RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 WAPLQ7Z5K2 1190 aa37.99■■■■□ 3.67
U2AF1-206ENST00000464750 PLEKHH1Q9ULM0 1364 aa37.98■■■■□ 3.67
U2AF1-206ENST00000464750 CFAP70Q5T0N1 1121 aa37.97■■■■□ 3.67
U2AF1-206ENST00000464750 ORAI2Q96SN7 254 aa37.97■■■■□ 3.67
U2AF1-206ENST00000464750 POTEAQ6S8J7 498 aa37.95■■■■□ 3.67
U2AF1-206ENST00000464750 MEX3CQ5U5Q3 659 aaKnown RBP37.94■■■■□ 3.66
U2AF1-206ENST00000464750 LRRC59Q96AG4 307 aaKnown RBP37.94■■■■□ 3.66
U2AF1-206ENST00000464750 FMN2Q9NZ56 1722 aa37.92■■■■□ 3.66
U2AF1-206ENST00000464750 DHX57Q6P158 1386 aaKnown RBP37.92■■■■□ 3.66
U2AF1-206ENST00000464750 PNPLA6Q8IY17 1366 aa37.9■■■■□ 3.66
U2AF1-206ENST00000464750 NUTM2BA6NNL0 878 aaPredicted RBP37.89■■■■□ 3.66
U2AF1-206ENST00000464750 NUTM2EB1AL46 878 aaPredicted RBP37.89■■■■□ 3.66
U2AF1-206ENST00000464750 NUTM2AQ8IVF1 878 aaPredicted RBP37.89■■■■□ 3.66
U2AF1-206ENST00000464750 ADGRB1O14514 1584 aa37.87■■■■□ 3.65
U2AF1-206ENST00000464750 SIRT1Q96EB6 747 aa37.86■■■■□ 3.65
U2AF1-206ENST00000464750 SOS2Q07890 1332 aaPredicted RBP37.86■■■■□ 3.65
U2AF1-206ENST00000464750 DCAF11Q8TEB1 546 aa37.85■■■■□ 3.65
U2AF1-206ENST00000464750 DLC1Q96QB1 1528 aa37.84■■■■□ 3.65
U2AF1-206ENST00000464750 ESCO1Q5FWF5 840 aa37.84■■■■□ 3.65
U2AF1-206ENST00000464750 KDM2AQ9Y2K7 1162 aa37.84■■■■□ 3.65
U2AF1-206ENST00000464750 NUTM2FA1L443 756 aa37.81■■■■□ 3.64
U2AF1-206ENST00000464750 NPHP3Q7Z494 1330 aa37.78■■■■□ 3.64
U2AF1-206ENST00000464750 KIF1AQ12756 1690 aa37.78■■■■□ 3.64
U2AF1-206ENST00000464750 PRAM1Q96QH2 718 aa37.77■■■■□ 3.64
U2AF1-206ENST00000464750 PXDNQ92626 1479 aa37.77■■■■□ 3.64
U2AF1-206ENST00000464750 ZNF772Q68DY9 489 aaPredicted RBP37.76■■■■□ 3.64
U2AF1-206ENST00000464750 STAC3Q96MF2 364 aa37.76■■■■□ 3.64
U2AF1-206ENST00000464750 RGPD8O14715 1765 aaPredicted RBP37.75■■■■□ 3.63
U2AF1-206ENST00000464750 COL22A1Q8NFW1 1626 aaPredicted RBP37.75■■■■□ 3.63
U2AF1-206ENST00000464750 SAFB2Q14151 953 aaKnown RBP eCLIP37.73■■■■□ 3.63
U2AF1-206ENST00000464750 ADGRB2O60241 1585 aa37.72■■■■□ 3.63
U2AF1-206ENST00000464750 FOXO3O43524 673 aa37.7■■■■□ 3.63
U2AF1-206ENST00000464750 POGKQ9P215 609 aa37.7■■■■□ 3.63
U2AF1-206ENST00000464750 TRAK1Q9UPV9 953 aa37.69■■■■□ 3.62
U2AF1-206ENST00000464750 AFF2P51816 1311 aa37.68■■■■□ 3.62
U2AF1-206ENST00000464750 XPCQ01831 940 aaPredicted RBP37.67■■■■□ 3.62
U2AF1-206ENST00000464750 C8orf37Q96NL8 207 aa37.66■■■■□ 3.62
U2AF1-206ENST00000464750 ARHGEF28Q8N1W1 1705 aaKnown RBP37.65■■■■□ 3.62
U2AF1-206ENST00000464750 USP32Q8NFA0 1604 aa37.63■■■■□ 3.61
U2AF1-206ENST00000464750 ADAMTS2O95450 1211 aa37.63■■■■□ 3.61
U2AF1-206ENST00000464750 KIAA1210Q9ULL0 1709 aa37.62■■■■□ 3.61
U2AF1-206ENST00000464750 ANKARQ7Z5J8 1434 aa37.59■■■■□ 3.61
U2AF1-206ENST00000464750 PHF8Q9UPP1 1060 aa37.57■■■■□ 3.6
U2AF1-206ENST00000464750 MARF1Q9Y4F3 1742 aaKnown RBP37.56■■■■□ 3.6
U2AF1-206ENST00000464750 MINK1Q8N4C8 1332 aaPredicted RBP37.56■■■■□ 3.6
U2AF1-206ENST00000464750 HIRIP3Q9BW71 556 aaPredicted RBP37.55■■■■□ 3.6
U2AF1-206ENST00000464750 RXRBP28702 533 aa37.54■■■■□ 3.6
U2AF1-206ENST00000464750 NGLY1Q96IV0 654 aa37.54■■■■□ 3.6
U2AF1-206ENST00000464750 TULP4Q9NRJ4 1543 aa37.51■■■■□ 3.6
U2AF1-206ENST00000464750 KRT28Q7Z3Y7 464 aa37.51■■■■□ 3.6
U2AF1-206ENST00000464750 SPATA31A3Q5VYP0 1347 aa37.51■■■■□ 3.6
U2AF1-206ENST00000464750 EIF3AQ14152 1382 aaKnown RBP37.51■■■■□ 3.59
U2AF1-206ENST00000464750 CDK12Q9NYV4 1490 aaPredicted RBP37.5■■■■□ 3.59
U2AF1-206ENST00000464750 TNS3Q68CZ2 1445 aa37.48■■■■□ 3.59
U2AF1-206ENST00000464750 QTRT2Q9H974 415 aaKnown RBP37.45■■■■□ 3.59
U2AF1-206ENST00000464750 WASLO00401 505 aaPredicted RBP37.44■■■■□ 3.58
U2AF1-206ENST00000464750 PSME1Q06323 249 aa37.44■■■■□ 3.58
U2AF1-206ENST00000464750 PMFBP1Q8TBY8 1022 aa37.44■■■■□ 3.58
U2AF1-206ENST00000464750 PRR36Q9H6K5 1346 aa37.43■■■■□ 3.58
U2AF1-206ENST00000464750 ITSN1Q15811 1721 aa37.42■■■■□ 3.58
U2AF1-206ENST00000464750 USP21Q9UK80 565 aa37.41■■■■□ 3.58
U2AF1-206ENST00000464750 SBNO1A3KN83 1393 aa37.41■■■■□ 3.58
U2AF1-206ENST00000464750 RBM6P78332 1123 aaKnown RBP37.4■■■■□ 3.58
U2AF1-206ENST00000464750 FNBP4Q8N3X1 1017 aaPredicted RBP37.4■■■■□ 3.58
U2AF1-206ENST00000464750 ABCA3Q99758 1704 aa37.4■■■■□ 3.58
U2AF1-206ENST00000464750 TRPM3Q9HCF6 1732 aaPredicted RBP37.4■■■■□ 3.58
U2AF1-206ENST00000464750 RGS12O14924 1447 aa37.39■■■■□ 3.58
U2AF1-206ENST00000464750 NBPF1Q3BBV0 1214 aa37.38■■■■□ 3.57
U2AF1-206ENST00000464750 SIN3AQ96ST3 1273 aa37.37■■■■□ 3.57
U2AF1-206ENST00000464750 ATP7BP35670 1465 aa37.37■■■■□ 3.57
U2AF1-206ENST00000464750 L3MBTL2Q969R5 705 aa37.35■■■■□ 3.57
U2AF1-206ENST00000464750 ATRNO75882 1429 aa37.35■■■■□ 3.57
U2AF1-206ENST00000464750 ARHGEF10O15013 1369 aa37.34■■■■□ 3.57
U2AF1-206ENST00000464750 TRPC5Q9UL62 973 aaPredicted RBP37.34■■■■□ 3.57
U2AF1-206ENST00000464750 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.33■■■■□ 3.57
U2AF1-206ENST00000464750 ALS2Q96Q42 1657 aa37.32■■■■□ 3.57
U2AF1-206ENST00000464750 LMOD2Q6P5Q4 547 aa37.32■■■■□ 3.56
U2AF1-206ENST00000464750 BCL9LQ86UU0 1499 aa37.31■■■■□ 3.56
U2AF1-206ENST00000464750 TOPAZ1Q8N9V7 1692 aa37.31■■■■□ 3.56
U2AF1-206ENST00000464750 GPRASP1Q5JY77 1395 aa37.3■■■■□ 3.56
U2AF1-206ENST00000464750 TRPM1Q7Z4N2 1603 aa37.3■■■■□ 3.56
U2AF1-206ENST00000464750 HAP1P54257 671 aaPredicted RBP37.29■■■■□ 3.56
U2AF1-206ENST00000464750 NEUROD1Q13562 356 aa37.29■■■■□ 3.56
U2AF1-206ENST00000464750 PLEKHG5O94827 1062 aa37.27■■■■□ 3.56
U2AF1-206ENST00000464750 CABLES1Q8TDN4 633 aa37.27■■■■□ 3.56
U2AF1-206ENST00000464750 QRICH2Q9H0J4 1663 aa37.27■■■■□ 3.56
U2AF1-206ENST00000464750 NUDT16Q96DE0 195 aaKnown RBP37.26■■■■□ 3.56
U2AF1-206ENST00000464750 SLIT2O94813 1529 aa37.26■■■■□ 3.55
U2AF1-206ENST00000464750 NGDNQ8NEJ9 315 aaKnown RBP37.25■■■■□ 3.55
U2AF1-206ENST00000464750 CDK19Q9BWU1 502 aa37.25■■■■□ 3.55
U2AF1-206ENST00000464750 PLCH1Q4KWH8 1693 aa37.25■■■■□ 3.55
U2AF1-206ENST00000464750 CENPJQ9HC77 1338 aaPredicted RBP37.22■■■■□ 3.55
U2AF1-206ENST00000464750 UPF1Q92900 1129 aaKnown RBP eCLIP37.22■■■■□ 3.55
U2AF1-206ENST00000464750 NWD2Q9ULI1 1742 aa37.2■■■■□ 3.55
U2AF1-206ENST00000464750 CRYBG1Q9Y4K1 1723 aa37.19■■■■□ 3.54
U2AF1-206ENST00000464750 UNC5CLQ8IV45 518 aa37.17■■■■□ 3.54
U2AF1-206ENST00000464750 GLI3P10071 1580 aa37.13■■■■□ 3.53
U2AF1-206ENST00000464750 PAK3O75914 559 aaPredicted RBP37.13■■■■□ 3.53
U2AF1-206ENST00000464750 CCDC61Q9Y6R9 512 aa37.13■■■■□ 3.53
U2AF1-206ENST00000464750 TRIM26Q12899 539 aaPredicted RBP37.12■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms