RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 POGKQ9P215 609 aa21.24■□□□□ 0.99
SLX4-202ENST00000466154 CGNL1Q0VF96 1302 aa21.24■□□□□ 0.99
SLX4-202ENST00000466154 EVC2Q86UK5 1308 aa21.24■□□□□ 0.99
SLX4-202ENST00000466154 GGNBP2Q9H3C7 697 aa21.24■□□□□ 0.99
SLX4-202ENST00000466154 FBXO31Q5XUX0 539 aaPredicted RBP21.23■□□□□ 0.99
SLX4-202ENST00000466154 SLC4A3P48751 1232 aa21.23■□□□□ 0.99
SLX4-202ENST00000466154 CFAP53Q96M91 514 aa21.23■□□□□ 0.99
SLX4-202ENST00000466154 NPC1L1Q9UHC9 1359 aa21.23■□□□□ 0.99
SLX4-202ENST00000466154 CLUAP1Q96AJ1 413 aa21.23■□□□□ 0.99
SLX4-202ENST00000466154 MS4A1P11836 297 aa21.22■□□□□ 0.99
SLX4-202ENST00000466154 CENPQQ7L2Z9 268 aaPredicted RBP21.22■□□□□ 0.99
SLX4-202ENST00000466154 DEKP35659 375 aaKnown RBP21.21■□□□□ 0.99
SLX4-202ENST00000466154 PPM1GO15355 546 aaPredicted RBP21.2■□□□□ 0.98
SLX4-202ENST00000466154 NKTRP30414 1462 aaKnown RBP21.19■□□□□ 0.98
SLX4-202ENST00000466154 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
SLX4-202ENST00000466154 PRAM1Q96QH2 718 aa21.18■□□□□ 0.98
SLX4-202ENST00000466154 DAXXQ9UER7 740 aaPredicted RBP21.17■□□□□ 0.98
SLX4-202ENST00000466154 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
SLX4-202ENST00000466154 FRMPD1Q5SYB0 1578 aa21.17■□□□□ 0.98
SLX4-202ENST00000466154 RPGRIP1LQ68CZ1 1315 aa21.17■□□□□ 0.98
SLX4-202ENST00000466154 TNNQ9UQP3 1299 aa21.16■□□□□ 0.98
SLX4-202ENST00000466154 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
SLX4-202ENST00000466154 MLH3Q9UHC1 1453 aa21.16■□□□□ 0.98
SLX4-202ENST00000466154 KDM2BQ8NHM5 1336 aa21.16■□□□□ 0.98
SLX4-202ENST00000466154 TRMT2AQ8IZ69 625 aaKnown RBP21.16■□□□□ 0.98
SLX4-202ENST00000466154 FAM69CQ0P6D2 419 aa21.15■□□□□ 0.98
SLX4-202ENST00000466154 HECW2Q9P2P5 1572 aa21.15■□□□□ 0.98
SLX4-202ENST00000466154 KIAA1210Q9ULL0 1709 aa21.15■□□□□ 0.98
SLX4-202ENST00000466154 ABCC3O15438 1527 aa21.14■□□□□ 0.98
SLX4-202ENST00000466154 POLR3AO14802 1390 aaPredicted RBP21.14■□□□□ 0.97
SLX4-202ENST00000466154 IGHDP01880 384 aa21.14■□□□□ 0.97
SLX4-202ENST00000466154 FBLN1P23142 703 aa21.13■□□□□ 0.97
SLX4-202ENST00000466154 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.13■□□□□ 0.97
SLX4-202ENST00000466154 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
SLX4-202ENST00000466154 NRXN1Q9ULB1 1477 aa21.12■□□□□ 0.97
SLX4-202ENST00000466154 TSR2Q969E8 191 aaKnown RBP21.12■□□□□ 0.97
SLX4-202ENST00000466154 LMTK2Q8IWU2 1503 aa21.12■□□□□ 0.97
SLX4-202ENST00000466154 NEFMP07197 916 aa21.11■□□□□ 0.97
SLX4-202ENST00000466154 QRICH2Q9H0J4 1663 aa21.1■□□□□ 0.97
SLX4-202ENST00000466154 FAM161AQ3B820 660 aa21.08■□□□□ 0.97
SLX4-202ENST00000466154 SLC52A1Q9NWF4 448 aa21.08■□□□□ 0.97
SLX4-202ENST00000466154 ADGRB1O14514 1584 aa21.07■□□□□ 0.96
SLX4-202ENST00000466154 RARSP54136 660 aaKnown RBP21.07■□□□□ 0.96
SLX4-202ENST00000466154 IFT172Q9UG01 1749 aa21.07■□□□□ 0.96
SLX4-202ENST00000466154 WAPLQ7Z5K2 1190 aa21.07■□□□□ 0.96
SLX4-202ENST00000466154 MAPK8IP3Q9UPT6 1336 aa21.06■□□□□ 0.96
SLX4-202ENST00000466154 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
SLX4-202ENST00000466154 A0A1W2PP64 1363 aa21.06■□□□□ 0.96
SLX4-202ENST00000466154 RLBP1P12271 317 aa21.06■□□□□ 0.96
SLX4-202ENST00000466154 ANKRD36BQ8N2N9 1353 aa21.05■□□□□ 0.96
SLX4-202ENST00000466154 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
SLX4-202ENST00000466154 TERF2IPQ9NYB0 399 aa21.04■□□□□ 0.96
SLX4-202ENST00000466154 PPLO60437 1756 aa21.04■□□□□ 0.96
SLX4-202ENST00000466154 CDK19Q9BWU1 502 aa21.04■□□□□ 0.96
SLX4-202ENST00000466154 GLI2P10070 1586 aa21.04■□□□□ 0.96
SLX4-202ENST00000466154 C8orf34Q49A92 452 aa21.04■□□□□ 0.96
SLX4-202ENST00000466154 FTSJ3Q8IY81 847 aaKnown RBP21.04■□□□□ 0.96
SLX4-202ENST00000466154 NEURL4Q96JN8 1562 aa21.03■□□□□ 0.96
SLX4-202ENST00000466154 CFAP74Q9C0B2 1584 aa21.03■□□□□ 0.96
SLX4-202ENST00000466154 DDRGK1Q96HY6 314 aa21.03■□□□□ 0.96
SLX4-202ENST00000466154 SETBP1Q9Y6X0 1596 aa21.03■□□□□ 0.96
SLX4-202ENST00000466154 NGEFQ8N5V2 710 aa21.02■□□□□ 0.96
SLX4-202ENST00000466154 SIGLEC1Q9BZZ2 1709 aa21.02■□□□□ 0.96
SLX4-202ENST00000466154 PDE3AQ14432 1141 aa21.02■□□□□ 0.96
SLX4-202ENST00000466154 HDGFL2Q7Z4V5 671 aaPredicted RBP21.02■□□□□ 0.96
SLX4-202ENST00000466154 CAMSAP1Q5T5Y3 1602 aa21.02■□□□□ 0.96
SLX4-202ENST00000466154 FYB1O15117 783 aa21.02■□□□□ 0.95
SLX4-202ENST00000466154 MYH16Q9H6N6 1097 aa21.02■□□□□ 0.95
SLX4-202ENST00000466154 TULP4Q9NRJ4 1543 aa21.01■□□□□ 0.95
SLX4-202ENST00000466154 SMC4Q9NTJ3 1288 aa21■□□□□ 0.95
SLX4-202ENST00000466154 NEO1Q92859 1461 aa21■□□□□ 0.95
SLX4-202ENST00000466154 EXOSC9Q06265 439 aaKnown RBP21■□□□□ 0.95
SLX4-202ENST00000466154 WDR63Q8IWG1 891 aa21■□□□□ 0.95
SLX4-202ENST00000466154 DIP2CQ9Y2E4 1556 aa20.99■□□□□ 0.95
SLX4-202ENST00000466154 RIPK4P57078 832 aa20.98■□□□□ 0.95
SLX4-202ENST00000466154 PCDHB15Q9Y5E8 787 aa20.98■□□□□ 0.95
SLX4-202ENST00000466154 NEXMIFQ5QGS0 1516 aa20.98■□□□□ 0.95
SLX4-202ENST00000466154 MYO3AQ8NEV4 1616 aa20.98■□□□□ 0.95
SLX4-202ENST00000466154 ESF1Q9H501 851 aaKnown RBP20.98■□□□□ 0.95
SLX4-202ENST00000466154 HMOX1P09601 288 aa20.97■□□□□ 0.95
SLX4-202ENST00000466154 TMPOP42166 694 aaKnown RBP20.96■□□□□ 0.95
SLX4-202ENST00000466154 NUTM2FA1L443 756 aa20.96■□□□□ 0.95
SLX4-202ENST00000466154 DIAPH1O60610 1272 aaKnown RBP20.96■□□□□ 0.95
SLX4-202ENST00000466154 ITPRIPQ8IWB1 547 aa20.95■□□□□ 0.94
SLX4-202ENST00000466154 YTHDC2Q9H6S0 1430 aaKnown RBP20.94■□□□□ 0.94
SLX4-202ENST00000466154 SEC24BO95487 1268 aa20.93■□□□□ 0.94
SLX4-202ENST00000466154 NCKAP5LQ9HCH0 1330 aa20.93■□□□□ 0.94
SLX4-202ENST00000466154 TXNDC2Q86VQ3 553 aa20.93■□□□□ 0.94
SLX4-202ENST00000466154 ZKSCAN2Q63HK3 967 aa20.92■□□□□ 0.94
SLX4-202ENST00000466154 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
SLX4-202ENST00000466154 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
SLX4-202ENST00000466154 PIK3C2BO00750 1634 aa20.92■□□□□ 0.94
SLX4-202ENST00000466154 ATAD2Q6PL18 1390 aa20.91■□□□□ 0.94
SLX4-202ENST00000466154 DZIP1LQ8IYY4 767 aaKnown RBP20.91■□□□□ 0.94
SLX4-202ENST00000466154 ZRANB1Q9UGI0 708 aa20.91■□□□□ 0.94
SLX4-202ENST00000466154 ABCC11Q96J66 1382 aa20.9■□□□□ 0.94
SLX4-202ENST00000466154 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
SLX4-202ENST00000466154 PDZRN3Q9UPQ7 1066 aa20.9■□□□□ 0.94
SLX4-202ENST00000466154 PRKAR2BP31323 418 aa20.9■□□□□ 0.94
SLX4-202ENST00000466154 PMFBP1Q8TBY8 1022 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms