RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 GLI3P10071 1580 aa23.22■■□□□ 1.31
HDAC6-214ENST00000465269 BRWD3Q6RI45 1802 aa23.2■■□□□ 1.3
HDAC6-214ENST00000465269 RALGAPBQ86X10 1494 aa23.2■■□□□ 1.3
HDAC6-214ENST00000465269 MARF1Q9Y4F3 1742 aaKnown RBP23.19■■□□□ 1.3
HDAC6-214ENST00000465269 LRP5O75197 1615 aa23.19■■□□□ 1.3
HDAC6-214ENST00000465269 NEXMIFQ5QGS0 1516 aa23.19■■□□□ 1.3
HDAC6-214ENST00000465269 ESCO1Q5FWF5 840 aa23.17■■□□□ 1.3
HDAC6-214ENST00000465269 PXDNQ92626 1479 aa23.17■■□□□ 1.3
HDAC6-214ENST00000465269 SPHKAPQ2M3C7 1700 aa23.16■■□□□ 1.3
HDAC6-214ENST00000465269 FOXO3O43524 673 aa23.15■■□□□ 1.3
HDAC6-214ENST00000465269 UNC5CLQ8IV45 518 aa23.14■■□□□ 1.29
HDAC6-214ENST00000465269 CLTCL1P53675 1640 aa23.13■■□□□ 1.29
HDAC6-214ENST00000465269 NUTM2FA1L443 756 aa23.13■■□□□ 1.29
HDAC6-214ENST00000465269 SF3B2Q13435 895 aaKnown RBP23.13■■□□□ 1.29
HDAC6-214ENST00000465269 SEPT12Q8IYM1 358 aa23.13■■□□□ 1.29
HDAC6-214ENST00000465269 NPHP3Q7Z494 1330 aa23.12■■□□□ 1.29
HDAC6-214ENST00000465269 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
HDAC6-214ENST00000465269 HRCP23327 699 aa23.11■■□□□ 1.29
HDAC6-214ENST00000465269 SLIT2O94813 1529 aa23.11■■□□□ 1.29
HDAC6-214ENST00000465269 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
HDAC6-214ENST00000465269 ITGAEP38570 1179 aa23.1■■□□□ 1.29
HDAC6-214ENST00000465269 ROCK1Q13464 1354 aa23.07■■□□□ 1.28
HDAC6-214ENST00000465269 HFM1A2PYH4 1435 aa23.03■■□□□ 1.28
HDAC6-214ENST00000465269 CABLES1Q8TDN4 633 aa23.03■■□□□ 1.28
HDAC6-214ENST00000465269 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
HDAC6-214ENST00000465269 CDC42BPGQ6DT37 1551 aa23.02■■□□□ 1.28
HDAC6-214ENST00000465269 KRT27Q7Z3Y8 459 aa23.02■■□□□ 1.28
HDAC6-214ENST00000465269 USP32Q8NFA0 1604 aa23.01■■□□□ 1.27
HDAC6-214ENST00000465269 NAIPQ13075 1403 aa23■■□□□ 1.27
HDAC6-214ENST00000465269 R3HDM1Q15032 1099 aaKnown RBP23■■□□□ 1.27
HDAC6-214ENST00000465269 SPATA31A3Q5VYP0 1347 aa23■■□□□ 1.27
HDAC6-214ENST00000465269 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
HDAC6-214ENST00000465269 EN1Q05925 392 aaPredicted RBP22.99■■□□□ 1.27
HDAC6-214ENST00000465269 VPS72Q15906 364 aa22.99■■□□□ 1.27
HDAC6-214ENST00000465269 FAM182BQ5T319 152 aa22.99■■□□□ 1.27
HDAC6-214ENST00000465269 WAPLQ7Z5K2 1190 aa22.99■■□□□ 1.27
HDAC6-214ENST00000465269 KIF1BO60333 1816 aa22.98■■□□□ 1.27
HDAC6-214ENST00000465269 A0A0G2JS52 829 aa22.98■■□□□ 1.27
HDAC6-214ENST00000465269 BAG6P46379 1132 aa22.98■■□□□ 1.27
HDAC6-214ENST00000465269 MYT1Q01538 1121 aa22.98■■□□□ 1.27
HDAC6-214ENST00000465269 VGFO15240 615 aaPredicted RBP22.97■■□□□ 1.27
HDAC6-214ENST00000465269 STK26Q9P289 416 aa22.97■■□□□ 1.27
HDAC6-214ENST00000465269 PLCH1Q4KWH8 1693 aa22.96■■□□□ 1.27
HDAC6-214ENST00000465269 ONECUT3O60422 494 aaPredicted RBP22.95■■□□□ 1.26
HDAC6-214ENST00000465269 LRPPRCP42704 1394 aaKnown RBP22.95■■□□□ 1.26
HDAC6-214ENST00000465269 HAP1P54257 671 aaPredicted RBP22.95■■□□□ 1.26
HDAC6-214ENST00000465269 PLEKHH1Q9ULM0 1364 aa22.94■■□□□ 1.26
HDAC6-214ENST00000465269 KRT28Q7Z3Y7 464 aa22.94■■□□□ 1.26
HDAC6-214ENST00000465269 FAM98CQ17RN3 349 aaKnown RBP22.93■■□□□ 1.26
HDAC6-214ENST00000465269 YY1P25490 414 aa22.89■■□□□ 1.25
HDAC6-214ENST00000465269 LMOD2Q6P5Q4 547 aa22.89■■□□□ 1.25
HDAC6-214ENST00000465269 CCDC144AA2RUR9 1427 aa22.89■■□□□ 1.25
HDAC6-214ENST00000465269 FAM83GA6ND36 823 aa22.88■■□□□ 1.25
HDAC6-214ENST00000465269 PPLO60437 1756 aa22.87■■□□□ 1.25
HDAC6-214ENST00000465269 TNS3Q68CZ2 1445 aa22.87■■□□□ 1.25
HDAC6-214ENST00000465269 NWD2Q9ULI1 1742 aa22.87■■□□□ 1.25
HDAC6-214ENST00000465269 ABCA3Q99758 1704 aa22.86■■□□□ 1.25
HDAC6-214ENST00000465269 FMN2Q9NZ56 1722 aa22.86■■□□□ 1.25
HDAC6-214ENST00000465269 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
HDAC6-214ENST00000465269 ADGRF5Q8IZF2 1346 aa22.85■■□□□ 1.25
HDAC6-214ENST00000465269 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
HDAC6-214ENST00000465269 KIF1AQ12756 1690 aa22.84■■□□□ 1.25
HDAC6-214ENST00000465269 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
HDAC6-214ENST00000465269 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.25
HDAC6-214ENST00000465269 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
HDAC6-214ENST00000465269 NRAPQ86VF7 1730 aa22.82■■□□□ 1.24
HDAC6-214ENST00000465269 RPGRIP1LQ68CZ1 1315 aa22.82■■□□□ 1.24
HDAC6-214ENST00000465269 BTG4Q9NY30 223 aa22.81■■□□□ 1.24
HDAC6-214ENST00000465269 PHF8Q9UPP1 1060 aa22.81■■□□□ 1.24
HDAC6-214ENST00000465269 TNS1Q9HBL0 1735 aaKnown RBP22.81■■□□□ 1.24
HDAC6-214ENST00000465269 TECPR2O15040 1411 aa22.8■■□□□ 1.24
HDAC6-214ENST00000465269 PSME1Q06323 249 aa22.77■■□□□ 1.24
HDAC6-214ENST00000465269 CAMKK2Q96RR4 588 aa22.76■■□□□ 1.23
HDAC6-214ENST00000465269 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
HDAC6-214ENST00000465269 TRIM37O94972 964 aa22.75■■□□□ 1.23
HDAC6-214ENST00000465269 RGL3Q3MIN7 710 aa22.75■■□□□ 1.23
HDAC6-214ENST00000465269 ABCC11Q96J66 1382 aa22.75■■□□□ 1.23
HDAC6-214ENST00000465269 IFT172Q9UG01 1749 aa22.74■■□□□ 1.23
HDAC6-214ENST00000465269 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
HDAC6-214ENST00000465269 SBNO1A3KN83 1393 aa22.74■■□□□ 1.23
HDAC6-214ENST00000465269 RRBP1Q9P2E9 1410 aaKnown RBP22.74■■□□□ 1.23
HDAC6-214ENST00000465269 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
HDAC6-214ENST00000465269 KNDC1Q76NI1 1749 aa22.72■■□□□ 1.23
HDAC6-214ENST00000465269 SAFB2Q14151 953 aaKnown RBP eCLIP22.72■■□□□ 1.23
HDAC6-214ENST00000465269 SPATA31A5Q5VU36 1347 aa22.72■■□□□ 1.23
HDAC6-214ENST00000465269 SPATA31A7Q8IWB4 1347 aa22.72■■□□□ 1.23
HDAC6-214ENST00000465269 ARHGEF10O15013 1369 aa22.72■■□□□ 1.23
HDAC6-214ENST00000465269 THSD7AQ9UPZ6 1657 aa22.71■■□□□ 1.23
HDAC6-214ENST00000465269 YTHDC2Q9H6S0 1430 aaKnown RBP22.7■■□□□ 1.22
HDAC6-214ENST00000465269 APBA3O96018 575 aa22.69■■□□□ 1.22
HDAC6-214ENST00000465269 UTRNP46939 3433 aa22.69■■□□□ 1.22
HDAC6-214ENST00000465269 SLC4A1APQ9BWU0 796 aaKnown RBP22.68■■□□□ 1.22
HDAC6-214ENST00000465269 COL14A1Q05707 1796 aaKnown RBP22.67■■□□□ 1.22
HDAC6-214ENST00000465269 CAMTA1Q9Y6Y1 1673 aa22.65■■□□□ 1.22
HDAC6-214ENST00000465269 ADGRB2O60241 1585 aa22.64■■□□□ 1.22
HDAC6-214ENST00000465269 PPP1R1BQ9UD71 204 aaPredicted RBP22.64■■□□□ 1.21
HDAC6-214ENST00000465269 TRPM3Q9HCF6 1732 aaPredicted RBP22.64■■□□□ 1.21
HDAC6-214ENST00000465269 NUP188Q5SRE5 1749 aa22.63■■□□□ 1.21
HDAC6-214ENST00000465269 PIK3C2GO75747 1445 aa22.63■■□□□ 1.21
HDAC6-214ENST00000465269 RREB1Q92766 1687 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms