RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
GABRE-205ENST00000465405 WAPLQ7Z5K2 1190 aa12.94□□□□□ -0.34
GABRE-205ENST00000465405 CFAP70Q5T0N1 1121 aa12.93□□□□□ -0.34
GABRE-205ENST00000465405 C14orf93Q9H972 538 aaKnown RBP12.93□□□□□ -0.34
GABRE-205ENST00000465405 TECPR2O15040 1411 aa12.93□□□□□ -0.34
GABRE-205ENST00000465405 KNDC1Q76NI1 1749 aa12.93□□□□□ -0.34
GABRE-205ENST00000465405 PLEKHH1Q9ULM0 1364 aa12.93□□□□□ -0.34
GABRE-205ENST00000465405 SHPRHQ149N8 1683 aa12.93□□□□□ -0.34
GABRE-205ENST00000465405 LRP6O75581 1613 aa12.92□□□□□ -0.34
GABRE-205ENST00000465405 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
GABRE-205ENST00000465405 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
GABRE-205ENST00000465405 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
GABRE-205ENST00000465405 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
GABRE-205ENST00000465405 KDM2AQ9Y2K7 1162 aa12.91□□□□□ -0.34
GABRE-205ENST00000465405 LAMC1P11047 1609 aa12.91□□□□□ -0.34
GABRE-205ENST00000465405 CDC42BPGQ6DT37 1551 aa12.9□□□□□ -0.34
GABRE-205ENST00000465405 POTEAQ6S8J7 498 aa12.9□□□□□ -0.34
GABRE-205ENST00000465405 SPATA31A6Q5VVP1 1343 aa12.89□□□□□ -0.35
GABRE-205ENST00000465405 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
GABRE-205ENST00000465405 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
GABRE-205ENST00000465405 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
GABRE-205ENST00000465405 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
GABRE-205ENST00000465405 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
GABRE-205ENST00000465405 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
GABRE-205ENST00000465405 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
GABRE-205ENST00000465405 ADGRB1O14514 1584 aa12.86□□□□□ -0.35
GABRE-205ENST00000465405 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
GABRE-205ENST00000465405 SIRT1Q96EB6 747 aa12.86□□□□□ -0.35
GABRE-205ENST00000465405 FMN2Q9NZ56 1722 aa12.85□□□□□ -0.35
GABRE-205ENST00000465405 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
GABRE-205ENST00000465405 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
GABRE-205ENST00000465405 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
GABRE-205ENST00000465405 PRAM1Q96QH2 718 aa12.85□□□□□ -0.35
GABRE-205ENST00000465405 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
GABRE-205ENST00000465405 FOXO3O43524 673 aa12.83□□□□□ -0.36
GABRE-205ENST00000465405 TRAK1Q9UPV9 953 aa12.83□□□□□ -0.36
GABRE-205ENST00000465405 DLC1Q96QB1 1528 aa12.83□□□□□ -0.36
GABRE-205ENST00000465405 RGPD8O14715 1765 aaPredicted RBP12.82□□□□□ -0.36
GABRE-205ENST00000465405 XPCQ01831 940 aaPredicted RBP12.82□□□□□ -0.36
GABRE-205ENST00000465405 PXDNQ92626 1479 aa12.82□□□□□ -0.36
GABRE-205ENST00000465405 STAC3Q96MF2 364 aa12.81□□□□□ -0.36
GABRE-205ENST00000465405 POGKQ9P215 609 aa12.81□□□□□ -0.36
GABRE-205ENST00000465405 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
GABRE-205ENST00000465405 HIRIP3Q9BW71 556 aaPredicted RBP12.79□□□□□ -0.36
GABRE-205ENST00000465405 AFF2P51816 1311 aa12.79□□□□□ -0.36
GABRE-205ENST00000465405 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
GABRE-205ENST00000465405 COL22A1Q8NFW1 1626 aaPredicted RBP12.78□□□□□ -0.36
GABRE-205ENST00000465405 KIF1AQ12756 1690 aa12.78□□□□□ -0.36
GABRE-205ENST00000465405 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
GABRE-205ENST00000465405 ZNF772Q68DY9 489 aaPredicted RBP12.78□□□□□ -0.36
GABRE-205ENST00000465405 PPP4R3CPQ6ZMV5 832 aa12.78□□□□□ -0.36
GABRE-205ENST00000465405 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
GABRE-205ENST00000465405 C8orf37Q96NL8 207 aa12.78□□□□□ -0.36
GABRE-205ENST00000465405 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
GABRE-205ENST00000465405 ADGRB2O60241 1585 aa12.77□□□□□ -0.36
GABRE-205ENST00000465405 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.36
GABRE-205ENST00000465405 SIN3AQ96ST3 1273 aa12.77□□□□□ -0.37
GABRE-205ENST00000465405 PHF8Q9UPP1 1060 aa12.77□□□□□ -0.37
GABRE-205ENST00000465405 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
GABRE-205ENST00000465405 KRT28Q7Z3Y7 464 aa12.76□□□□□ -0.37
GABRE-205ENST00000465405 KIAA1210Q9ULL0 1709 aa12.76□□□□□ -0.37
GABRE-205ENST00000465405 PMFBP1Q8TBY8 1022 aa12.75□□□□□ -0.37
GABRE-205ENST00000465405 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
GABRE-205ENST00000465405 SPATA31A3Q5VYP0 1347 aa12.74□□□□□ -0.37
GABRE-205ENST00000465405 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
GABRE-205ENST00000465405 L3MBTL2Q969R5 705 aa12.74□□□□□ -0.37
GABRE-205ENST00000465405 NGLY1Q96IV0 654 aa12.74□□□□□ -0.37
GABRE-205ENST00000465405 WASLO00401 505 aaPredicted RBP12.73□□□□□ -0.37
GABRE-205ENST00000465405 RXRBP28702 533 aa12.73□□□□□ -0.37
GABRE-205ENST00000465405 NEUROD1Q13562 356 aa12.73□□□□□ -0.37
GABRE-205ENST00000465405 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
GABRE-205ENST00000465405 QTRT2Q9H974 415 aaKnown RBP12.72□□□□□ -0.37
GABRE-205ENST00000465405 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.37
GABRE-205ENST00000465405 PSME1Q06323 249 aa12.71□□□□□ -0.37
GABRE-205ENST00000465405 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.38
GABRE-205ENST00000465405 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
GABRE-205ENST00000465405 USP21Q9UK80 565 aa12.7□□□□□ -0.38
GABRE-205ENST00000465405 TRPM3Q9HCF6 1732 aaPredicted RBP12.69□□□□□ -0.38
GABRE-205ENST00000465405 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
GABRE-205ENST00000465405 CABLES1Q8TDN4 633 aa12.69□□□□□ -0.38
GABRE-205ENST00000465405 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
GABRE-205ENST00000465405 EIF3AQ14152 1382 aaKnown RBP12.69□□□□□ -0.38
GABRE-205ENST00000465405 ATP7BP35670 1465 aa12.68□□□□□ -0.38
GABRE-205ENST00000465405 RBM6P78332 1123 aaKnown RBP12.68□□□□□ -0.38
GABRE-205ENST00000465405 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
GABRE-205ENST00000465405 LMOD2Q6P5Q4 547 aa12.68□□□□□ -0.38
GABRE-205ENST00000465405 NUDT16Q96DE0 195 aaKnown RBP12.68□□□□□ -0.38
GABRE-205ENST00000465405 CDK19Q9BWU1 502 aa12.68□□□□□ -0.38
GABRE-205ENST00000465405 TRPM1Q7Z4N2 1603 aa12.68□□□□□ -0.38
GABRE-205ENST00000465405 BCL9LQ86UU0 1499 aa12.67□□□□□ -0.38
GABRE-205ENST00000465405 CDK12Q9NYV4 1490 aaPredicted RBP12.67□□□□□ -0.38
GABRE-205ENST00000465405 RGS12O14924 1447 aa12.67□□□□□ -0.38
GABRE-205ENST00000465405 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
GABRE-205ENST00000465405 ITSN1Q15811 1721 aa12.66□□□□□ -0.38
GABRE-205ENST00000465405 NGDNQ8NEJ9 315 aaKnown RBP12.66□□□□□ -0.38
GABRE-205ENST00000465405 ALS2Q96Q42 1657 aa12.66□□□□□ -0.38
GABRE-205ENST00000465405 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
GABRE-205ENST00000465405 ATRNO75882 1429 aa12.65□□□□□ -0.38
GABRE-205ENST00000465405 TOPAZ1Q8N9V7 1692 aa12.65□□□□□ -0.38
GABRE-205ENST00000465405 QRICH2Q9H0J4 1663 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms