RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 PCMTD1Q96MG8 357 aaPredicted RBP9.05□□□□□ -0.96
EDEM3-205ENST00000466606 C6orf229H3BNL8 230 aa9.04□□□□□ -0.96
EDEM3-205ENST00000466606 ZPR1O75312 459 aa9.04□□□□□ -0.96
EDEM3-205ENST00000466606 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
EDEM3-205ENST00000466606 FMNL1O95466 1100 aaPredicted RBP9.02□□□□□ -0.97
EDEM3-205ENST00000466606 KCNC4Q03721 635 aa9.02□□□□□ -0.97
EDEM3-205ENST00000466606 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
EDEM3-205ENST00000466606 THAP11Q96EK4 314 aa9.02□□□□□ -0.97
EDEM3-205ENST00000466606 NUTM2BA6NNL0 878 aaPredicted RBP9.01□□□□□ -0.97
EDEM3-205ENST00000466606 NUTM2EB1AL46 878 aaPredicted RBP9.01□□□□□ -0.97
EDEM3-205ENST00000466606 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
EDEM3-205ENST00000466606 HRCP23327 699 aa9.01□□□□□ -0.97
EDEM3-205ENST00000466606 GJA5P36382 358 aa9.01□□□□□ -0.97
EDEM3-205ENST00000466606 Q3C1V9 767 aa9.01□□□□□ -0.97
EDEM3-205ENST00000466606 RTL5Q5HYW3 569 aaPredicted RBP9.01□□□□□ -0.97
EDEM3-205ENST00000466606 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
EDEM3-205ENST00000466606 NUTM2AQ8IVF1 878 aaPredicted RBP9.01□□□□□ -0.97
EDEM3-205ENST00000466606 GOPCQ9HD26 462 aa9.01□□□□□ -0.97
EDEM3-205ENST00000466606 MTMR2Q13614 643 aa9□□□□□ -0.97
EDEM3-205ENST00000466606 SPSB2Q99619 263 aa9□□□□□ -0.97
EDEM3-205ENST00000466606 GNL3Q9BVP2 549 aaKnown RBP eCLIP9□□□□□ -0.97
EDEM3-205ENST00000466606 LILRB3O75022 631 aa8.99□□□□□ -0.97
EDEM3-205ENST00000466606 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
EDEM3-205ENST00000466606 PRDM9Q9NQV7 894 aa8.99□□□□□ -0.97
EDEM3-205ENST00000466606 ADH1BP00325 375 aa8.98□□□□□ -0.97
EDEM3-205ENST00000466606 TUSC1Q2TAM9 212 aa8.98□□□□□ -0.97
EDEM3-205ENST00000466606 FAM160A2Q8N612 972 aaPredicted RBP8.98□□□□□ -0.97
EDEM3-205ENST00000466606 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
EDEM3-205ENST00000466606 PLA2G2EQ9NZK7 142 aa8.98□□□□□ -0.97
EDEM3-205ENST00000466606 CFAP99D6REC4 459 aa8.97□□□□□ -0.97
EDEM3-205ENST00000466606 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
EDEM3-205ENST00000466606 TSC1Q92574 1164 aa8.97□□□□□ -0.97
EDEM3-205ENST00000466606 SALL2Q9Y467 1007 aaPredicted RBP8.97□□□□□ -0.97
EDEM3-205ENST00000466606 PRPF38BQ5VTL8 546 aaKnown RBP8.96□□□□□ -0.98
EDEM3-205ENST00000466606 RETREG3Q86VR2 466 aa8.96□□□□□ -0.98
EDEM3-205ENST00000466606 S1PR4O95977 384 aa8.95□□□□□ -0.98
EDEM3-205ENST00000466606 RFC5P40937 340 aa8.94□□□□□ -0.98
EDEM3-205ENST00000466606 SLC6A16Q9GZN6 736 aa8.94□□□□□ -0.98
EDEM3-205ENST00000466606 PPEF1O14829 653 aaPredicted RBP8.93□□□□□ -0.98
EDEM3-205ENST00000466606 SPDYE5A6NIY4 337 aa8.92□□□□□ -0.98
EDEM3-205ENST00000466606 MSS51Q4VC12 460 aa8.92□□□□□ -0.98
EDEM3-205ENST00000466606 PPP2R2DQ66LE6 453 aa8.92□□□□□ -0.98
EDEM3-205ENST00000466606 AP1G2O75843 785 aa8.91□□□□□ -0.98
EDEM3-205ENST00000466606 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
EDEM3-205ENST00000466606 JUNDP17535 347 aa8.9□□□□□ -0.98
EDEM3-205ENST00000466606 CTDSPL2Q05D32 466 aa8.9□□□□□ -0.98
EDEM3-205ENST00000466606 PER1O15534 1290 aaPredicted RBP8.89□□□□□ -0.99
EDEM3-205ENST00000466606 RNF223E7ERA6 249 aa8.88□□□□□ -0.99
EDEM3-205ENST00000466606 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
EDEM3-205ENST00000466606 MMP16P51512 607 aa8.88□□□□□ -0.99
EDEM3-205ENST00000466606 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
EDEM3-205ENST00000466606 IFFO2Q5TF58 517 aa8.87□□□□□ -0.99
EDEM3-205ENST00000466606 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
EDEM3-205ENST00000466606 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
EDEM3-205ENST00000466606 LRRN4Q8WUT4 740 aa8.86□□□□□ -0.99
EDEM3-205ENST00000466606 FCF1Q9Y324 198 aaKnown RBP8.86□□□□□ -0.99
EDEM3-205ENST00000466606 USP17L8P0C7I0 530 aa8.85□□□□□ -0.99
EDEM3-205ENST00000466606 GGCXP38435 758 aa8.85□□□□□ -0.99
EDEM3-205ENST00000466606 A0A0G2JS52 829 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 TMEM259Q4ZIN3 620 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 DESI1Q6ICB0 168 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 LYPD8Q6UX82 237 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 SNRKQ9NRH2 765 aa8.84□□□□□ -0.99
EDEM3-205ENST00000466606 HMX1Q9NP08 348 aaPredicted RBP8.83□□□□□ -1
EDEM3-205ENST00000466606 CCNYL3P0C7X3 344 aa8.82□□□□□ -1
EDEM3-205ENST00000466606 CTHP32929 405 aa8.82□□□□□ -1
EDEM3-205ENST00000466606 PTPRNQ16849 979 aa8.82□□□□□ -1
EDEM3-205ENST00000466606 PTCRAQ6ISU1 281 aaPredicted RBP8.82□□□□□ -1
EDEM3-205ENST00000466606 MAP10Q9P2G4 905 aa8.82□□□□□ -1
EDEM3-205ENST00000466606 GTF3C3Q9Y5Q9 886 aa8.82□□□□□ -1
EDEM3-205ENST00000466606 ANKLE1Q8NAG6 615 aa8.81□□□□□ -1
EDEM3-205ENST00000466606 EPS8L1Q8TE68 723 aa8.8□□□□□ -1
EDEM3-205ENST00000466606 NR6A1Q15406 480 aa8.79□□□□□ -1
EDEM3-205ENST00000466606 BANK1Q8NDB2 785 aa8.79□□□□□ -1
EDEM3-205ENST00000466606 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
EDEM3-205ENST00000466606 F12P00748 615 aaPredicted RBP8.78□□□□□ -1
EDEM3-205ENST00000466606 KCNH2Q12809 1159 aa8.78□□□□□ -1
EDEM3-205ENST00000466606 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
EDEM3-205ENST00000466606 EMID1Q96A84 441 aaPredicted RBP8.78□□□□□ -1
EDEM3-205ENST00000466606 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1.01
EDEM3-205ENST00000466606 MCM6Q14566 821 aa8.76□□□□□ -1.01
EDEM3-205ENST00000466606 UNC93B1Q9H1C4 597 aa8.76□□□□□ -1.01
EDEM3-205ENST00000466606 ZBTB24O43167 697 aaPredicted RBP8.75□□□□□ -1.01
EDEM3-205ENST00000466606 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
EDEM3-205ENST00000466606 TRIM34Q9BYJ4 488 aa8.75□□□□□ -1.01
EDEM3-205ENST00000466606 SLC19A1P41440 591 aa8.74□□□□□ -1.01
EDEM3-205ENST00000466606 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
EDEM3-205ENST00000466606 PRKD2Q9BZL6 878 aa8.74□□□□□ -1.01
EDEM3-205ENST00000466606 BAP1Q92560 729 aa8.73□□□□□ -1.01
EDEM3-205ENST00000466606 FLIIQ13045 1269 aa8.72□□□□□ -1.01
EDEM3-205ENST00000466606 TRIM32Q13049 653 aa8.71□□□□□ -1.02
EDEM3-205ENST00000466606 POM121Q96HA1 1249 aa8.71□□□□□ -1.02
EDEM3-205ENST00000466606 TBC1D2BQ9UPU7 963 aa8.71□□□□□ -1.02
EDEM3-205ENST00000466606 RPIAP49247 311 aa8.7□□□□□ -1.02
EDEM3-205ENST00000466606 GDPD2Q9HCC8 539 aa8.7□□□□□ -1.02
EDEM3-205ENST00000466606 UBTFP17480 764 aaKnown RBP8.69□□□□□ -1.02
EDEM3-205ENST00000466606 FKBPLQ9UIM3 349 aa8.69□□□□□ -1.02
EDEM3-205ENST00000466606 SH3BP2P78314 561 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms