RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 ABCA6Q8N139 1617 aa8.72□□□□□ -1.01
CHMP3-206ENST00000466032 RNF17Q9BXT8 1623 aaKnown RBP8.72□□□□□ -1.01
CHMP3-206ENST00000466032 PRDM15P57071 1507 aaPredicted RBP8.71□□□□□ -1.01
CHMP3-206ENST00000466032 LMTK2Q8IWU2 1503 aa8.71□□□□□ -1.01
CHMP3-206ENST00000466032 IQGAP3Q86VI3 1631 aa8.71□□□□□ -1.02
CHMP3-206ENST00000466032 RPRD2Q5VT52 1461 aaKnown RBP8.7□□□□□ -1.02
CHMP3-206ENST00000466032 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
CHMP3-206ENST00000466032 VWDEQ8N2E2 1590 aa8.7□□□□□ -1.02
CHMP3-206ENST00000466032 ZNF787Q6DD87 383 aa8.7□□□□□ -1.02
CHMP3-206ENST00000466032 YEATS2Q9ULM3 1422 aa8.7□□□□□ -1.02
CHMP3-206ENST00000466032 PZPP20742 1482 aa8.7□□□□□ -1.02
CHMP3-206ENST00000466032 ZC3H13Q5T200 1668 aaKnown RBP8.69□□□□□ -1.02
CHMP3-206ENST00000466032 PKD2Q13563 968 aa8.69□□□□□ -1.02
CHMP3-206ENST00000466032 KHSRPQ92945 711 aaKnown RBP eCLIP8.69□□□□□ -1.02
CHMP3-206ENST00000466032 STAC3Q96MF2 364 aa8.69□□□□□ -1.02
CHMP3-206ENST00000466032 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
CHMP3-206ENST00000466032 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
CHMP3-206ENST00000466032 WASHC2CQ9Y4E1 1318 aa8.69□□□□□ -1.02
CHMP3-206ENST00000466032 ANKRD30BQ9BXX2 1392 aa8.68□□□□□ -1.02
CHMP3-206ENST00000466032 ARHGAP31Q2M1Z3 1444 aa8.68□□□□□ -1.02
CHMP3-206ENST00000466032 CNTLNQ9NXG0 1405 aa8.68□□□□□ -1.02
CHMP3-206ENST00000466032 TET3O43151 1660 aa8.68□□□□□ -1.02
CHMP3-206ENST00000466032 GGT6Q6P531 493 aa8.67□□□□□ -1.02
CHMP3-206ENST00000466032 MROH1Q8NDA8 1641 aa8.65□□□□□ -1.03
CHMP3-206ENST00000466032 CCDC144AA2RUR9 1427 aa8.64□□□□□ -1.03
CHMP3-206ENST00000466032 PTPRTO14522 1441 aa8.64□□□□□ -1.03
CHMP3-206ENST00000466032 TONSLQ96HA7 1378 aa8.64□□□□□ -1.03
CHMP3-206ENST00000466032 ARID4BQ4LE39 1312 aaPredicted RBP8.64□□□□□ -1.03
CHMP3-206ENST00000466032 ARHGAP33O14559 1287 aa8.64□□□□□ -1.03
CHMP3-206ENST00000466032 ABCC3O15438 1527 aa8.64□□□□□ -1.03
CHMP3-206ENST00000466032 EFCAB6Q5THR3 1501 aa8.64□□□□□ -1.03
CHMP3-206ENST00000466032 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
CHMP3-206ENST00000466032 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
CHMP3-206ENST00000466032 NEURL4Q96JN8 1562 aa8.62□□□□□ -1.03
CHMP3-206ENST00000466032 TRPM2O94759 1503 aa8.61□□□□□ -1.03
CHMP3-206ENST00000466032 PTPN5P54829 565 aa8.61□□□□□ -1.03
CHMP3-206ENST00000466032 GFRA3O60609 400 aa8.6□□□□□ -1.03
CHMP3-206ENST00000466032 NEUROD1Q13562 356 aa8.6□□□□□ -1.03
CHMP3-206ENST00000466032 CAMSAP1Q5T5Y3 1602 aa8.6□□□□□ -1.03
CHMP3-206ENST00000466032 NPATQ14207 1427 aa8.6□□□□□ -1.03
CHMP3-206ENST00000466032 MROH2AA6NES4 1674 aa8.59□□□□□ -1.03
CHMP3-206ENST00000466032 E9PCH4 1651 aa8.59□□□□□ -1.03
CHMP3-206ENST00000466032 RPGRIP1LQ68CZ1 1315 aa8.59□□□□□ -1.03
CHMP3-206ENST00000466032 NOS1P29475 1434 aa8.59□□□□□ -1.03
CHMP3-206ENST00000466032 SPHKAPQ2M3C7 1700 aa8.59□□□□□ -1.03
CHMP3-206ENST00000466032 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
CHMP3-206ENST00000466032 PSEN1P49768 467 aa8.58□□□□□ -1.04
CHMP3-206ENST00000466032 SIN3AQ96ST3 1273 aa8.58□□□□□ -1.04
CHMP3-206ENST00000466032 ZMYM3Q14202 1370 aa8.58□□□□□ -1.04
CHMP3-206ENST00000466032 PLA2R1Q13018 1463 aa8.57□□□□□ -1.04
CHMP3-206ENST00000466032 CEP152O94986 1710 aa8.57□□□□□ -1.04
CHMP3-206ENST00000466032 HDGFP51858 240 aaKnown RBP8.57□□□□□ -1.04
CHMP3-206ENST00000466032 LCE2AQ5TA79 106 aaPredicted RBP8.57□□□□□ -1.04
CHMP3-206ENST00000466032 MLECQ14165 292 aa8.56□□□□□ -1.04
CHMP3-206ENST00000466032 PLCD3Q8N3E9 789 aa8.56□□□□□ -1.04
CHMP3-206ENST00000466032 LHX6Q9UPM6 363 aa8.56□□□□□ -1.04
CHMP3-206ENST00000466032 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
CHMP3-206ENST00000466032 ERVK-7P63135 1459 aa8.55□□□□□ -1.04
CHMP3-206ENST00000466032 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
CHMP3-206ENST00000466032 NLRP1Q9C000 1473 aa8.54□□□□□ -1.04
CHMP3-206ENST00000466032 L3MBTL2Q969R5 705 aa8.54□□□□□ -1.04
CHMP3-206ENST00000466032 UHRF1BP1Q6BDS2 1440 aa8.54□□□□□ -1.04
CHMP3-206ENST00000466032 SPATA31E1Q6ZUB1 1445 aa8.54□□□□□ -1.04
CHMP3-206ENST00000466032 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
CHMP3-206ENST00000466032 PREX1Q8TCU6 1659 aa8.53□□□□□ -1.04
CHMP3-206ENST00000466032 KIF1BO60333 1816 aa8.53□□□□□ -1.04
CHMP3-206ENST00000466032 VGFO15240 615 aaPredicted RBP8.53□□□□□ -1.04
CHMP3-206ENST00000466032 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
CHMP3-206ENST00000466032 PIK3C2BO00750 1634 aa8.53□□□□□ -1.04
CHMP3-206ENST00000466032 TNRQ92752 1358 aa8.52□□□□□ -1.05
CHMP3-206ENST00000466032 NRG2O14511 850 aaPredicted RBP8.52□□□□□ -1.05
CHMP3-206ENST00000466032 IDI1Q13907 227 aa8.52□□□□□ -1.05
CHMP3-206ENST00000466032 DMRTA1Q5VZB9 504 aa8.52□□□□□ -1.05
CHMP3-206ENST00000466032 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
CHMP3-206ENST00000466032 DCAF11Q8TEB1 546 aa8.52□□□□□ -1.05
CHMP3-206ENST00000466032 FER1L4A9Z1Z3 1794 aa8.52□□□□□ -1.05
CHMP3-206ENST00000466032 SIGLEC1Q9BZZ2 1709 aa8.51□□□□□ -1.05
CHMP3-206ENST00000466032 CLTCL1P53675 1640 aa8.51□□□□□ -1.05
CHMP3-206ENST00000466032 ADAMTSL3P82987 1691 aa8.51□□□□□ -1.05
CHMP3-206ENST00000466032 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
CHMP3-206ENST00000466032 MICALL2Q8IY33 904 aa8.51□□□□□ -1.05
CHMP3-206ENST00000466032 ZFYVE9O95405 1425 aa8.51□□□□□ -1.05
CHMP3-206ENST00000466032 MYOM2P54296 1465 aa8.51□□□□□ -1.05
CHMP3-206ENST00000466032 ADGRB3O60242 1522 aa8.5□□□□□ -1.05
CHMP3-206ENST00000466032 SYNMO15061 1565 aa8.5□□□□□ -1.05
CHMP3-206ENST00000466032 NUDT7P0C024 238 aa8.5□□□□□ -1.05
CHMP3-206ENST00000466032 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
CHMP3-206ENST00000466032 RGL3Q3MIN7 710 aa8.49□□□□□ -1.05
CHMP3-206ENST00000466032 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
CHMP3-206ENST00000466032 FBXO31Q5XUX0 539 aaPredicted RBP8.49□□□□□ -1.05
CHMP3-206ENST00000466032 THSD4Q6ZMP0 1018 aa8.49□□□□□ -1.05
CHMP3-206ENST00000466032 THEMISQ8N1K5 641 aaPredicted RBP8.49□□□□□ -1.05
CHMP3-206ENST00000466032 CHGAP10645 457 aaKnown RBP8.48□□□□□ -1.05
CHMP3-206ENST00000466032 STK17AQ9UEE5 414 aa8.48□□□□□ -1.05
CHMP3-206ENST00000466032 PRAG1Q86YV5 1406 aa8.47□□□□□ -1.05
CHMP3-206ENST00000466032 C3P01024 1663 aa8.47□□□□□ -1.05
CHMP3-206ENST00000466032 EIF4G2P78344 907 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHMP3-206ENST00000466032 TMEM131LA2VDJ0 1609 aa8.47□□□□□ -1.05
CHMP3-206ENST00000466032 MADDQ8WXG6 1647 aa8.47□□□□□ -1.05
CHMP3-206ENST00000466032 CFAP65Q6ZU64 1925 aaKnown RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms