RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ADGRF5Q8IZF2 1346 aa25.47■■□□□ 1.67
CPSF4-209ENST00000465132 SPATA31E1Q6ZUB1 1445 aa25.46■■□□□ 1.67
CPSF4-209ENST00000465132 RGL3Q3MIN7 710 aa25.44■■□□□ 1.66
CPSF4-209ENST00000465132 QTRT2Q9H974 415 aaKnown RBP25.44■■□□□ 1.66
CPSF4-209ENST00000465132 ADAMTS2O95450 1211 aa25.43■■□□□ 1.66
CPSF4-209ENST00000465132 ANKRD30BQ9BXX2 1392 aa25.43■■□□□ 1.66
CPSF4-209ENST00000465132 NGLY1Q96IV0 654 aa25.42■■□□□ 1.66
CPSF4-209ENST00000465132 CDC42BPGQ6DT37 1551 aa25.42■■□□□ 1.66
CPSF4-209ENST00000465132 RBM6P78332 1123 aaKnown RBP25.41■■□□□ 1.66
CPSF4-209ENST00000465132 TECPR2O15040 1411 aa25.4■■□□□ 1.66
CPSF4-209ENST00000465132 STK26Q9P289 416 aa25.39■■□□□ 1.66
CPSF4-209ENST00000465132 LRPPRCP42704 1394 aaKnown RBP25.39■■□□□ 1.65
CPSF4-209ENST00000465132 ESCO1Q5FWF5 840 aa25.38■■□□□ 1.65
CPSF4-209ENST00000465132 RGS12O14924 1447 aa25.37■■□□□ 1.65
CPSF4-209ENST00000465132 WAPLQ7Z5K2 1190 aa25.37■■□□□ 1.65
CPSF4-209ENST00000465132 NPHP3Q7Z494 1330 aa25.37■■□□□ 1.65
CPSF4-209ENST00000465132 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
CPSF4-209ENST00000465132 IFT172Q9UG01 1749 aa25.36■■□□□ 1.65
CPSF4-209ENST00000465132 TMEM132EQ6IEE7 984 aa25.35■■□□□ 1.65
CPSF4-209ENST00000465132 PIK3C2GO75747 1445 aa25.35■■□□□ 1.65
CPSF4-209ENST00000465132 PXDNQ92626 1479 aa25.34■■□□□ 1.65
CPSF4-209ENST00000465132 COL22A1Q8NFW1 1626 aaPredicted RBP25.34■■□□□ 1.65
CPSF4-209ENST00000465132 USP21Q9UK80 565 aa25.33■■□□□ 1.65
CPSF4-209ENST00000465132 PLEKHH1Q9ULM0 1364 aa25.32■■□□□ 1.64
CPSF4-209ENST00000465132 FOXO3O43524 673 aa25.32■■□□□ 1.64
CPSF4-209ENST00000465132 FNBP4Q8N3X1 1017 aaPredicted RBP25.32■■□□□ 1.64
CPSF4-209ENST00000465132 MYOM2P54296 1465 aa25.32■■□□□ 1.64
CPSF4-209ENST00000465132 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
CPSF4-209ENST00000465132 NUTM2FA1L443 756 aa25.3■■□□□ 1.64
CPSF4-209ENST00000465132 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
CPSF4-209ENST00000465132 TRPC5Q9UL62 973 aaPredicted RBP25.3■■□□□ 1.64
CPSF4-209ENST00000465132 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
CPSF4-209ENST00000465132 KNDC1Q76NI1 1749 aa25.29■■□□□ 1.64
CPSF4-209ENST00000465132 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
CPSF4-209ENST00000465132 SIRT1Q96EB6 747 aa25.26■■□□□ 1.63
CPSF4-209ENST00000465132 C14orf93Q9H972 538 aaKnown RBP25.26■■□□□ 1.63
CPSF4-209ENST00000465132 ATRNO75882 1429 aa25.25■■□□□ 1.63
CPSF4-209ENST00000465132 NRXN1Q9ULB1 1477 aa25.24■■□□□ 1.63
CPSF4-209ENST00000465132 CCER1Q8TC90 406 aaPredicted RBP25.23■■□□□ 1.63
CPSF4-209ENST00000465132 FMN2Q9NZ56 1722 aa25.23■■□□□ 1.63
CPSF4-209ENST00000465132 BCL9LQ86UU0 1499 aa25.21■■□□□ 1.63
CPSF4-209ENST00000465132 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
CPSF4-209ENST00000465132 ATAD2Q6PL18 1390 aa25.2■■□□□ 1.63
CPSF4-209ENST00000465132 SPATA31A3Q5VYP0 1347 aa25.19■■□□□ 1.62
CPSF4-209ENST00000465132 KIF1AQ12756 1690 aa25.18■■□□□ 1.62
CPSF4-209ENST00000465132 KRT28Q7Z3Y7 464 aa25.17■■□□□ 1.62
CPSF4-209ENST00000465132 MARF1Q9Y4F3 1742 aaKnown RBP25.16■■□□□ 1.62
CPSF4-209ENST00000465132 PHF8Q9UPP1 1060 aa25.15■■□□□ 1.62
CPSF4-209ENST00000465132 PRAM1Q96QH2 718 aa25.14■■□□□ 1.62
CPSF4-209ENST00000465132 SAFB2Q14151 953 aaKnown RBP eCLIP25.13■■□□□ 1.61
CPSF4-209ENST00000465132 GJD4Q96KN9 370 aaPredicted RBP25.13■■□□□ 1.61
CPSF4-209ENST00000465132 PSME1Q06323 249 aa25.11■■□□□ 1.61
CPSF4-209ENST00000465132 UNC5CLQ8IV45 518 aa25.11■■□□□ 1.61
CPSF4-209ENST00000465132 SLIT2O94813 1529 aa25.11■■□□□ 1.61
CPSF4-209ENST00000465132 STAC3Q96MF2 364 aa25.1■■□□□ 1.61
CPSF4-209ENST00000465132 DLC1Q96QB1 1528 aa25.1■■□□□ 1.61
CPSF4-209ENST00000465132 TNS3Q68CZ2 1445 aa25.1■■□□□ 1.61
CPSF4-209ENST00000465132 POGKQ9P215 609 aa25.09■■□□□ 1.61
CPSF4-209ENST00000465132 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.08■■□□□ 1.61
CPSF4-209ENST00000465132 RGPD8O14715 1765 aaPredicted RBP25.08■■□□□ 1.6
CPSF4-209ENST00000465132 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
CPSF4-209ENST00000465132 USP32Q8NFA0 1604 aa25.07■■□□□ 1.6
CPSF4-209ENST00000465132 ADGRB1O14514 1584 aa25.06■■□□□ 1.6
CPSF4-209ENST00000465132 ANKARQ7Z5J8 1434 aa25.05■■□□□ 1.6
CPSF4-209ENST00000465132 RALGAPBQ86X10 1494 aa25.05■■□□□ 1.6
CPSF4-209ENST00000465132 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
CPSF4-209ENST00000465132 CABLES1Q8TDN4 633 aa25.05■■□□□ 1.6
CPSF4-209ENST00000465132 TIMELESSQ9UNS1 1208 aa25.05■■□□□ 1.6
CPSF4-209ENST00000465132 NEUROD1Q13562 356 aa25.04■■□□□ 1.6
CPSF4-209ENST00000465132 GLI3P10071 1580 aa25.03■■□□□ 1.6
CPSF4-209ENST00000465132 CCDC125Q86Z20 511 aa25.03■■□□□ 1.6
CPSF4-209ENST00000465132 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
CPSF4-209ENST00000465132 ARHGEF10O15013 1369 aa25.03■■□□□ 1.6
CPSF4-209ENST00000465132 ADGRB2O60241 1585 aa25.02■■□□□ 1.6
CPSF4-209ENST00000465132 LMOD2Q6P5Q4 547 aa25.02■■□□□ 1.6
CPSF4-209ENST00000465132 PMFBP1Q8TBY8 1022 aa25.02■■□□□ 1.6
CPSF4-209ENST00000465132 KDM2AQ9Y2K7 1162 aa25.02■■□□□ 1.6
CPSF4-209ENST00000465132 PLEKHG5O94827 1062 aa25.01■■□□□ 1.59
CPSF4-209ENST00000465132 DCAF11Q8TEB1 546 aa25.01■■□□□ 1.59
CPSF4-209ENST00000465132 TONSLQ96HA7 1378 aa25.01■■□□□ 1.59
CPSF4-209ENST00000465132 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
CPSF4-209ENST00000465132 HIRIP3Q9BW71 556 aaPredicted RBP25■■□□□ 1.59
CPSF4-209ENST00000465132 VPS72Q15906 364 aa24.99■■□□□ 1.59
CPSF4-209ENST00000465132 MINK1Q8N4C8 1332 aaPredicted RBP24.98■■□□□ 1.59
CPSF4-209ENST00000465132 PRR36Q9H6K5 1346 aa24.96■■□□□ 1.59
CPSF4-209ENST00000465132 ABCA3Q99758 1704 aa24.95■■□□□ 1.59
CPSF4-209ENST00000465132 EIF3AQ14152 1382 aaKnown RBP24.95■■□□□ 1.59
CPSF4-209ENST00000465132 ZRANB1Q9UGI0 708 aa24.95■■□□□ 1.58
CPSF4-209ENST00000465132 FAM83GA6ND36 823 aa24.94■■□□□ 1.58
CPSF4-209ENST00000465132 WASLO00401 505 aaPredicted RBP24.94■■□□□ 1.58
CPSF4-209ENST00000465132 SEPT12Q8IYM1 358 aa24.94■■□□□ 1.58
CPSF4-209ENST00000465132 TULP4Q9NRJ4 1543 aa24.94■■□□□ 1.58
CPSF4-209ENST00000465132 NWD2Q9ULI1 1742 aa24.94■■□□□ 1.58
CPSF4-209ENST00000465132 PLCH1Q4KWH8 1693 aa24.94■■□□□ 1.58
CPSF4-209ENST00000465132 GPRASP1Q5JY77 1395 aa24.93■■□□□ 1.58
CPSF4-209ENST00000465132 EP400Q96L91 3159 aa24.93■■□□□ 1.58
CPSF4-209ENST00000465132 ONECUT3O60422 494 aaPredicted RBP24.92■■□□□ 1.58
CPSF4-209ENST00000465132 CCDC9Q9Y3X0 531 aaKnown RBP24.92■■□□□ 1.58
CPSF4-209ENST00000465132 BLMP54132 1417 aaPredicted RBP24.92■■□□□ 1.58
CPSF4-209ENST00000465132 TRPM3Q9HCF6 1732 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms