RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 WAPLQ7Z5K2 1190 aa18.65■□□□□ 0.58
ERGIC3-212ENST00000465298 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
ERGIC3-212ENST00000465298 RBM33Q96EV2 1170 aaKnown RBP18.64■□□□□ 0.57
ERGIC3-212ENST00000465298 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
ERGIC3-212ENST00000465298 CENPJQ9HC77 1338 aaPredicted RBP18.63■□□□□ 0.57
ERGIC3-212ENST00000465298 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
ERGIC3-212ENST00000465298 CDC42BPGQ6DT37 1551 aa18.59■□□□□ 0.57
ERGIC3-212ENST00000465298 PIP4K2BP78356 416 aa18.58■□□□□ 0.56
ERGIC3-212ENST00000465298 SAFB2Q14151 953 aaKnown RBP eCLIP18.58■□□□□ 0.56
ERGIC3-212ENST00000465298 PLEKHH1Q9ULM0 1364 aa18.57■□□□□ 0.56
ERGIC3-212ENST00000465298 XIRP1Q702N8 1843 aaKnown RBP18.57■□□□□ 0.56
ERGIC3-212ENST00000465298 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.57■□□□□ 0.56
ERGIC3-212ENST00000465298 SBNO2Q9Y2G9 1366 aa18.56■□□□□ 0.56
ERGIC3-212ENST00000465298 WASLO00401 505 aaPredicted RBP18.56■□□□□ 0.56
ERGIC3-212ENST00000465298 ZEB1P37275 1124 aaPredicted RBP18.55■□□□□ 0.56
ERGIC3-212ENST00000465298 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
ERGIC3-212ENST00000465298 MINK1Q8N4C8 1332 aaPredicted RBP18.54■□□□□ 0.56
ERGIC3-212ENST00000465298 MST1RQ04912 1400 aa18.54■□□□□ 0.56
ERGIC3-212ENST00000465298 ANKARQ7Z5J8 1434 aa18.54■□□□□ 0.56
ERGIC3-212ENST00000465298 ADGRB2O60241 1585 aa18.54■□□□□ 0.56
ERGIC3-212ENST00000465298 NALCNQ8IZF0 1738 aa18.53■□□□□ 0.56
ERGIC3-212ENST00000465298 ARHGEF28Q8N1W1 1705 aaKnown RBP18.53■□□□□ 0.56
ERGIC3-212ENST00000465298 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
ERGIC3-212ENST00000465298 CDCA8Q53HL2 280 aa18.52■□□□□ 0.56
ERGIC3-212ENST00000465298 ESCO1Q5FWF5 840 aa18.51■□□□□ 0.55
ERGIC3-212ENST00000465298 PUS7Q96PZ0 661 aaKnown RBP18.51■□□□□ 0.55
ERGIC3-212ENST00000465298 USP47Q96K76 1375 aa18.51■□□□□ 0.55
ERGIC3-212ENST00000465298 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
ERGIC3-212ENST00000465298 HIRIP3Q9BW71 556 aaPredicted RBP18.5■□□□□ 0.55
ERGIC3-212ENST00000465298 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
ERGIC3-212ENST00000465298 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
ERGIC3-212ENST00000465298 CDK19Q9BWU1 502 aa18.49■□□□□ 0.55
ERGIC3-212ENST00000465298 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
ERGIC3-212ENST00000465298 CCDC61Q9Y6R9 512 aa18.48■□□□□ 0.55
ERGIC3-212ENST00000465298 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
ERGIC3-212ENST00000465298 ILDR1Q86SU0 546 aaPredicted RBP18.47■□□□□ 0.55
ERGIC3-212ENST00000465298 TULP4Q9NRJ4 1543 aa18.47■□□□□ 0.55
ERGIC3-212ENST00000465298 TMF1P82094 1093 aa18.46■□□□□ 0.55
ERGIC3-212ENST00000465298 ATAD2Q6PL18 1390 aa18.45■□□□□ 0.54
ERGIC3-212ENST00000465298 PSME1Q06323 249 aa18.45■□□□□ 0.54
ERGIC3-212ENST00000465298 NUDT16Q96DE0 195 aaKnown RBP18.45■□□□□ 0.54
ERGIC3-212ENST00000465298 PHF8Q9UPP1 1060 aa18.45■□□□□ 0.54
ERGIC3-212ENST00000465298 FMN2Q9NZ56 1722 aa18.44■□□□□ 0.54
ERGIC3-212ENST00000465298 LRRC59Q96AG4 307 aaKnown RBP18.44■□□□□ 0.54
ERGIC3-212ENST00000465298 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
ERGIC3-212ENST00000465298 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
ERGIC3-212ENST00000465298 ORAI2Q96SN7 254 aa18.43■□□□□ 0.54
ERGIC3-212ENST00000465298 QRICH2Q9H0J4 1663 aa18.43■□□□□ 0.54
ERGIC3-212ENST00000465298 HSPA1LP34931 641 aa18.41■□□□□ 0.54
ERGIC3-212ENST00000465298 NGDNQ8NEJ9 315 aaKnown RBP18.41■□□□□ 0.54
ERGIC3-212ENST00000465298 NINLQ9Y2I6 1382 aa18.41■□□□□ 0.54
ERGIC3-212ENST00000465298 PLEKHG3A1L390 1219 aa18.4■□□□□ 0.54
ERGIC3-212ENST00000465298 TESK2Q96S53 571 aa18.4■□□□□ 0.54
ERGIC3-212ENST00000465298 AHDC1Q5TGY3 1603 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-212ENST00000465298 KIF1AQ12756 1690 aa18.4■□□□□ 0.54
ERGIC3-212ENST00000465298 BRD4O60885 1362 aaPredicted RBP18.4■□□□□ 0.54
ERGIC3-212ENST00000465298 FOXO3O43524 673 aa18.39■□□□□ 0.53
ERGIC3-212ENST00000465298 ZNF692Q9BU19 519 aaPredicted RBP18.39■□□□□ 0.53
ERGIC3-212ENST00000465298 CABP2Q9NPB3 220 aa18.39■□□□□ 0.53
ERGIC3-212ENST00000465298 SOS2Q07890 1332 aaPredicted RBP18.38■□□□□ 0.53
ERGIC3-212ENST00000465298 ATP7BP35670 1465 aa18.38■□□□□ 0.53
ERGIC3-212ENST00000465298 PRR36Q9H6K5 1346 aa18.37■□□□□ 0.53
ERGIC3-212ENST00000465298 JCADQ9P266 1359 aa18.37■□□□□ 0.53
ERGIC3-212ENST00000465298 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
ERGIC3-212ENST00000465298 HSPA5P11021 654 aaKnown RBP18.35■□□□□ 0.53
ERGIC3-212ENST00000465298 KRT28Q7Z3Y7 464 aa18.35■□□□□ 0.53
ERGIC3-212ENST00000465298 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
ERGIC3-212ENST00000465298 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
ERGIC3-212ENST00000465298 PPIP5K1Q6PFW1 1433 aa18.34■□□□□ 0.53
ERGIC3-212ENST00000465298 SBNO1A3KN83 1393 aa18.33■□□□□ 0.53
ERGIC3-212ENST00000465298 POLR3AO14802 1390 aaPredicted RBP18.33■□□□□ 0.53
ERGIC3-212ENST00000465298 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
ERGIC3-212ENST00000465298 HDGFL2Q7Z4V5 671 aaPredicted RBP18.33■□□□□ 0.52
ERGIC3-212ENST00000465298 CABP1Q9NZU7 370 aa18.33■□□□□ 0.52
ERGIC3-212ENST00000465298 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.52
ERGIC3-212ENST00000465298 PHLPP1O60346 1717 aa18.32■□□□□ 0.52
ERGIC3-212ENST00000465298 ACEP12821 1306 aa18.32■□□□□ 0.52
ERGIC3-212ENST00000465298 ARHGEF10O15013 1369 aa18.31■□□□□ 0.52
ERGIC3-212ENST00000465298 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
ERGIC3-212ENST00000465298 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
ERGIC3-212ENST00000465298 SPATA31A3Q5VYP0 1347 aa18.28■□□□□ 0.52
ERGIC3-212ENST00000465298 PXDNQ92626 1479 aa18.28■□□□□ 0.52
ERGIC3-212ENST00000465298 COL16A1Q07092 1604 aaPredicted RBP18.28■□□□□ 0.52
ERGIC3-212ENST00000465298 TNS3Q68CZ2 1445 aa18.26■□□□□ 0.51
ERGIC3-212ENST00000465298 TOPAZ1Q8N9V7 1692 aa18.26■□□□□ 0.51
ERGIC3-212ENST00000465298 PAK3O75914 559 aaPredicted RBP18.26■□□□□ 0.51
ERGIC3-212ENST00000465298 DDX17Q92841 729 aaKnown RBP18.26■□□□□ 0.51
ERGIC3-212ENST00000465298 DISP3Q9P2K9 1392 aa18.26■□□□□ 0.51
ERGIC3-212ENST00000465298 TTC21AQ8NDW8 1320 aa18.24■□□□□ 0.51
ERGIC3-212ENST00000465298 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
ERGIC3-212ENST00000465298 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
ERGIC3-212ENST00000465298 KTN1Q86UP2 1357 aaKnown RBP18.24■□□□□ 0.51
ERGIC3-212ENST00000465298 RGPD8O14715 1765 aaPredicted RBP18.24■□□□□ 0.51
ERGIC3-212ENST00000465298 USP6P35125 1406 aa18.23■□□□□ 0.51
ERGIC3-212ENST00000465298 PNPLA6Q8IY17 1366 aa18.23■□□□□ 0.51
ERGIC3-212ENST00000465298 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
ERGIC3-212ENST00000465298 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
ERGIC3-212ENST00000465298 SLC12A5Q9H2X9 1139 aa18.23■□□□□ 0.51
ERGIC3-212ENST00000465298 CPSF1Q10570 1443 aaKnown RBP18.23■□□□□ 0.51
ERGIC3-212ENST00000465298 ANKRD36BQ8N2N9 1353 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms