RNA–Protein interactions for RNA: ENST00000465818.5

VPS8-218, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 572 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-218ENST00000465818 CEP152O94986 1710 aa11.35□□□□□ -0.59
VPS8-218ENST00000465818 RAB3GAP2Q9H2M9 1393 aa11.35□□□□□ -0.59
VPS8-218ENST00000465818 TRIM66O15016 1216 aa11.34□□□□□ -0.59
VPS8-218ENST00000465818 AGLP35573 1532 aa11.34□□□□□ -0.59
VPS8-218ENST00000465818 FOXK1P85037 733 aa11.33□□□□□ -0.6
VPS8-218ENST00000465818 IQGAP3Q86VI3 1631 aa11.33□□□□□ -0.6
VPS8-218ENST00000465818 DHX29Q7Z478 1369 aaKnown RBP11.32□□□□□ -0.6
VPS8-218ENST00000465818 KDM5DQ9BY66 1539 aa11.32□□□□□ -0.6
VPS8-218ENST00000465818 KDM4CQ9H3R0 1056 aa11.32□□□□□ -0.6
VPS8-218ENST00000465818 ZC3H13Q5T200 1668 aaKnown RBP11.32□□□□□ -0.6
VPS8-218ENST00000465818 SPDYE16A6NNV3 312 aaPredicted RBP11.31□□□□□ -0.6
VPS8-218ENST00000465818 KIF3CO14782 793 aa11.31□□□□□ -0.6
VPS8-218ENST00000465818 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
VPS8-218ENST00000465818 FER1L4A9Z1Z3 1794 aa11.31□□□□□ -0.6
VPS8-218ENST00000465818 VWDEQ8N2E2 1590 aa11.3□□□□□ -0.6
VPS8-218ENST00000465818 KRI1Q8N9T8 703 aaKnown RBP11.3□□□□□ -0.6
VPS8-218ENST00000465818 TET3O43151 1660 aa11.3□□□□□ -0.6
VPS8-218ENST00000465818 CAMSAP1Q5T5Y3 1602 aa11.29□□□□□ -0.6
VPS8-218ENST00000465818 PDE4DQ08499 809 aa11.29□□□□□ -0.6
VPS8-218ENST00000465818 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
VPS8-218ENST00000465818 CLTCQ00610 1675 aaKnown RBP11.29□□□□□ -0.6
VPS8-218ENST00000465818 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
VPS8-218ENST00000465818 PZPP20742 1482 aa11.27□□□□□ -0.6
VPS8-218ENST00000465818 ABCC3O15438 1527 aa11.27□□□□□ -0.61
VPS8-218ENST00000465818 C2orf72A6NCS6 295 aa11.27□□□□□ -0.61
VPS8-218ENST00000465818 ATN1P54259 1190 aaPredicted RBP11.27□□□□□ -0.61
VPS8-218ENST00000465818 IRX5P78411 483 aaPredicted RBP11.27□□□□□ -0.61
VPS8-218ENST00000465818 PLPP6Q8IY26 295 aa11.27□□□□□ -0.61
VPS8-218ENST00000465818 E9PCH4 1651 aa11.27□□□□□ -0.61
VPS8-218ENST00000465818 EFCAB6Q5THR3 1501 aa11.26□□□□□ -0.61
VPS8-218ENST00000465818 KIF3BO15066 747 aa11.26□□□□□ -0.61
VPS8-218ENST00000465818 EVX2Q03828 476 aa11.26□□□□□ -0.61
VPS8-218ENST00000465818 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
VPS8-218ENST00000465818 MROH2AA6NES4 1674 aa11.25□□□□□ -0.61
VPS8-218ENST00000465818 TMC2Q8TDI7 906 aa11.25□□□□□ -0.61
VPS8-218ENST00000465818 RIMS1Q86UR5 1692 aaKnown RBP11.24□□□□□ -0.61
VPS8-218ENST00000465818 LMTK2Q8IWU2 1503 aa11.24□□□□□ -0.61
VPS8-218ENST00000465818 ADAMTSL3P82987 1691 aa11.24□□□□□ -0.61
VPS8-218ENST00000465818 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
VPS8-218ENST00000465818 TMEM92Q6UXU6 159 aa11.23□□□□□ -0.61
VPS8-218ENST00000465818 NUP155O75694 1391 aa11.23□□□□□ -0.61
VPS8-218ENST00000465818 CFAP65Q6ZU64 1925 aaKnown RBP11.23□□□□□ -0.61
VPS8-218ENST00000465818 KANK1Q14678 1352 aa11.22□□□□□ -0.61
VPS8-218ENST00000465818 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
VPS8-218ENST00000465818 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
VPS8-218ENST00000465818 C3P01024 1663 aa11.21□□□□□ -0.61
VPS8-218ENST00000465818 PREX1Q8TCU6 1659 aa11.21□□□□□ -0.61
VPS8-218ENST00000465818 DHX57Q6P158 1386 aaKnown RBP11.21□□□□□ -0.61
VPS8-218ENST00000465818 OSBPP22059 807 aa11.21□□□□□ -0.61
VPS8-218ENST00000465818 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
VPS8-218ENST00000465818 FAM117AQ9C073 453 aa11.21□□□□□ -0.61
VPS8-218ENST00000465818 GRXCR2A6NFK2 248 aa11.2□□□□□ -0.62
VPS8-218ENST00000465818 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
VPS8-218ENST00000465818 FECHP22830 423 aa11.2□□□□□ -0.62
VPS8-218ENST00000465818 HRCP23327 699 aa11.2□□□□□ -0.62
VPS8-218ENST00000465818 MLECQ14165 292 aa11.2□□□□□ -0.62
VPS8-218ENST00000465818 GGT6Q6P531 493 aa11.2□□□□□ -0.62
VPS8-218ENST00000465818 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
VPS8-218ENST00000465818 HOMEZQ8IX15 550 aa11.19□□□□□ -0.62
VPS8-218ENST00000465818 ACIN1Q9UKV3 1341 aaKnown RBP11.18□□□□□ -0.62
VPS8-218ENST00000465818 PLEKHG3A1L390 1219 aa11.18□□□□□ -0.62
VPS8-218ENST00000465818 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
VPS8-218ENST00000465818 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
VPS8-218ENST00000465818 NPATQ14207 1427 aa11.17□□□□□ -0.62
VPS8-218ENST00000465818 CNTLNQ9NXG0 1405 aa11.17□□□□□ -0.62
VPS8-218ENST00000465818 SYNMO15061 1565 aa11.16□□□□□ -0.62
VPS8-218ENST00000465818 TRPM2O94759 1503 aa11.16□□□□□ -0.62
VPS8-218ENST00000465818 ASTLQ6HA08 431 aaPredicted RBP11.16□□□□□ -0.62
VPS8-218ENST00000465818 OCEL1Q9H607 264 aa11.16□□□□□ -0.62
VPS8-218ENST00000465818 CLTCL1P53675 1640 aa11.16□□□□□ -0.62
VPS8-218ENST00000465818 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
VPS8-218ENST00000465818 WASHC2CQ9Y4E1 1318 aa11.15□□□□□ -0.62
VPS8-218ENST00000465818 IRF6O14896 467 aa11.15□□□□□ -0.62
VPS8-218ENST00000465818 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
VPS8-218ENST00000465818 MAP2K5Q13163 448 aa11.15□□□□□ -0.62
VPS8-218ENST00000465818 OXER1Q8TDS5 423 aa11.15□□□□□ -0.62
VPS8-218ENST00000465818 UPF1Q92900 1129 aaKnown RBP eCLIP11.15□□□□□ -0.62
VPS8-218ENST00000465818 MPHOSPH9Q99550 1183 aa11.15□□□□□ -0.62
VPS8-218ENST00000465818 ERVK-7P63135 1459 aa11.14□□□□□ -0.63
VPS8-218ENST00000465818 PIK3C2BO00750 1634 aa11.14□□□□□ -0.63
VPS8-218ENST00000465818 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
VPS8-218ENST00000465818 ARHGAP31Q2M1Z3 1444 aa11.14□□□□□ -0.63
VPS8-218ENST00000465818 SPATA31D1Q6ZQQ2 1576 aa11.14□□□□□ -0.63
VPS8-218ENST00000465818 UGGT1Q9NYU2 1555 aa11.13□□□□□ -0.63
VPS8-218ENST00000465818 PTGER2P43116 358 aa11.13□□□□□ -0.63
VPS8-218ENST00000465818 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
VPS8-218ENST00000465818 MYO5BQ9ULV0 1848 aa11.13□□□□□ -0.63
VPS8-218ENST00000465818 MYO3AQ8NEV4 1616 aa11.13□□□□□ -0.63
VPS8-218ENST00000465818 KIF1BO60333 1816 aa11.12□□□□□ -0.63
VPS8-218ENST00000465818 AMHR2Q16671 573 aa11.12□□□□□ -0.63
VPS8-218ENST00000465818 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
VPS8-218ENST00000465818 IER5LQ5T953 404 aa11.11□□□□□ -0.63
VPS8-218ENST00000465818 CCER1Q8TC90 406 aaPredicted RBP11.11□□□□□ -0.63
VPS8-218ENST00000465818 DDX12PQ92771 950 aa11.11□□□□□ -0.63
VPS8-218ENST00000465818 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
VPS8-218ENST00000465818 PTPRTO14522 1441 aa11.1□□□□□ -0.63
VPS8-218ENST00000465818 NOS1P29475 1434 aa11.1□□□□□ -0.63
VPS8-218ENST00000465818 GNPATO15228 680 aa11.1□□□□□ -0.63
VPS8-218ENST00000465818 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
VPS8-218ENST00000465818 PTPRMP28827 1452 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms