RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 STK26Q9P289 416 aa15.6■□□□□ 0.09
GPNMB-206ENST00000465673 TRPC5Q9UL62 973 aaPredicted RBP15.6■□□□□ 0.09
GPNMB-206ENST00000465673 WAPLQ7Z5K2 1190 aa15.59■□□□□ 0.09
GPNMB-206ENST00000465673 RPGRIP1LQ68CZ1 1315 aa15.59■□□□□ 0.09
GPNMB-206ENST00000465673 ADGRF5Q8IZF2 1346 aa15.59■□□□□ 0.09
GPNMB-206ENST00000465673 ATAD2Q6PL18 1390 aa15.58■□□□□ 0.08
GPNMB-206ENST00000465673 HFM1A2PYH4 1435 aa15.58■□□□□ 0.08
GPNMB-206ENST00000465673 ATRNO75882 1429 aa15.58■□□□□ 0.08
GPNMB-206ENST00000465673 SRCAPQ6ZRS2 3230 aa15.58■□□□□ 0.08
GPNMB-206ENST00000465673 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
GPNMB-206ENST00000465673 PRAG1Q86YV5 1406 aa15.57■□□□□ 0.08
GPNMB-206ENST00000465673 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
GPNMB-206ENST00000465673 NPHP3Q7Z494 1330 aa15.56■□□□□ 0.08
GPNMB-206ENST00000465673 MYOM2P54296 1465 aa15.56■□□□□ 0.08
GPNMB-206ENST00000465673 BCL9LQ86UU0 1499 aa15.56■□□□□ 0.08
GPNMB-206ENST00000465673 PXDNQ92626 1479 aa15.56■□□□□ 0.08
GPNMB-206ENST00000465673 PPLO60437 1756 aa15.56■□□□□ 0.08
GPNMB-206ENST00000465673 COL22A1Q8NFW1 1626 aaPredicted RBP15.55■□□□□ 0.08
GPNMB-206ENST00000465673 PLEKHH1Q9ULM0 1364 aa15.55■□□□□ 0.08
GPNMB-206ENST00000465673 CDC42BPGQ6DT37 1551 aa15.53■□□□□ 0.08
GPNMB-206ENST00000465673 PLEKHG5O94827 1062 aa15.52■□□□□ 0.08
GPNMB-206ENST00000465673 GJD4Q96KN9 370 aaPredicted RBP15.52■□□□□ 0.08
GPNMB-206ENST00000465673 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
GPNMB-206ENST00000465673 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
GPNMB-206ENST00000465673 EP400Q96L91 3159 aa15.49■□□□□ 0.07
GPNMB-206ENST00000465673 SPATA31A3Q5VYP0 1347 aa15.48■□□□□ 0.07
GPNMB-206ENST00000465673 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
GPNMB-206ENST00000465673 SPATA31E1Q6ZUB1 1445 aa15.48■□□□□ 0.07
GPNMB-206ENST00000465673 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
GPNMB-206ENST00000465673 TECPR2O15040 1411 aa15.47■□□□□ 0.07
GPNMB-206ENST00000465673 KRT28Q7Z3Y7 464 aa15.47■□□□□ 0.07
GPNMB-206ENST00000465673 UNC5CLQ8IV45 518 aa15.47■□□□□ 0.07
GPNMB-206ENST00000465673 MARF1Q9Y4F3 1742 aaKnown RBP15.47■□□□□ 0.07
GPNMB-206ENST00000465673 ABCC11Q96J66 1382 aa15.47■□□□□ 0.07
GPNMB-206ENST00000465673 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
GPNMB-206ENST00000465673 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.06
GPNMB-206ENST00000465673 GLI3P10071 1580 aa15.45■□□□□ 0.06
GPNMB-206ENST00000465673 SLIT2O94813 1529 aa15.45■□□□□ 0.06
GPNMB-206ENST00000465673 DEFB132Q7Z7B7 95 aa15.45■□□□□ 0.06
GPNMB-206ENST00000465673 YTHDC2Q9H6S0 1430 aaKnown RBP15.44■□□□□ 0.06
GPNMB-206ENST00000465673 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
GPNMB-206ENST00000465673 CCDC125Q86Z20 511 aa15.44■□□□□ 0.06
GPNMB-206ENST00000465673 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
GPNMB-206ENST00000465673 PIK3C2GO75747 1445 aa15.43■□□□□ 0.06
GPNMB-206ENST00000465673 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
GPNMB-206ENST00000465673 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
GPNMB-206ENST00000465673 HAP1P54257 671 aaPredicted RBP15.42■□□□□ 0.06
GPNMB-206ENST00000465673 CFAP70Q5T0N1 1121 aa15.42■□□□□ 0.06
GPNMB-206ENST00000465673 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
GPNMB-206ENST00000465673 PHF8Q9UPP1 1060 aa15.42■□□□□ 0.06
GPNMB-206ENST00000465673 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
GPNMB-206ENST00000465673 RGPD8O14715 1765 aaPredicted RBP15.41■□□□□ 0.06
GPNMB-206ENST00000465673 KNDC1Q76NI1 1749 aa15.4■□□□□ 0.06
GPNMB-206ENST00000465673 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.4■□□□□ 0.06
GPNMB-206ENST00000465673 USP32Q8NFA0 1604 aa15.4■□□□□ 0.06
GPNMB-206ENST00000465673 C14orf93Q9H972 538 aaKnown RBP15.4■□□□□ 0.06
GPNMB-206ENST00000465673 CCDC9Q9Y3X0 531 aaKnown RBP15.4■□□□□ 0.06
GPNMB-206ENST00000465673 BRWD3Q6RI45 1802 aa15.4■□□□□ 0.06
GPNMB-206ENST00000465673 PMFBP1Q8TBY8 1022 aa15.39■□□□□ 0.05
GPNMB-206ENST00000465673 PRAM1Q96QH2 718 aa15.39■□□□□ 0.05
GPNMB-206ENST00000465673 BLMP54132 1417 aaPredicted RBP15.39■□□□□ 0.05
GPNMB-206ENST00000465673 KIF1AQ12756 1690 aa15.38■□□□□ 0.05
GPNMB-206ENST00000465673 TNS3Q68CZ2 1445 aa15.38■□□□□ 0.05
GPNMB-206ENST00000465673 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
GPNMB-206ENST00000465673 VPS72Q15906 364 aa15.38■□□□□ 0.05
GPNMB-206ENST00000465673 SIRT1Q96EB6 747 aa15.38■□□□□ 0.05
GPNMB-206ENST00000465673 PSME1Q06323 249 aa15.37■□□□□ 0.05
GPNMB-206ENST00000465673 NRXN1Q9ULB1 1477 aa15.35■□□□□ 0.05
GPNMB-206ENST00000465673 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
GPNMB-206ENST00000465673 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
GPNMB-206ENST00000465673 ONECUT3O60422 494 aaPredicted RBP15.34■□□□□ 0.05
GPNMB-206ENST00000465673 SF3B2Q13435 895 aaKnown RBP15.34■□□□□ 0.05
GPNMB-206ENST00000465673 KRT27Q7Z3Y8 459 aa15.34■□□□□ 0.05
GPNMB-206ENST00000465673 POGKQ9P215 609 aa15.34■□□□□ 0.05
GPNMB-206ENST00000465673 PLCH1Q4KWH8 1693 aa15.34■□□□□ 0.05
GPNMB-206ENST00000465673 SBNO1A3KN83 1393 aa15.34■□□□□ 0.05
GPNMB-206ENST00000465673 A0A0G2JS52 829 aa15.33■□□□□ 0.04
GPNMB-206ENST00000465673 MYT1Q01538 1121 aa15.33■□□□□ 0.04
GPNMB-206ENST00000465673 FAM98CQ17RN3 349 aaKnown RBP15.33■□□□□ 0.04
GPNMB-206ENST00000465673 ABCA3Q99758 1704 aa15.32■□□□□ 0.04
GPNMB-206ENST00000465673 PSDA5PKW4 1024 aaPredicted RBP15.32■□□□□ 0.04
GPNMB-206ENST00000465673 FAM182BQ5T319 152 aa15.32■□□□□ 0.04
GPNMB-206ENST00000465673 BTG4Q9NY30 223 aa15.31■□□□□ 0.04
GPNMB-206ENST00000465673 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
GPNMB-206ENST00000465673 PRR36Q9H6K5 1346 aa15.31■□□□□ 0.04
GPNMB-206ENST00000465673 ARHGEF10O15013 1369 aa15.31■□□□□ 0.04
GPNMB-206ENST00000465673 MINK1Q8N4C8 1332 aaPredicted RBP15.3■□□□□ 0.04
GPNMB-206ENST00000465673 NWD2Q9ULI1 1742 aa15.29■□□□□ 0.04
GPNMB-206ENST00000465673 KDM2AQ9Y2K7 1162 aa15.29■□□□□ 0.04
GPNMB-206ENST00000465673 ANKARQ7Z5J8 1434 aa15.27■□□□□ 0.04
GPNMB-206ENST00000465673 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.04
GPNMB-206ENST00000465673 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
GPNMB-206ENST00000465673 TRPM3Q9HCF6 1732 aaPredicted RBP15.26■□□□□ 0.03
GPNMB-206ENST00000465673 ACIN1Q9UKV3 1341 aaKnown RBP15.26■□□□□ 0.03
GPNMB-206ENST00000465673 ADGRB1O14514 1584 aa15.26■□□□□ 0.03
GPNMB-206ENST00000465673 DLC1Q96QB1 1528 aa15.26■□□□□ 0.03
GPNMB-206ENST00000465673 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
GPNMB-206ENST00000465673 BAG6P46379 1132 aa15.25■□□□□ 0.03
GPNMB-206ENST00000465673 GPRASP1Q5JY77 1395 aa15.24■□□□□ 0.03
GPNMB-206ENST00000465673 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms