RNA–Protein interactions for RNA: ENST00000465399.5

ATG4B-214, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-214ENST00000465399 ADAMTS2O95450 1211 aa21.2■□□□□ 0.98
ATG4B-214ENST00000465399 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
ATG4B-214ENST00000465399 NGLY1Q96IV0 654 aa21.2■□□□□ 0.98
ATG4B-214ENST00000465399 ADGRF5Q8IZF2 1346 aa21.2■□□□□ 0.98
ATG4B-214ENST00000465399 RBM6P78332 1123 aaKnown RBP21.19■□□□□ 0.98
ATG4B-214ENST00000465399 MPHOSPH9Q99550 1183 aa21.19■□□□□ 0.98
ATG4B-214ENST00000465399 QTRT2Q9H974 415 aaKnown RBP21.19■□□□□ 0.98
ATG4B-214ENST00000465399 TECPR2O15040 1411 aa21.19■□□□□ 0.98
ATG4B-214ENST00000465399 MARF1Q9Y4F3 1742 aaKnown RBP21.18■□□□□ 0.98
ATG4B-214ENST00000465399 RGS12O14924 1447 aa21.18■□□□□ 0.98
ATG4B-214ENST00000465399 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
ATG4B-214ENST00000465399 NPHP3Q7Z494 1330 aa21.17■□□□□ 0.98
ATG4B-214ENST00000465399 PIK3C2GO75747 1445 aa21.16■□□□□ 0.98
ATG4B-214ENST00000465399 FMN2Q9NZ56 1722 aa21.15■□□□□ 0.98
ATG4B-214ENST00000465399 LRPPRCP42704 1394 aaKnown RBP21.15■□□□□ 0.98
ATG4B-214ENST00000465399 STK26Q9P289 416 aa21.15■□□□□ 0.98
ATG4B-214ENST00000465399 PXDNQ92626 1479 aa21.14■□□□□ 0.98
ATG4B-214ENST00000465399 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
ATG4B-214ENST00000465399 ABCC11Q96J66 1382 aa21.13■□□□□ 0.97
ATG4B-214ENST00000465399 KIF1AQ12756 1690 aa21.13■□□□□ 0.97
ATG4B-214ENST00000465399 USP21Q9UK80 565 aa21.13■□□□□ 0.97
ATG4B-214ENST00000465399 WAPLQ7Z5K2 1190 aa21.12■□□□□ 0.97
ATG4B-214ENST00000465399 MYOM2P54296 1465 aa21.12■□□□□ 0.97
ATG4B-214ENST00000465399 TMEM132EQ6IEE7 984 aa21.11■□□□□ 0.97
ATG4B-214ENST00000465399 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
ATG4B-214ENST00000465399 TRPC5Q9UL62 973 aaPredicted RBP21.1■□□□□ 0.97
ATG4B-214ENST00000465399 NUTM2FA1L443 756 aa21.09■□□□□ 0.97
ATG4B-214ENST00000465399 FOXO3O43524 673 aa21.09■□□□□ 0.97
ATG4B-214ENST00000465399 FNBP4Q8N3X1 1017 aaPredicted RBP21.09■□□□□ 0.97
ATG4B-214ENST00000465399 RGPD8O14715 1765 aaPredicted RBP21.09■□□□□ 0.97
ATG4B-214ENST00000465399 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
ATG4B-214ENST00000465399 XPCQ01831 940 aaPredicted RBP21.07■□□□□ 0.96
ATG4B-214ENST00000465399 ATRNO75882 1429 aa21.06■□□□□ 0.96
ATG4B-214ENST00000465399 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.06■□□□□ 0.96
ATG4B-214ENST00000465399 ATAD2Q6PL18 1390 aa21.05■□□□□ 0.96
ATG4B-214ENST00000465399 NRXN1Q9ULB1 1477 aa21.05■□□□□ 0.96
ATG4B-214ENST00000465399 DHX57Q6P158 1386 aaKnown RBP21.03■□□□□ 0.96
ATG4B-214ENST00000465399 SIRT1Q96EB6 747 aa21.02■□□□□ 0.96
ATG4B-214ENST00000465399 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
ATG4B-214ENST00000465399 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
ATG4B-214ENST00000465399 USP32Q8NFA0 1604 aa21■□□□□ 0.95
ATG4B-214ENST00000465399 SPATA31A3Q5VYP0 1347 aa21■□□□□ 0.95
ATG4B-214ENST00000465399 CFAP70Q5T0N1 1121 aa20.99■□□□□ 0.95
ATG4B-214ENST00000465399 RAB3GAP2Q9H2M9 1393 aa20.98■□□□□ 0.95
ATG4B-214ENST00000465399 DLC1Q96QB1 1528 aa20.98■□□□□ 0.95
ATG4B-214ENST00000465399 KRT28Q7Z3Y7 464 aa20.97■□□□□ 0.95
ATG4B-214ENST00000465399 TNS3Q68CZ2 1445 aa20.96■□□□□ 0.95
ATG4B-214ENST00000465399 ABCA3Q99758 1704 aa20.96■□□□□ 0.95
ATG4B-214ENST00000465399 PHF8Q9UPP1 1060 aa20.96■□□□□ 0.95
ATG4B-214ENST00000465399 ADGRB2O60241 1585 aa20.95■□□□□ 0.94
ATG4B-214ENST00000465399 PSME1Q06323 249 aa20.95■□□□□ 0.94
ATG4B-214ENST00000465399 PRAM1Q96QH2 718 aa20.95■□□□□ 0.94
ATG4B-214ENST00000465399 SLIT2O94813 1529 aa20.94■□□□□ 0.94
ATG4B-214ENST00000465399 PLCH1Q4KWH8 1693 aa20.94■□□□□ 0.94
ATG4B-214ENST00000465399 HAP1P54257 671 aaPredicted RBP20.94■□□□□ 0.94
ATG4B-214ENST00000465399 SAFB2Q14151 953 aaKnown RBP eCLIP20.94■□□□□ 0.94
ATG4B-214ENST00000465399 GJD4Q96KN9 370 aaPredicted RBP20.94■□□□□ 0.94
ATG4B-214ENST00000465399 NWD2Q9ULI1 1742 aa20.94■□□□□ 0.94
ATG4B-214ENST00000465399 POGKQ9P215 609 aa20.93■□□□□ 0.94
ATG4B-214ENST00000465399 UNC5CLQ8IV45 518 aa20.92■□□□□ 0.94
ATG4B-214ENST00000465399 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
ATG4B-214ENST00000465399 ADGRB1O14514 1584 aa20.92■□□□□ 0.94
ATG4B-214ENST00000465399 GLI3P10071 1580 aa20.92■□□□□ 0.94
ATG4B-214ENST00000465399 EP400Q96L91 3159 aa20.92■□□□□ 0.94
ATG4B-214ENST00000465399 RALGAPBQ86X10 1494 aa20.91■□□□□ 0.94
ATG4B-214ENST00000465399 BRWD3Q6RI45 1802 aa20.9■□□□□ 0.94
ATG4B-214ENST00000465399 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
ATG4B-214ENST00000465399 ARHGEF10O15013 1369 aa20.89■□□□□ 0.93
ATG4B-214ENST00000465399 LMOD2Q6P5Q4 547 aa20.88■□□□□ 0.93
ATG4B-214ENST00000465399 CCDC125Q86Z20 511 aa20.88■□□□□ 0.93
ATG4B-214ENST00000465399 TRPM3Q9HCF6 1732 aaPredicted RBP20.87■□□□□ 0.93
ATG4B-214ENST00000465399 EIF3AQ14152 1382 aaKnown RBP20.86■□□□□ 0.93
ATG4B-214ENST00000465399 PLEKHG5O94827 1062 aa20.86■□□□□ 0.93
ATG4B-214ENST00000465399 CABLES1Q8TDN4 633 aa20.86■□□□□ 0.93
ATG4B-214ENST00000465399 TRAK1Q9UPV9 953 aa20.86■□□□□ 0.93
ATG4B-214ENST00000465399 TULP4Q9NRJ4 1543 aa20.85■□□□□ 0.93
ATG4B-214ENST00000465399 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
ATG4B-214ENST00000465399 ALS2Q96Q42 1657 aa20.85■□□□□ 0.93
ATG4B-214ENST00000465399 ITSN1Q15811 1721 aa20.84■□□□□ 0.93
ATG4B-214ENST00000465399 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
ATG4B-214ENST00000465399 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
ATG4B-214ENST00000465399 KDM2AQ9Y2K7 1162 aa20.84■□□□□ 0.93
ATG4B-214ENST00000465399 HIRIP3Q9BW71 556 aaPredicted RBP20.83■□□□□ 0.93
ATG4B-214ENST00000465399 NRAPQ86VF7 1730 aa20.82■□□□□ 0.92
ATG4B-214ENST00000465399 VPS72Q15906 364 aa20.82■□□□□ 0.92
ATG4B-214ENST00000465399 STAC3Q96MF2 364 aa20.82■□□□□ 0.92
ATG4B-214ENST00000465399 ZRANB1Q9UGI0 708 aa20.82■□□□□ 0.92
ATG4B-214ENST00000465399 GPRASP1Q5JY77 1395 aa20.82■□□□□ 0.92
ATG4B-214ENST00000465399 MINK1Q8N4C8 1332 aaPredicted RBP20.81■□□□□ 0.92
ATG4B-214ENST00000465399 CCDC9Q9Y3X0 531 aaKnown RBP20.81■□□□□ 0.92
ATG4B-214ENST00000465399 BLMP54132 1417 aaPredicted RBP20.8■□□□□ 0.92
ATG4B-214ENST00000465399 COL14A1Q05707 1796 aaKnown RBP20.8■□□□□ 0.92
ATG4B-214ENST00000465399 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
ATG4B-214ENST00000465399 WASLO00401 505 aaPredicted RBP20.78■□□□□ 0.92
ATG4B-214ENST00000465399 SEPT12Q8IYM1 358 aa20.78■□□□□ 0.92
ATG4B-214ENST00000465399 HRCP23327 699 aa20.77■□□□□ 0.92
ATG4B-214ENST00000465399 PRR36Q9H6K5 1346 aa20.77■□□□□ 0.91
ATG4B-214ENST00000465399 FAM83GA6ND36 823 aa20.75■□□□□ 0.91
ATG4B-214ENST00000465399 NGDNQ8NEJ9 315 aaKnown RBP20.75■□□□□ 0.91
ATG4B-214ENST00000465399 KIAA1210Q9ULL0 1709 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms