RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 CLCN1P35523 988 aa4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 GIGYF2Q6Y7W6 1299 aaKnown RBP4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 RBM46Q8TBY0 533 aaKnown RBP4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 GOPCQ9HD26 462 aa4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 GPCPD1Q9NPB8 672 aa4.16□□□□□ -1.74
NUCKS1-202ENST00000464938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 MDM2Q00987 491 aaPredicted RBP4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 INSM1Q01101 510 aaPredicted RBP4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 IL27Q8NEV9 243 aa4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 DDRGK1Q96HY6 314 aa4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 FAM217BQ9NTX9 383 aaPredicted RBP4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 GTF3C3Q9Y5Q9 886 aa4.15□□□□□ -1.75
NUCKS1-202ENST00000464938 RCCD1A6NED2 376 aa4.14□□□□□ -1.75
NUCKS1-202ENST00000464938 C11orf95C9JLR9 678 aaPredicted RBP4.14□□□□□ -1.75
NUCKS1-202ENST00000464938 SSTR3P32745 418 aaPredicted RBP4.14□□□□□ -1.75
NUCKS1-202ENST00000464938 CTC1Q2NKJ3 1217 aa4.14□□□□□ -1.75
NUCKS1-202ENST00000464938 TMEM134Q9H6X4 195 aa4.14□□□□□ -1.75
NUCKS1-202ENST00000464938 AXIN1O15169 862 aa4.13□□□□□ -1.75
NUCKS1-202ENST00000464938 SLC10A3P09131 477 aa4.13□□□□□ -1.75
NUCKS1-202ENST00000464938 TTLL12Q14166 644 aaPredicted RBP4.13□□□□□ -1.75
NUCKS1-202ENST00000464938 NLRP7Q8WX94 980 aa4.13□□□□□ -1.75
NUCKS1-202ENST00000464938 SLC6A16Q9GZN6 736 aa4.13□□□□□ -1.75
NUCKS1-202ENST00000464938 TERTO14746 1132 aaKnown RBP4.12□□□□□ -1.75
NUCKS1-202ENST00000464938 CFHP08603 1231 aa4.12□□□□□ -1.75
NUCKS1-202ENST00000464938 DNAJB2P25686 324 aa4.12□□□□□ -1.75
NUCKS1-202ENST00000464938 RPIAP49247 311 aa4.12□□□□□ -1.75
NUCKS1-202ENST00000464938 FOXC1Q12948 553 aa4.12□□□□□ -1.75
NUCKS1-202ENST00000464938 SNRPBP14678 240 aaKnown RBP4.11□□□□□ -1.75
NUCKS1-202ENST00000464938 CD46P15529 392 aa4.11□□□□□ -1.75
NUCKS1-202ENST00000464938 SLC4A3P48751 1232 aa4.11□□□□□ -1.75
NUCKS1-202ENST00000464938 SH3D19Q5HYK7 790 aa4.11□□□□□ -1.75
NUCKS1-202ENST00000464938 SCUBE3Q8IX30 993 aa4.11□□□□□ -1.75
NUCKS1-202ENST00000464938 BEGAINQ9BUH8 593 aa4.11□□□□□ -1.75
NUCKS1-202ENST00000464938 NR1I2O75469 434 aa4.1□□□□□ -1.75
NUCKS1-202ENST00000464938 KMT5BQ4FZB7 885 aa4.1□□□□□ -1.75
NUCKS1-202ENST00000464938 TRIM47Q96LD4 638 aa4.1□□□□□ -1.75
NUCKS1-202ENST00000464938 ATP13A2Q9NQ11 1180 aa4.1□□□□□ -1.75
NUCKS1-202ENST00000464938 SMPD1P17405 629 aa4.09□□□□□ -1.75
NUCKS1-202ENST00000464938 SKIV2LQ15477 1246 aaKnown RBP4.09□□□□□ -1.75
NUCKS1-202ENST00000464938 THAP11Q96EK4 314 aa4.09□□□□□ -1.75
NUCKS1-202ENST00000464938 GJA5P36382 358 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 TUSC1Q2TAM9 212 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 MYSM1Q5VVJ2 828 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 SULF1Q8IWU6 871 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 CYP4X1Q8N118 509 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 SPSB2Q99619 263 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 TBC1D2Q9BYX2 928 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 RSPH6AQ9H0K4 717 aa4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 FCF1Q9Y324 198 aaKnown RBP4.08□□□□□ -1.76
NUCKS1-202ENST00000464938 GCGRP47871 477 aa4.07□□□□□ -1.76
NUCKS1-202ENST00000464938 DIXDC1Q155Q3 683 aa4.07□□□□□ -1.76
NUCKS1-202ENST00000464938 ERICH6Q7L0X2 663 aa4.07□□□□□ -1.76
NUCKS1-202ENST00000464938 FAM160A2Q8N612 972 aaPredicted RBP4.07□□□□□ -1.76
NUCKS1-202ENST00000464938 SPIRE2Q8WWL2 714 aa4.07□□□□□ -1.76
NUCKS1-202ENST00000464938 DDX11L8A8MPP1 907 aa4.06□□□□□ -1.76
NUCKS1-202ENST00000464938 WNT7AO00755 349 aa4.06□□□□□ -1.76
NUCKS1-202ENST00000464938 SPTLC1O15269 473 aa4.06□□□□□ -1.76
NUCKS1-202ENST00000464938 PUS10Q3MIT2 529 aaKnown RBP4.06□□□□□ -1.76
NUCKS1-202ENST00000464938 PROCA1Q8NCQ7 364 aaPredicted RBP4.06□□□□□ -1.76
NUCKS1-202ENST00000464938 TIMELESSQ9UNS1 1208 aa4.06□□□□□ -1.76
NUCKS1-202ENST00000464938 CD2BP2O95400 341 aaKnown RBP4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 GMPRP36959 345 aa4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 USP46P62068 366 aa4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 SUZ12Q15022 739 aaKnown RBP4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 MORN1Q5T089 497 aa4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 FBXO31Q5XUX0 539 aaPredicted RBP4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 PPP2R2DQ66LE6 453 aa4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 PCMTD1Q96MG8 357 aaPredicted RBP4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 SENP2Q9HC62 589 aa4.05□□□□□ -1.76
NUCKS1-202ENST00000464938 KDM4AO75164 1064 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 GSK3AP49840 483 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 RSPH4AQ5TD94 716 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 RSBN1LQ6PCB5 846 aaPredicted RBP4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 RIC3Q7Z5B4 369 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 SNIP1Q8TAD8 396 aaKnown RBP4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 PRDM9Q9NQV7 894 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 POLR3EQ9NVU0 708 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 LIMD1Q9UGP4 676 aa4.04□□□□□ -1.76
NUCKS1-202ENST00000464938 TTC24A2A3L6 582 aaPredicted RBP4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 MOXD2PA6NHM9 499 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 J3QL48 77 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 LILRB3O75022 631 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 CLK2P49760 499 aaKnown RBP4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 NPAS3Q8IXF0 933 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 ZSCAN1Q8NBB4 408 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 HPS1Q92902 700 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 KIFC2Q96AC6 838 aa4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 SALL2Q9Y467 1007 aaPredicted RBP4.03□□□□□ -1.76
NUCKS1-202ENST00000464938 HOXA2O43364 376 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 NDUFV2P19404 249 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 NUTM1Q86Y26 1132 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 RDH13Q8NBN7 331 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 MRGPRX2Q96LB1 330 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 NXF1Q9UBU9 619 aaKnown RBP4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 PCDHGC3Q9UN70 934 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 PCDHB15Q9Y5E8 787 aa4.02□□□□□ -1.77
NUCKS1-202ENST00000464938 ERBB4Q15303 1308 aa4.01□□□□□ -1.77
NUCKS1-202ENST00000464938 FAM181BA6NEQ2 426 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms