RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 DEPDC5O75140 1603 aa19.62■□□□□ 0.73
GAPDH-206ENST00000466525 PPP2R1AP30153 589 aa19.62■□□□□ 0.73
GAPDH-206ENST00000466525 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
GAPDH-206ENST00000466525 RGL3Q3MIN7 710 aa19.62■□□□□ 0.73
GAPDH-206ENST00000466525 AMER1Q5JTC6 1135 aaPredicted RBP19.62■□□□□ 0.73
GAPDH-206ENST00000466525 ADAMTS8Q9UP79 889 aa19.62■□□□□ 0.73
GAPDH-206ENST00000466525 PLEKHH1Q9ULM0 1364 aa19.62■□□□□ 0.73
GAPDH-206ENST00000466525 RTEL1-TNFRSF6BF6WH68 1400 aa19.62■□□□□ 0.73
GAPDH-206ENST00000466525 KDM5AP29375 1690 aaKnown RBP19.61■□□□□ 0.73
GAPDH-206ENST00000466525 PIP4K2BP78356 416 aa19.61■□□□□ 0.73
GAPDH-206ENST00000466525 FAM161AQ3B820 660 aa19.61■□□□□ 0.73
GAPDH-206ENST00000466525 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
GAPDH-206ENST00000466525 PLIN1O60240 522 aa19.6■□□□□ 0.73
GAPDH-206ENST00000466525 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
GAPDH-206ENST00000466525 WDR43Q15061 677 aaKnown RBP eCLIP19.59■□□□□ 0.73
GAPDH-206ENST00000466525 THEMISQ8N1K5 641 aaPredicted RBP19.59■□□□□ 0.73
GAPDH-206ENST00000466525 KNSTRNQ9Y448 316 aa19.59■□□□□ 0.73
GAPDH-206ENST00000466525 NINLQ9Y2I6 1382 aa19.59■□□□□ 0.73
GAPDH-206ENST00000466525 PHF23Q9BUL5 403 aaPredicted RBP19.59■□□□□ 0.73
GAPDH-206ENST00000466525 MED1Q15648 1581 aaPredicted RBP19.58■□□□□ 0.73
GAPDH-206ENST00000466525 TNRQ92752 1358 aa19.58■□□□□ 0.73
GAPDH-206ENST00000466525 TET3O43151 1660 aa19.58■□□□□ 0.72
GAPDH-206ENST00000466525 SLFN5Q08AF3 891 aa19.57■□□□□ 0.72
GAPDH-206ENST00000466525 LAS1LQ9Y4W2 734 aaKnown RBP19.57■□□□□ 0.72
GAPDH-206ENST00000466525 NKTRP30414 1462 aaKnown RBP19.56■□□□□ 0.72
GAPDH-206ENST00000466525 C8orf34Q49A92 452 aa19.54■□□□□ 0.72
GAPDH-206ENST00000466525 C20orf194Q5TEA3 1177 aa19.54■□□□□ 0.72
GAPDH-206ENST00000466525 VWDEQ8N2E2 1590 aa19.54■□□□□ 0.72
GAPDH-206ENST00000466525 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
GAPDH-206ENST00000466525 NLRP1Q9C000 1473 aa19.53■□□□□ 0.72
GAPDH-206ENST00000466525 GSE1Q14687 1217 aa19.52■□□□□ 0.72
GAPDH-206ENST00000466525 MYOM2P54296 1465 aa19.52■□□□□ 0.72
GAPDH-206ENST00000466525 KIF3BO15066 747 aa19.51■□□□□ 0.71
GAPDH-206ENST00000466525 MED14O60244 1454 aa19.51■□□□□ 0.71
GAPDH-206ENST00000466525 NFKBIBQ15653 356 aa19.51■□□□□ 0.71
GAPDH-206ENST00000466525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
GAPDH-206ENST00000466525 AAMPQ13685 434 aa19.5■□□□□ 0.71
GAPDH-206ENST00000466525 E9PSI1 815 aa19.49■□□□□ 0.71
GAPDH-206ENST00000466525 FBXO31Q5XUX0 539 aaPredicted RBP19.49■□□□□ 0.71
GAPDH-206ENST00000466525 DAXXQ9UER7 740 aaPredicted RBP19.48■□□□□ 0.71
GAPDH-206ENST00000466525 NPHP4O75161 1426 aaPredicted RBP19.48■□□□□ 0.71
GAPDH-206ENST00000466525 IFT172Q9UG01 1749 aa19.48■□□□□ 0.71
GAPDH-206ENST00000466525 SBNO2Q9Y2G9 1366 aa19.48■□□□□ 0.71
GAPDH-206ENST00000466525 PDE3AQ14432 1141 aa19.47■□□□□ 0.71
GAPDH-206ENST00000466525 CGNL1Q0VF96 1302 aa19.47■□□□□ 0.71
GAPDH-206ENST00000466525 UGGT1Q9NYU2 1555 aa19.46■□□□□ 0.71
GAPDH-206ENST00000466525 POLR3AO14802 1390 aaPredicted RBP19.44■□□□□ 0.7
GAPDH-206ENST00000466525 MAPK8IP3Q9UPT6 1336 aa19.43■□□□□ 0.7
GAPDH-206ENST00000466525 ERVK-7P63135 1459 aa19.43■□□□□ 0.7
GAPDH-206ENST00000466525 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
GAPDH-206ENST00000466525 IL27Q8NEV9 243 aa19.42■□□□□ 0.7
GAPDH-206ENST00000466525 KIF1BO60333 1816 aa19.42■□□□□ 0.7
GAPDH-206ENST00000466525 NRXN1Q9ULB1 1477 aa19.42■□□□□ 0.7
GAPDH-206ENST00000466525 SETBP1Q9Y6X0 1596 aa19.42■□□□□ 0.7
GAPDH-206ENST00000466525 USP32Q8NFA0 1604 aa19.42■□□□□ 0.7
GAPDH-206ENST00000466525 SKAP1Q86WV1 359 aa19.39■□□□□ 0.7
GAPDH-206ENST00000466525 SHPRHQ149N8 1683 aa19.39■□□□□ 0.69
GAPDH-206ENST00000466525 KANK1Q14678 1352 aa19.38■□□□□ 0.69
GAPDH-206ENST00000466525 LRRC7Q96NW7 1537 aa19.37■□□□□ 0.69
GAPDH-206ENST00000466525 ZC3H13Q5T200 1668 aaKnown RBP19.37■□□□□ 0.69
GAPDH-206ENST00000466525 MROH1Q8NDA8 1641 aa19.35■□□□□ 0.69
GAPDH-206ENST00000466525 ALKQ9UM73 1620 aa19.35■□□□□ 0.69
GAPDH-206ENST00000466525 APAF1O14727 1248 aa19.35■□□□□ 0.69
GAPDH-206ENST00000466525 LMTK2Q8IWU2 1503 aa19.34■□□□□ 0.69
GAPDH-206ENST00000466525 USP19O94966 1318 aa19.34■□□□□ 0.69
GAPDH-206ENST00000466525 FRAT1Q92837 279 aaPredicted RBP19.34■□□□□ 0.69
GAPDH-206ENST00000466525 CLUAP1Q96AJ1 413 aa19.33■□□□□ 0.68
GAPDH-206ENST00000466525 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
GAPDH-206ENST00000466525 CENPJQ9HC77 1338 aaPredicted RBP19.32■□□□□ 0.68
GAPDH-206ENST00000466525 EFCAB6Q5THR3 1501 aa19.32■□□□□ 0.68
GAPDH-206ENST00000466525 BECN1Q14457 450 aa19.31■□□□□ 0.68
GAPDH-206ENST00000466525 PMFBP1Q8TBY8 1022 aa19.31■□□□□ 0.68
GAPDH-206ENST00000466525 BCAR3O75815 825 aa19.3■□□□□ 0.68
GAPDH-206ENST00000466525 RGS3P49796 1198 aa19.3■□□□□ 0.68
GAPDH-206ENST00000466525 SLC4A3P48751 1232 aa19.29■□□□□ 0.68
GAPDH-206ENST00000466525 CCDC27Q2M243 656 aa19.29■□□□□ 0.68
GAPDH-206ENST00000466525 IGHDP01880 384 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 EID1Q9Y6B2 187 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 ADGRB3O60242 1522 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 WDR63Q8IWG1 891 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 CARD14Q9BXL6 1004 aa19.28■□□□□ 0.68
GAPDH-206ENST00000466525 ABCC3O15438 1527 aa19.27■□□□□ 0.68
GAPDH-206ENST00000466525 FAM135BQ49AJ0 1406 aa19.26■□□□□ 0.67
GAPDH-206ENST00000466525 TXNDC2Q86VQ3 553 aa19.26■□□□□ 0.67
GAPDH-206ENST00000466525 PUS7Q96PZ0 661 aaKnown RBP19.26■□□□□ 0.67
GAPDH-206ENST00000466525 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
GAPDH-206ENST00000466525 RGS17Q9UGC6 210 aaPredicted RBP19.25■□□□□ 0.67
GAPDH-206ENST00000466525 QRICH2Q9H0J4 1663 aa19.25■□□□□ 0.67
GAPDH-206ENST00000466525 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
GAPDH-206ENST00000466525 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
GAPDH-206ENST00000466525 PPLO60437 1756 aa19.25■□□□□ 0.67
GAPDH-206ENST00000466525 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
GAPDH-206ENST00000466525 BRPF3Q9ULD4 1205 aa19.24■□□□□ 0.67
GAPDH-206ENST00000466525 ADGRB2O60241 1585 aa19.24■□□□□ 0.67
GAPDH-206ENST00000466525 FAM43AQ8N2R8 423 aa19.23■□□□□ 0.67
GAPDH-206ENST00000466525 ANO8Q9HCE9 1232 aaPredicted RBP19.23■□□□□ 0.67
GAPDH-206ENST00000466525 SLIT1O75093 1534 aa19.22■□□□□ 0.67
GAPDH-206ENST00000466525 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms