RNA–Protein interactions for RNA: ENST00000465957.1

HPS1-207, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-207ENST00000465957 ABCC11Q96J66 1382 aa23.97■■□□□ 1.43
HPS1-207ENST00000465957 C14orf93Q9H972 538 aaKnown RBP23.97■■□□□ 1.43
HPS1-207ENST00000465957 PLEKHH1Q9ULM0 1364 aa23.97■■□□□ 1.43
HPS1-207ENST00000465957 CFAP70Q5T0N1 1121 aa23.96■■□□□ 1.43
HPS1-207ENST00000465957 YTHDC2Q9H6S0 1430 aaKnown RBP23.95■■□□□ 1.42
HPS1-207ENST00000465957 HRCP23327 699 aa23.95■■□□□ 1.42
HPS1-207ENST00000465957 NUTM2FA1L443 756 aa23.94■■□□□ 1.42
HPS1-207ENST00000465957 NRXN1Q9ULB1 1477 aa23.94■■□□□ 1.42
HPS1-207ENST00000465957 PNPLA6Q8IY17 1366 aa23.93■■□□□ 1.42
HPS1-207ENST00000465957 ESCO1Q5FWF5 840 aa23.93■■□□□ 1.42
HPS1-207ENST00000465957 MYOM2P54296 1465 aa23.93■■□□□ 1.42
HPS1-207ENST00000465957 CDC42BPGQ6DT37 1551 aa23.92■■□□□ 1.42
HPS1-207ENST00000465957 SOS2Q07890 1332 aaPredicted RBP23.91■■□□□ 1.42
HPS1-207ENST00000465957 LAMC1P11047 1609 aa23.91■■□□□ 1.42
HPS1-207ENST00000465957 KNDC1Q76NI1 1749 aa23.9■■□□□ 1.42
HPS1-207ENST00000465957 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
HPS1-207ENST00000465957 ZNF772Q68DY9 489 aaPredicted RBP23.9■■□□□ 1.42
HPS1-207ENST00000465957 PIAS4Q8N2W9 510 aaPredicted RBP23.9■■□□□ 1.42
HPS1-207ENST00000465957 KDM2AQ9Y2K7 1162 aa23.88■■□□□ 1.41
HPS1-207ENST00000465957 DHX57Q6P158 1386 aaKnown RBP23.88■■□□□ 1.41
HPS1-207ENST00000465957 SIRT1Q96EB6 747 aa23.87■■□□□ 1.41
HPS1-207ENST00000465957 AFF2P51816 1311 aa23.86■■□□□ 1.41
HPS1-207ENST00000465957 FOXO3O43524 673 aa23.86■■□□□ 1.41
HPS1-207ENST00000465957 XPCQ01831 940 aaPredicted RBP23.86■■□□□ 1.41
HPS1-207ENST00000465957 DCAF11Q8TEB1 546 aa23.86■■□□□ 1.41
HPS1-207ENST00000465957 SAFB2Q14151 953 aaKnown RBP eCLIP23.85■■□□□ 1.41
HPS1-207ENST00000465957 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
HPS1-207ENST00000465957 ADAMTS2O95450 1211 aa23.84■■□□□ 1.41
HPS1-207ENST00000465957 PRAM1Q96QH2 718 aa23.83■■□□□ 1.41
HPS1-207ENST00000465957 NPHP3Q7Z494 1330 aa23.83■■□□□ 1.4
HPS1-207ENST00000465957 FMN2Q9NZ56 1722 aa23.81■■□□□ 1.4
HPS1-207ENST00000465957 PXDNQ92626 1479 aa23.8■■□□□ 1.4
HPS1-207ENST00000465957 RXRBP28702 533 aa23.79■■□□□ 1.4
HPS1-207ENST00000465957 NGLY1Q96IV0 654 aa23.79■■□□□ 1.4
HPS1-207ENST00000465957 POGKQ9P215 609 aa23.79■■□□□ 1.4
HPS1-207ENST00000465957 TRAK1Q9UPV9 953 aa23.79■■□□□ 1.4
HPS1-207ENST00000465957 ADGRB1O14514 1584 aa23.78■■□□□ 1.4
HPS1-207ENST00000465957 QTRT2Q9H974 415 aaKnown RBP23.75■■□□□ 1.39
HPS1-207ENST00000465957 DLC1Q96QB1 1528 aa23.74■■□□□ 1.39
HPS1-207ENST00000465957 MSH5O43196 834 aa23.74■■□□□ 1.39
HPS1-207ENST00000465957 COL22A1Q8NFW1 1626 aaPredicted RBP23.73■■□□□ 1.39
HPS1-207ENST00000465957 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
HPS1-207ENST00000465957 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
HPS1-207ENST00000465957 HIRIP3Q9BW71 556 aaPredicted RBP23.73■■□□□ 1.39
HPS1-207ENST00000465957 PHF8Q9UPP1 1060 aa23.73■■□□□ 1.39
HPS1-207ENST00000465957 KRT28Q7Z3Y7 464 aa23.72■■□□□ 1.39
HPS1-207ENST00000465957 MINK1Q8N4C8 1332 aaPredicted RBP23.7■■□□□ 1.38
HPS1-207ENST00000465957 KIF1AQ12756 1690 aa23.7■■□□□ 1.38
HPS1-207ENST00000465957 SPATA31A3Q5VYP0 1347 aa23.69■■□□□ 1.38
HPS1-207ENST00000465957 USP21Q9UK80 565 aa23.69■■□□□ 1.38
HPS1-207ENST00000465957 RBM6P78332 1123 aaKnown RBP23.68■■□□□ 1.38
HPS1-207ENST00000465957 FNBP4Q8N3X1 1017 aaPredicted RBP23.67■■□□□ 1.38
HPS1-207ENST00000465957 PMFBP1Q8TBY8 1022 aa23.67■■□□□ 1.38
HPS1-207ENST00000465957 CDK12Q9NYV4 1490 aaPredicted RBP23.66■■□□□ 1.38
HPS1-207ENST00000465957 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
HPS1-207ENST00000465957 ADGRB2O60241 1585 aa23.65■■□□□ 1.38
HPS1-207ENST00000465957 PLEKHG5O94827 1062 aa23.64■■□□□ 1.37
HPS1-207ENST00000465957 PSME1Q06323 249 aa23.64■■□□□ 1.37
HPS1-207ENST00000465957 UPF1Q92900 1129 aaKnown RBP eCLIP23.64■■□□□ 1.37
HPS1-207ENST00000465957 RGS12O14924 1447 aa23.63■■□□□ 1.37
HPS1-207ENST00000465957 ANKARQ7Z5J8 1434 aa23.63■■□□□ 1.37
HPS1-207ENST00000465957 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
HPS1-207ENST00000465957 WASLO00401 505 aaPredicted RBP23.62■■□□□ 1.37
HPS1-207ENST00000465957 CABLES1Q8TDN4 633 aa23.62■■□□□ 1.37
HPS1-207ENST00000465957 TRPC5Q9UL62 973 aaPredicted RBP23.62■■□□□ 1.37
HPS1-207ENST00000465957 LMOD2Q6P5Q4 547 aa23.61■■□□□ 1.37
HPS1-207ENST00000465957 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
HPS1-207ENST00000465957 TNS3Q68CZ2 1445 aa23.6■■□□□ 1.37
HPS1-207ENST00000465957 MARF1Q9Y4F3 1742 aaKnown RBP23.59■■□□□ 1.37
HPS1-207ENST00000465957 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
HPS1-207ENST00000465957 BCL9LQ86UU0 1499 aa23.59■■□□□ 1.37
HPS1-207ENST00000465957 ARHGEF28Q8N1W1 1705 aaKnown RBP23.59■■□□□ 1.37
HPS1-207ENST00000465957 SBNO1A3KN83 1393 aa23.58■■□□□ 1.37
HPS1-207ENST00000465957 ATRNO75882 1429 aa23.58■■□□□ 1.36
HPS1-207ENST00000465957 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
HPS1-207ENST00000465957 TULP4Q9NRJ4 1543 aa23.56■■□□□ 1.36
HPS1-207ENST00000465957 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
HPS1-207ENST00000465957 HAP1P54257 671 aaPredicted RBP23.55■■□□□ 1.36
HPS1-207ENST00000465957 L3MBTL2Q969R5 705 aa23.53■■□□□ 1.36
HPS1-207ENST00000465957 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
HPS1-207ENST00000465957 ARHGEF10O15013 1369 aa23.52■■□□□ 1.36
HPS1-207ENST00000465957 NGDNQ8NEJ9 315 aaKnown RBP23.52■■□□□ 1.36
HPS1-207ENST00000465957 NUDT16Q96DE0 195 aaKnown RBP23.52■■□□□ 1.36
HPS1-207ENST00000465957 CDK19Q9BWU1 502 aa23.52■■□□□ 1.36
HPS1-207ENST00000465957 GPRASP1Q5JY77 1395 aa23.52■■□□□ 1.36
HPS1-207ENST00000465957 SLIT2O94813 1529 aa23.51■■□□□ 1.35
HPS1-207ENST00000465957 UNC5CLQ8IV45 518 aa23.51■■□□□ 1.35
HPS1-207ENST00000465957 GJD4Q96KN9 370 aaPredicted RBP23.51■■□□□ 1.35
HPS1-207ENST00000465957 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
HPS1-207ENST00000465957 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
HPS1-207ENST00000465957 ATP7BP35670 1465 aa23.49■■□□□ 1.35
HPS1-207ENST00000465957 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
HPS1-207ENST00000465957 ABCA3Q99758 1704 aa23.47■■□□□ 1.35
HPS1-207ENST00000465957 FAM83GA6ND36 823 aa23.46■■□□□ 1.35
HPS1-207ENST00000465957 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.45■■□□□ 1.34
HPS1-207ENST00000465957 ALS2Q96Q42 1657 aa23.44■■□□□ 1.34
HPS1-207ENST00000465957 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
HPS1-207ENST00000465957 ATAD2Q6PL18 1390 aa23.43■■□□□ 1.34
HPS1-207ENST00000465957 EP400Q96L91 3159 aa23.43■■□□□ 1.34
HPS1-207ENST00000465957 GLI3P10071 1580 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms