RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
SSBP1-204ENST00000465167 CDHR5Q9HBB8 845 aa9.25□□□□□ -0.93
SSBP1-204ENST00000465167 NPDC1Q9NQX5 325 aaPredicted RBP9.25□□□□□ -0.93
SSBP1-204ENST00000465167 REREQ9P2R6 1566 aa9.24□□□□□ -0.93
SSBP1-204ENST00000465167 ABCA6Q8N139 1617 aa9.24□□□□□ -0.93
SSBP1-204ENST00000465167 MAP3K7O43318 606 aa9.24□□□□□ -0.93
SSBP1-204ENST00000465167 MAMSTRQ6ZN01 415 aa9.24□□□□□ -0.93
SSBP1-204ENST00000465167 AFAP1Q8N556 730 aa9.24□□□□□ -0.93
SSBP1-204ENST00000465167 RBM33Q96EV2 1170 aaKnown RBP9.24□□□□□ -0.93
SSBP1-204ENST00000465167 SCUBE2Q9NQ36 999 aa9.24□□□□□ -0.93
SSBP1-204ENST00000465167 ZNF777Q9ULD5 760 aaPredicted RBP9.24□□□□□ -0.93
SSBP1-204ENST00000465167 MLH3Q9UHC1 1453 aa9.23□□□□□ -0.93
SSBP1-204ENST00000465167 FOSBP53539 338 aa9.23□□□□□ -0.93
SSBP1-204ENST00000465167 ARSIQ5FYB1 569 aa9.23□□□□□ -0.93
SSBP1-204ENST00000465167 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
SSBP1-204ENST00000465167 MTUS2Q5JR59 1369 aa9.23□□□□□ -0.93
SSBP1-204ENST00000465167 UHRF1BP1Q6BDS2 1440 aa9.22□□□□□ -0.93
SSBP1-204ENST00000465167 PLEKHH2Q8IVE3 1493 aa9.22□□□□□ -0.93
SSBP1-204ENST00000465167 NUDT7P0C024 238 aa9.22□□□□□ -0.93
SSBP1-204ENST00000465167 HSPA2P54652 639 aa9.22□□□□□ -0.93
SSBP1-204ENST00000465167 TSR1Q2NL82 804 aaKnown RBP9.22□□□□□ -0.93
SSBP1-204ENST00000465167 KHSRPQ92945 711 aaKnown RBP eCLIP9.22□□□□□ -0.931e-7■■■□□ 16.4
SSBP1-204ENST00000465167 ZSWIM6Q9HCJ5 1215 aa9.22□□□□□ -0.93
SSBP1-204ENST00000465167 CCNB3Q8WWL7 1395 aa9.22□□□□□ -0.93
SSBP1-204ENST00000465167 SYCP2Q9BX26 1530 aa9.21□□□□□ -0.93
SSBP1-204ENST00000465167 SETD1BQ9UPS6 1966 aaKnown RBP9.21□□□□□ -0.93
SSBP1-204ENST00000465167 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
SSBP1-204ENST00000465167 AMHR2Q16671 573 aa9.21□□□□□ -0.94
SSBP1-204ENST00000465167 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
SSBP1-204ENST00000465167 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
SSBP1-204ENST00000465167 TRAPPC8Q9Y2L5 1435 aa9.21□□□□□ -0.94
SSBP1-204ENST00000465167 AGLP35573 1532 aa9.21□□□□□ -0.94
SSBP1-204ENST00000465167 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
SSBP1-204ENST00000465167 C3P01024 1663 aa9.2□□□□□ -0.94
SSBP1-204ENST00000465167 KIDINS220Q9ULH0 1771 aa9.2□□□□□ -0.94
SSBP1-204ENST00000465167 CFDP1Q9UEE9 299 aaPredicted RBP9.2□□□□□ -0.94
SSBP1-204ENST00000465167 SPAG9O60271 1321 aaKnown RBP9.2□□□□□ -0.94
SSBP1-204ENST00000465167 SUPT6HQ7KZ85 1726 aaKnown RBP9.19□□□□□ -0.94
SSBP1-204ENST00000465167 ZNF454Q8N9F8 522 aa9.19□□□□□ -0.94
SSBP1-204ENST00000465167 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
SSBP1-204ENST00000465167 EHBP1L1Q8N3D4 1523 aa9.19□□□□□ -0.94
SSBP1-204ENST00000465167 MROH2AA6NES4 1674 aa9.18□□□□□ -0.94
SSBP1-204ENST00000465167 CEBPAP49715 358 aaPredicted RBP9.18□□□□□ -0.94
SSBP1-204ENST00000465167 ATP7AQ04656 1500 aa9.18□□□□□ -0.94
SSBP1-204ENST00000465167 IL27Q8NEV9 243 aa9.18□□□□□ -0.94
SSBP1-204ENST00000465167 ZDHHC16Q969W1 377 aa9.18□□□□□ -0.94
SSBP1-204ENST00000465167 ADGBQ8N7X0 1667 aa9.17□□□□□ -0.94
SSBP1-204ENST00000465167 GPATCH8Q9UKJ3 1502 aaKnown RBP9.17□□□□□ -0.94
SSBP1-204ENST00000465167 C6orf132Q5T0Z8 1188 aa9.17□□□□□ -0.94
SSBP1-204ENST00000465167 ZNF710Q8N1W2 664 aa9.17□□□□□ -0.94
SSBP1-204ENST00000465167 KIAA1107Q9UPP5 1409 aa9.16□□□□□ -0.94
SSBP1-204ENST00000465167 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSBP1-204ENST00000465167 PARP9Q8IXQ6 854 aa9.16□□□□□ -0.94
SSBP1-204ENST00000465167 TIMELESSQ9UNS1 1208 aa9.16□□□□□ -0.94
SSBP1-204ENST00000465167 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-204ENST00000465167 CEP162Q5TB80 1403 aa9.15□□□□□ -0.94
SSBP1-204ENST00000465167 CERKQ8TCT0 537 aa9.15□□□□□ -0.94
SSBP1-204ENST00000465167 ADAM33Q9BZ11 813 aa9.15□□□□□ -0.94
SSBP1-204ENST00000465167 TIAM1Q13009 1591 aa9.15□□□□□ -0.95
SSBP1-204ENST00000465167 A2MP01023 1474 aa9.15□□□□□ -0.95
SSBP1-204ENST00000465167 CLTCQ00610 1675 aaKnown RBP9.14□□□□□ -0.95
SSBP1-204ENST00000465167 FAM117AQ9C073 453 aa9.14□□□□□ -0.95
SSBP1-204ENST00000465167 STRCQ7RTU9 1775 aa9.14□□□□□ -0.95
SSBP1-204ENST00000465167 NPATQ14207 1427 aa9.14□□□□□ -0.95
SSBP1-204ENST00000465167 LHX6Q9UPM6 363 aa9.13□□□□□ -0.95
SSBP1-204ENST00000465167 SNPHO15079 494 aa9.12□□□□□ -0.95
SSBP1-204ENST00000465167 ERICH6Q7L0X2 663 aa9.12□□□□□ -0.95
SSBP1-204ENST00000465167 PLXNC1O60486 1568 aa9.12□□□□□ -0.95
SSBP1-204ENST00000465167 TTLL12Q14166 644 aaPredicted RBP9.11□□□□□ -0.95
SSBP1-204ENST00000465167 GGT6Q6P531 493 aa9.11□□□□□ -0.95
SSBP1-204ENST00000465167 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
SSBP1-204ENST00000465167 TTC13Q8NBP0 860 aa9.11□□□□□ -0.95
SSBP1-204ENST00000465167 PTPRTO14522 1441 aa9.11□□□□□ -0.95
SSBP1-204ENST00000465167 ZMYM3Q14202 1370 aa9.11□□□□□ -0.95
SSBP1-204ENST00000465167 CCDC141Q6ZP82 1450 aa9.1□□□□□ -0.95
SSBP1-204ENST00000465167 MYO3AQ8NEV4 1616 aa9.1□□□□□ -0.95
SSBP1-204ENST00000465167 PLEKHG3A1L390 1219 aa9.1□□□□□ -0.95
SSBP1-204ENST00000465167 PSDA5PKW4 1024 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-204ENST00000465167 PHOX2BQ99453 314 aa9.1□□□□□ -0.95
SSBP1-204ENST00000465167 REPIN1Q9BWE0 567 aaKnown RBP9.1□□□□□ -0.95
SSBP1-204ENST00000465167 RBM27Q9P2N5 1060 aaKnown RBP9.1□□□□□ -0.95
SSBP1-204ENST00000465167 ZNF142P52746 1687 aaPredicted RBP9.1□□□□□ -0.95
SSBP1-204ENST00000465167 CAMSAP1Q5T5Y3 1602 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 CAMSAP2Q08AD1 1489 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 RTEL1-TNFRSF6BF6WH68 1400 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 HOXB1P14653 301 aaPredicted RBP9.09□□□□□ -0.95
SSBP1-204ENST00000465167 PPP4R3BQ5MIZ7 849 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 RSPH4AQ5TD94 716 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 DDRGK1Q96HY6 314 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 TMUB1Q9BVT8 246 aa9.09□□□□□ -0.95
SSBP1-204ENST00000465167 NCOA2Q15596 1464 aa9.08□□□□□ -0.96
SSBP1-204ENST00000465167 NCOA1Q15788 1441 aa9.08□□□□□ -0.96
SSBP1-204ENST00000465167 OATP04181 439 aa9.08□□□□□ -0.96
SSBP1-204ENST00000465167 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
SSBP1-204ENST00000465167 GIGYF2Q6Y7W6 1299 aaKnown RBP9.08□□□□□ -0.96
SSBP1-204ENST00000465167 OTUD5Q96G74 571 aa9.08□□□□□ -0.96
SSBP1-204ENST00000465167 ADGRG1Q9Y653 693 aa9.08□□□□□ -0.96
SSBP1-204ENST00000465167 CEP170BQ9Y4F5 1589 aaPredicted RBP9.07□□□□□ -0.96
SSBP1-204ENST00000465167 FAM135AQ9P2D6 1515 aa9.07□□□□□ -0.96
SSBP1-204ENST00000465167 TSPY4P0CV99 314 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms