RNA–Protein interactions for RNA: ENST00000464626.1

MCF2L2-206, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 4

Gene MCF2L2, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-206ENST00000464626 KNDC1Q76NI1 1749 aa28.86■■■□□ 2.21
MCF2L2-206ENST00000464626 ABCC11Q96J66 1382 aa28.86■■■□□ 2.21
MCF2L2-206ENST00000464626 AFF2P51816 1311 aa28.82■■■□□ 2.2
MCF2L2-206ENST00000464626 NRXN1Q9ULB1 1477 aa28.8■■■□□ 2.2
MCF2L2-206ENST00000464626 RAB3GAP2Q9H2M9 1393 aa28.8■■■□□ 2.2
MCF2L2-206ENST00000464626 STK26Q9P289 416 aa28.8■■■□□ 2.2
MCF2L2-206ENST00000464626 CDK12Q9NYV4 1490 aaPredicted RBP28.79■■■□□ 2.2
MCF2L2-206ENST00000464626 RXRBP28702 533 aa28.79■■■□□ 2.2
MCF2L2-206ENST00000464626 MYOM2P54296 1465 aa28.78■■■□□ 2.2
MCF2L2-206ENST00000464626 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
MCF2L2-206ENST00000464626 TMEM132EQ6IEE7 984 aa28.78■■■□□ 2.2
MCF2L2-206ENST00000464626 WAPLQ7Z5K2 1190 aa28.78■■■□□ 2.2
MCF2L2-206ENST00000464626 SIRT1Q96EB6 747 aa28.77■■■□□ 2.2
MCF2L2-206ENST00000464626 C14orf93Q9H972 538 aaKnown RBP28.77■■■□□ 2.2
MCF2L2-206ENST00000464626 NPHP3Q7Z494 1330 aa28.76■■■□□ 2.19
MCF2L2-206ENST00000464626 COL22A1Q8NFW1 1626 aaPredicted RBP28.76■■■□□ 2.19
MCF2L2-206ENST00000464626 ESCO1Q5FWF5 840 aa28.75■■■□□ 2.19
MCF2L2-206ENST00000464626 C8orf37Q96NL8 207 aa28.75■■■□□ 2.19
MCF2L2-206ENST00000464626 PLEKHH1Q9ULM0 1364 aa28.75■■■□□ 2.19
MCF2L2-206ENST00000464626 PXDNQ92626 1479 aa28.72■■■□□ 2.19
MCF2L2-206ENST00000464626 FMN2Q9NZ56 1722 aa28.71■■■□□ 2.19
MCF2L2-206ENST00000464626 ADAMTS2O95450 1211 aa28.69■■■□□ 2.18
MCF2L2-206ENST00000464626 DHX57Q6P158 1386 aaKnown RBP28.69■■■□□ 2.18
MCF2L2-206ENST00000464626 NGLY1Q96IV0 654 aa28.68■■■□□ 2.18
MCF2L2-206ENST00000464626 QTRT2Q9H974 415 aaKnown RBP28.68■■■□□ 2.18
MCF2L2-206ENST00000464626 FOXO3O43524 673 aa28.67■■■□□ 2.18
MCF2L2-206ENST00000464626 HRCP23327 699 aa28.67■■■□□ 2.18
MCF2L2-206ENST00000464626 RBM6P78332 1123 aaKnown RBP28.67■■■□□ 2.18
MCF2L2-206ENST00000464626 CFAP70Q5T0N1 1121 aa28.67■■■□□ 2.18
MCF2L2-206ENST00000464626 KIF1AQ12756 1690 aa28.65■■■□□ 2.18
MCF2L2-206ENST00000464626 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
MCF2L2-206ENST00000464626 NUTM2FA1L443 756 aa28.63■■■□□ 2.17
MCF2L2-206ENST00000464626 FNBP4Q8N3X1 1017 aaPredicted RBP28.63■■■□□ 2.17
MCF2L2-206ENST00000464626 DLC1Q96QB1 1528 aa28.63■■■□□ 2.17
MCF2L2-206ENST00000464626 RGS12O14924 1447 aa28.6■■■□□ 2.17
MCF2L2-206ENST00000464626 XPCQ01831 940 aaPredicted RBP28.59■■■□□ 2.17
MCF2L2-206ENST00000464626 USP21Q9UK80 565 aa28.59■■■□□ 2.17
MCF2L2-206ENST00000464626 MARF1Q9Y4F3 1742 aaKnown RBP28.59■■■□□ 2.17
MCF2L2-206ENST00000464626 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
MCF2L2-206ENST00000464626 STAC3Q96MF2 364 aa28.58■■■□□ 2.17
MCF2L2-206ENST00000464626 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
MCF2L2-206ENST00000464626 RGPD8O14715 1765 aaPredicted RBP28.57■■■□□ 2.16
MCF2L2-206ENST00000464626 TRPC5Q9UL62 973 aaPredicted RBP28.56■■■□□ 2.16
MCF2L2-206ENST00000464626 SPATA31A3Q5VYP0 1347 aa28.55■■■□□ 2.16
MCF2L2-206ENST00000464626 ATRNO75882 1429 aa28.54■■■□□ 2.16
MCF2L2-206ENST00000464626 PHF8Q9UPP1 1060 aa28.53■■■□□ 2.16
MCF2L2-206ENST00000464626 ADGRB2O60241 1585 aa28.53■■■□□ 2.16
MCF2L2-206ENST00000464626 KRT28Q7Z3Y7 464 aa28.52■■■□□ 2.16
MCF2L2-206ENST00000464626 POGKQ9P215 609 aa28.51■■■□□ 2.15
MCF2L2-206ENST00000464626 ANKARQ7Z5J8 1434 aa28.51■■■□□ 2.15
MCF2L2-206ENST00000464626 DCAF11Q8TEB1 546 aa28.5■■■□□ 2.15
MCF2L2-206ENST00000464626 BCL9LQ86UU0 1499 aa28.5■■■□□ 2.15
MCF2L2-206ENST00000464626 SAFB2Q14151 953 aaKnown RBP eCLIP28.49■■■□□ 2.15
MCF2L2-206ENST00000464626 PSME1Q06323 249 aa28.48■■■□□ 2.15
MCF2L2-206ENST00000464626 TNS3Q68CZ2 1445 aa28.47■■■□□ 2.15
MCF2L2-206ENST00000464626 KDM2AQ9Y2K7 1162 aa28.47■■■□□ 2.15
MCF2L2-206ENST00000464626 USP32Q8NFA0 1604 aa28.47■■■□□ 2.15
MCF2L2-206ENST00000464626 SBNO1A3KN83 1393 aa28.46■■■□□ 2.15
MCF2L2-206ENST00000464626 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
MCF2L2-206ENST00000464626 TRAK1Q9UPV9 953 aa28.45■■■□□ 2.14
MCF2L2-206ENST00000464626 SLIT2O94813 1529 aa28.43■■■□□ 2.14
MCF2L2-206ENST00000464626 EIF3AQ14152 1382 aaKnown RBP28.42■■■□□ 2.14
MCF2L2-206ENST00000464626 ATAD2Q6PL18 1390 aa28.41■■■□□ 2.14
MCF2L2-206ENST00000464626 ARHGEF10O15013 1369 aa28.39■■■□□ 2.14
MCF2L2-206ENST00000464626 GJD4Q96KN9 370 aaPredicted RBP28.39■■■□□ 2.14
MCF2L2-206ENST00000464626 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
MCF2L2-206ENST00000464626 TULP4Q9NRJ4 1543 aa28.38■■■□□ 2.13
MCF2L2-206ENST00000464626 HIRIP3Q9BW71 556 aaPredicted RBP28.37■■■□□ 2.13
MCF2L2-206ENST00000464626 ABCA3Q99758 1704 aa28.36■■■□□ 2.13
MCF2L2-206ENST00000464626 WASLO00401 505 aaPredicted RBP28.36■■■□□ 2.13
MCF2L2-206ENST00000464626 PMFBP1Q8TBY8 1022 aa28.36■■■□□ 2.13
MCF2L2-206ENST00000464626 MINK1Q8N4C8 1332 aaPredicted RBP28.36■■■□□ 2.13
MCF2L2-206ENST00000464626 ARHGEF28Q8N1W1 1705 aaKnown RBP28.35■■■□□ 2.13
MCF2L2-206ENST00000464626 PRR36Q9H6K5 1346 aa28.35■■■□□ 2.13
MCF2L2-206ENST00000464626 TRPM3Q9HCF6 1732 aaPredicted RBP28.35■■■□□ 2.13
MCF2L2-206ENST00000464626 NWD2Q9ULI1 1742 aa28.32■■■□□ 2.12
MCF2L2-206ENST00000464626 KIAA1210Q9ULL0 1709 aa28.32■■■□□ 2.12
MCF2L2-206ENST00000464626 HAP1P54257 671 aaPredicted RBP28.32■■■□□ 2.12
MCF2L2-206ENST00000464626 CABLES1Q8TDN4 633 aa28.32■■■□□ 2.12
MCF2L2-206ENST00000464626 RALGAPBQ86X10 1494 aa28.32■■■□□ 2.12
MCF2L2-206ENST00000464626 GLI3P10071 1580 aa28.32■■■□□ 2.12
MCF2L2-206ENST00000464626 ALS2Q96Q42 1657 aa28.3■■■□□ 2.12
MCF2L2-206ENST00000464626 GPRASP1Q5JY77 1395 aa28.3■■■□□ 2.12
MCF2L2-206ENST00000464626 LMOD2Q6P5Q4 547 aa28.3■■■□□ 2.12
MCF2L2-206ENST00000464626 EP400Q96L91 3159 aa28.3■■■□□ 2.12
MCF2L2-206ENST00000464626 PLCH1Q4KWH8 1693 aa28.29■■■□□ 2.12
MCF2L2-206ENST00000464626 ITSN1Q15811 1721 aa28.26■■■□□ 2.12
MCF2L2-206ENST00000464626 VPS72Q15906 364 aa28.26■■■□□ 2.11
MCF2L2-206ENST00000464626 ATP7BP35670 1465 aa28.25■■■□□ 2.11
MCF2L2-206ENST00000464626 CCDC125Q86Z20 511 aa28.24■■■□□ 2.11
MCF2L2-206ENST00000464626 FAM83GA6ND36 823 aa28.22■■■□□ 2.11
MCF2L2-206ENST00000464626 NGDNQ8NEJ9 315 aaKnown RBP28.22■■■□□ 2.11
MCF2L2-206ENST00000464626 NUDT16Q96DE0 195 aaKnown RBP28.21■■■□□ 2.11
MCF2L2-206ENST00000464626 ONECUT3O60422 494 aaPredicted RBP28.2■■■□□ 2.1
MCF2L2-206ENST00000464626 PLEKHG5O94827 1062 aa28.2■■■□□ 2.1
MCF2L2-206ENST00000464626 CRYBG1Q9Y4K1 1723 aa28.2■■■□□ 2.1
MCF2L2-206ENST00000464626 NRAPQ86VF7 1730 aa28.18■■■□□ 2.1
MCF2L2-206ENST00000464626 BRWD3Q6RI45 1802 aa28.18■■■□□ 2.1
MCF2L2-206ENST00000464626 CDK19Q9BWU1 502 aa28.18■■■□□ 2.1
MCF2L2-206ENST00000464626 COL14A1Q05707 1796 aaKnown RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms