41
COL2A1-204ENST00000466884 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
COL2A1-204ENST00000466884 KIF1BO60333 1816 aa12.47□□□□□ -0.41
COL2A1-204ENST00000466884 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
COL2A1-204ENST00000466884 RPGRIP1LQ68CZ1 1315 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms