RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 CDC42BPGQ6DT37 1551 aa18.33■□□□□ 0.52
TRA2B-208ENST00000465245 MYOM2P54296 1465 aa18.33■□□□□ 0.52
TRA2B-208ENST00000465245 VGFO15240 615 aaPredicted RBP18.32■□□□□ 0.52
TRA2B-208ENST00000465245 HFM1A2PYH4 1435 aa18.32■□□□□ 0.52
TRA2B-208ENST00000465245 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
TRA2B-208ENST00000465245 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.3■□□□□ 0.52
TRA2B-208ENST00000465245 NPHP3Q7Z494 1330 aa18.29■□□□□ 0.52
TRA2B-208ENST00000465245 PXDNQ92626 1479 aa18.29■□□□□ 0.52
TRA2B-208ENST00000465245 BCL9LQ86UU0 1499 aa18.28■□□□□ 0.52
TRA2B-208ENST00000465245 ESCO1Q5FWF5 840 aa18.27■□□□□ 0.52
TRA2B-208ENST00000465245 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
TRA2B-208ENST00000465245 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
TRA2B-208ENST00000465245 NAIPQ13075 1403 aa18.25■□□□□ 0.51
TRA2B-208ENST00000465245 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
TRA2B-208ENST00000465245 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
TRA2B-208ENST00000465245 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
TRA2B-208ENST00000465245 BRWD3Q6RI45 1802 aa18.23■□□□□ 0.51
TRA2B-208ENST00000465245 GLI3P10071 1580 aa18.22■□□□□ 0.51
TRA2B-208ENST00000465245 FOXO3O43524 673 aa18.22■□□□□ 0.51
TRA2B-208ENST00000465245 KNDC1Q76NI1 1749 aa18.21■□□□□ 0.51
TRA2B-208ENST00000465245 LRPPRCP42704 1394 aaKnown RBP18.21■□□□□ 0.51
TRA2B-208ENST00000465245 KIF1AQ12756 1690 aa18.21■□□□□ 0.51
TRA2B-208ENST00000465245 FMN2Q9NZ56 1722 aa18.2■□□□□ 0.5
TRA2B-208ENST00000465245 USP32Q8NFA0 1604 aa18.2■□□□□ 0.5
TRA2B-208ENST00000465245 RALGAPBQ86X10 1494 aa18.2■□□□□ 0.5
TRA2B-208ENST00000465245 NUTM2FA1L443 756 aa18.19■□□□□ 0.5
TRA2B-208ENST00000465245 IFT172Q9UG01 1749 aa18.19■□□□□ 0.5
TRA2B-208ENST00000465245 SLIT2O94813 1529 aa18.18■□□□□ 0.5
TRA2B-208ENST00000465245 TECPR2O15040 1411 aa18.18■□□□□ 0.5
TRA2B-208ENST00000465245 BLMP54132 1417 aaPredicted RBP18.18■□□□□ 0.5
TRA2B-208ENST00000465245 RRBP1Q9P2E9 1410 aaKnown RBP18.18■□□□□ 0.5
TRA2B-208ENST00000465245 UNC5CLQ8IV45 518 aa18.17■□□□□ 0.5
TRA2B-208ENST00000465245 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
TRA2B-208ENST00000465245 PLCH1Q4KWH8 1693 aa18.17■□□□□ 0.5
TRA2B-208ENST00000465245 WAPLQ7Z5K2 1190 aa18.16■□□□□ 0.5
TRA2B-208ENST00000465245 STK26Q9P289 416 aa18.16■□□□□ 0.5
TRA2B-208ENST00000465245 RGPD8O14715 1765 aaPredicted RBP18.16■□□□□ 0.5
TRA2B-208ENST00000465245 ADGRF5Q8IZF2 1346 aa18.15■□□□□ 0.5
TRA2B-208ENST00000465245 NWD2Q9ULI1 1742 aa18.15■□□□□ 0.5
TRA2B-208ENST00000465245 CCDC144AA2RUR9 1427 aa18.15■□□□□ 0.5
TRA2B-208ENST00000465245 SPATA31A3Q5VYP0 1347 aa18.14■□□□□ 0.49
TRA2B-208ENST00000465245 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
TRA2B-208ENST00000465245 PLEKHH1Q9ULM0 1364 aa18.12■□□□□ 0.49
TRA2B-208ENST00000465245 LRP5O75197 1615 aa18.12■□□□□ 0.49
TRA2B-208ENST00000465245 SF3B2Q13435 895 aaKnown RBP18.11■□□□□ 0.49
TRA2B-208ENST00000465245 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
TRA2B-208ENST00000465245 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
TRA2B-208ENST00000465245 TNS3Q68CZ2 1445 aa18.11■□□□□ 0.49
TRA2B-208ENST00000465245 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
TRA2B-208ENST00000465245 KRT28Q7Z3Y7 464 aa18.1■□□□□ 0.49
TRA2B-208ENST00000465245 ANKRD30BQ9BXX2 1392 aa18.09■□□□□ 0.49
TRA2B-208ENST00000465245 RGL3Q3MIN7 710 aa18.09■□□□□ 0.49
TRA2B-208ENST00000465245 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
TRA2B-208ENST00000465245 SEPT12Q8IYM1 358 aa18.09■□□□□ 0.49
TRA2B-208ENST00000465245 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
TRA2B-208ENST00000465245 SPATA31E1Q6ZUB1 1445 aa18.08■□□□□ 0.49
TRA2B-208ENST00000465245 YTHDC2Q9H6S0 1430 aaKnown RBP18.08■□□□□ 0.49
TRA2B-208ENST00000465245 VPS72Q15906 364 aa18.07■□□□□ 0.48
TRA2B-208ENST00000465245 CCDC9Q9Y3X0 531 aaKnown RBP18.07■□□□□ 0.48
TRA2B-208ENST00000465245 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
TRA2B-208ENST00000465245 CABLES1Q8TDN4 633 aa18.05■□□□□ 0.48
TRA2B-208ENST00000465245 NRAPQ86VF7 1730 aa18.04■□□□□ 0.48
TRA2B-208ENST00000465245 NRXN1Q9ULB1 1477 aa18.04■□□□□ 0.48
TRA2B-208ENST00000465245 PSME1Q06323 249 aa18.04■□□□□ 0.48
TRA2B-208ENST00000465245 PHF8Q9UPP1 1060 aa18.04■□□□□ 0.48
TRA2B-208ENST00000465245 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
TRA2B-208ENST00000465245 SBNO1A3KN83 1393 aa18.03■□□□□ 0.48
TRA2B-208ENST00000465245 A0A0G2JS52 829 aa18.02■□□□□ 0.48
TRA2B-208ENST00000465245 MYT1Q01538 1121 aa18.02■□□□□ 0.48
TRA2B-208ENST00000465245 LMOD2Q6P5Q4 547 aa18.02■□□□□ 0.48
TRA2B-208ENST00000465245 ARHGEF10O15013 1369 aa18.02■□□□□ 0.47
TRA2B-208ENST00000465245 RGPD1P0DJD0 1748 aa18.01■□□□□ 0.47
TRA2B-208ENST00000465245 ONECUT3O60422 494 aaPredicted RBP18.01■□□□□ 0.47
TRA2B-208ENST00000465245 TRPM3Q9HCF6 1732 aaPredicted RBP17.99■□□□□ 0.47
TRA2B-208ENST00000465245 BAG6P46379 1132 aa17.99■□□□□ 0.47
TRA2B-208ENST00000465245 SIRT1Q96EB6 747 aa17.99■□□□□ 0.47
TRA2B-208ENST00000465245 COL14A1Q05707 1796 aaKnown RBP17.99■□□□□ 0.47
TRA2B-208ENST00000465245 PSDA5PKW4 1024 aaPredicted RBP17.98■□□□□ 0.47
TRA2B-208ENST00000465245 ALS2Q96Q42 1657 aa17.97■□□□□ 0.47
TRA2B-208ENST00000465245 DHX57Q6P158 1386 aaKnown RBP17.97■□□□□ 0.47
TRA2B-208ENST00000465245 SAFB2Q14151 953 aaKnown RBP eCLIP17.97■□□□□ 0.47
TRA2B-208ENST00000465245 ADGRB2O60241 1585 aa17.96■□□□□ 0.47
TRA2B-208ENST00000465245 FAM83GA6ND36 823 aa17.96■□□□□ 0.47
TRA2B-208ENST00000465245 FAM98CQ17RN3 349 aaKnown RBP17.96■□□□□ 0.47
TRA2B-208ENST00000465245 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
TRA2B-208ENST00000465245 C14orf93Q9H972 538 aaKnown RBP17.96■□□□□ 0.47
TRA2B-208ENST00000465245 ANKARQ7Z5J8 1434 aa17.96■□□□□ 0.47
TRA2B-208ENST00000465245 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
TRA2B-208ENST00000465245 HRCP23327 699 aa17.95■□□□□ 0.46
TRA2B-208ENST00000465245 PMFBP1Q8TBY8 1022 aa17.95■□□□□ 0.46
TRA2B-208ENST00000465245 PRAM1Q96QH2 718 aa17.95■□□□□ 0.46
TRA2B-208ENST00000465245 DLC1Q96QB1 1528 aa17.94■□□□□ 0.46
TRA2B-208ENST00000465245 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
TRA2B-208ENST00000465245 CFAP70Q5T0N1 1121 aa17.93■□□□□ 0.46
TRA2B-208ENST00000465245 BTG4Q9NY30 223 aa17.93■□□□□ 0.46
TRA2B-208ENST00000465245 THSD7AQ9UPZ6 1657 aa17.93■□□□□ 0.46
TRA2B-208ENST00000465245 EN1Q05925 392 aaPredicted RBP17.91■□□□□ 0.46
TRA2B-208ENST00000465245 POGKQ9P215 609 aa17.91■□□□□ 0.46
TRA2B-208ENST00000465245 GPRASP1Q5JY77 1395 aa17.9■□□□□ 0.46
TRA2B-208ENST00000465245 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms