RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 WAPLQ7Z5K2 1190 aa11.8□□□□□ -0.52
PLD3-208ENST00000464586 POGKQ9P215 609 aa11.8□□□□□ -0.52
PLD3-208ENST00000464586 ROBO1Q9Y6N7 1651 aa11.8□□□□□ -0.52
PLD3-208ENST00000464586 CDC42BPGQ6DT37 1551 aa11.79□□□□□ -0.52
PLD3-208ENST00000464586 SLAIN2Q9P270 581 aa11.79□□□□□ -0.52
PLD3-208ENST00000464586 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
PLD3-208ENST00000464586 RGPD8O14715 1765 aaPredicted RBP11.79□□□□□ -0.52
PLD3-208ENST00000464586 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
PLD3-208ENST00000464586 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
PLD3-208ENST00000464586 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
PLD3-208ENST00000464586 PLEKHH1Q9ULM0 1364 aa11.78□□□□□ -0.52
PLD3-208ENST00000464586 QRICH2Q9H0J4 1663 aa11.77□□□□□ -0.53
PLD3-208ENST00000464586 RALGAPBQ86X10 1494 aa11.76□□□□□ -0.53
PLD3-208ENST00000464586 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
PLD3-208ENST00000464586 SAFB2Q14151 953 aaKnown RBP eCLIP11.76□□□□□ -0.53
PLD3-208ENST00000464586 MST1RQ04912 1400 aa11.76□□□□□ -0.53
PLD3-208ENST00000464586 PHLPP1O60346 1717 aa11.75□□□□□ -0.53
PLD3-208ENST00000464586 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
PLD3-208ENST00000464586 CARD11Q9BXL7 1154 aa11.74□□□□□ -0.53
PLD3-208ENST00000464586 ITSN1Q15811 1721 aa11.74□□□□□ -0.53
PLD3-208ENST00000464586 EIF3AQ14152 1382 aaKnown RBP11.73□□□□□ -0.53
PLD3-208ENST00000464586 C1orf167Q5SNV9 1468 aa11.73□□□□□ -0.53
PLD3-208ENST00000464586 NHSL1Q5SYE7 1610 aa11.73□□□□□ -0.53
PLD3-208ENST00000464586 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
PLD3-208ENST00000464586 CENPJQ9HC77 1338 aaPredicted RBP11.73□□□□□ -0.53
PLD3-208ENST00000464586 KIF1AQ12756 1690 aa11.72□□□□□ -0.53
PLD3-208ENST00000464586 AHDC1Q5TGY3 1603 aaPredicted RBP11.71□□□□□ -0.53
PLD3-208ENST00000464586 HSPA1LP34931 641 aa11.71□□□□□ -0.53
PLD3-208ENST00000464586 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
PLD3-208ENST00000464586 BRINP3Q76B58 766 aa11.7□□□□□ -0.54
PLD3-208ENST00000464586 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
PLD3-208ENST00000464586 USP32Q8NFA0 1604 aa11.7□□□□□ -0.54
PLD3-208ENST00000464586 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
PLD3-208ENST00000464586 NUTM2FA1L443 756 aa11.69□□□□□ -0.54
PLD3-208ENST00000464586 TULP4Q9NRJ4 1543 aa11.69□□□□□ -0.54
PLD3-208ENST00000464586 COL16A1Q07092 1604 aaPredicted RBP11.68□□□□□ -0.54
PLD3-208ENST00000464586 ESCO1Q5FWF5 840 aa11.68□□□□□ -0.54
PLD3-208ENST00000464586 ORAI2Q96SN7 254 aa11.68□□□□□ -0.54
PLD3-208ENST00000464586 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
PLD3-208ENST00000464586 TOPAZ1Q8N9V7 1692 aa11.66□□□□□ -0.54
PLD3-208ENST00000464586 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
PLD3-208ENST00000464586 SBNO2Q9Y2G9 1366 aa11.66□□□□□ -0.54
PLD3-208ENST00000464586 SHPRHQ149N8 1683 aa11.65□□□□□ -0.54
PLD3-208ENST00000464586 EVC2Q86UK5 1308 aa11.65□□□□□ -0.54
PLD3-208ENST00000464586 PHF8Q9UPP1 1060 aa11.65□□□□□ -0.54
PLD3-208ENST00000464586 NPHP3Q7Z494 1330 aa11.64□□□□□ -0.55
PLD3-208ENST00000464586 SRPK2P78362 688 aaKnown RBP11.64□□□□□ -0.55
PLD3-208ENST00000464586 NUDT16Q96DE0 195 aaKnown RBP11.64□□□□□ -0.55
PLD3-208ENST00000464586 USP47Q96K76 1375 aa11.64□□□□□ -0.55
PLD3-208ENST00000464586 ATP7BP35670 1465 aa11.63□□□□□ -0.55
PLD3-208ENST00000464586 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
PLD3-208ENST00000464586 LRRC59Q96AG4 307 aaKnown RBP11.63□□□□□ -0.55
PLD3-208ENST00000464586 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
PLD3-208ENST00000464586 JCADQ9P266 1359 aa11.63□□□□□ -0.55
PLD3-208ENST00000464586 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
PLD3-208ENST00000464586 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
PLD3-208ENST00000464586 FOXO3O43524 673 aa11.62□□□□□ -0.55
PLD3-208ENST00000464586 DDX17Q92841 729 aaKnown RBP11.62□□□□□ -0.55
PLD3-208ENST00000464586 CABP2Q9NPB3 220 aa11.62□□□□□ -0.55
PLD3-208ENST00000464586 PSME1Q06323 249 aa11.61□□□□□ -0.55
PLD3-208ENST00000464586 PMFBP1Q8TBY8 1022 aa11.61□□□□□ -0.55
PLD3-208ENST00000464586 AKAP12Q02952 1782 aa11.6□□□□□ -0.55
PLD3-208ENST00000464586 PXDNQ92626 1479 aa11.6□□□□□ -0.55
PLD3-208ENST00000464586 KRT28Q7Z3Y7 464 aa11.6□□□□□ -0.55
PLD3-208ENST00000464586 NGDNQ8NEJ9 315 aaKnown RBP11.6□□□□□ -0.55
PLD3-208ENST00000464586 TRPM3Q9HCF6 1732 aaPredicted RBP11.6□□□□□ -0.55
PLD3-208ENST00000464586 PPIP5K1Q6PFW1 1433 aa11.6□□□□□ -0.55
PLD3-208ENST00000464586 ATAD2Q6PL18 1390 aa11.59□□□□□ -0.55
PLD3-208ENST00000464586 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
PLD3-208ENST00000464586 EIF4G2P78344 907 aaKnown RBP eCLIP11.59□□□□□ -0.55
PLD3-208ENST00000464586 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
PLD3-208ENST00000464586 TESK2Q96S53 571 aa11.59□□□□□ -0.55
PLD3-208ENST00000464586 COL22A1Q8NFW1 1626 aaPredicted RBP11.58□□□□□ -0.56
PLD3-208ENST00000464586 XPCQ01831 940 aaPredicted RBP11.58□□□□□ -0.56
PLD3-208ENST00000464586 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
PLD3-208ENST00000464586 MARF1Q9Y4F3 1742 aaKnown RBP11.57□□□□□ -0.56
PLD3-208ENST00000464586 SBNO1A3KN83 1393 aa11.57□□□□□ -0.56
PLD3-208ENST00000464586 ALS2Q96Q42 1657 aa11.57□□□□□ -0.56
PLD3-208ENST00000464586 TMF1P82094 1093 aa11.57□□□□□ -0.56
PLD3-208ENST00000464586 MED1Q15648 1581 aaPredicted RBP11.57□□□□□ -0.56
PLD3-208ENST00000464586 ACEP12821 1306 aa11.57□□□□□ -0.56
PLD3-208ENST00000464586 POLR3AO14802 1390 aaPredicted RBP11.56□□□□□ -0.56
PLD3-208ENST00000464586 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
PLD3-208ENST00000464586 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
PLD3-208ENST00000464586 MON2Q7Z3U7 1717 aa11.56□□□□□ -0.56
PLD3-208ENST00000464586 SPATA31A3Q5VYP0 1347 aa11.56□□□□□ -0.56
PLD3-208ENST00000464586 TNS3Q68CZ2 1445 aa11.55□□□□□ -0.56
PLD3-208ENST00000464586 HSPA5P11021 654 aaKnown RBP11.55□□□□□ -0.56
PLD3-208ENST00000464586 CABP1Q9NZU7 370 aa11.55□□□□□ -0.56
PLD3-208ENST00000464586 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
PLD3-208ENST00000464586 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
PLD3-208ENST00000464586 ABCA3Q99758 1704 aa11.54□□□□□ -0.56
PLD3-208ENST00000464586 ARHGEF10O15013 1369 aa11.54□□□□□ -0.56
PLD3-208ENST00000464586 PAK3O75914 559 aaPredicted RBP11.53□□□□□ -0.56
PLD3-208ENST00000464586 LMOD2Q6P5Q4 547 aa11.53□□□□□ -0.56
PLD3-208ENST00000464586 TMC1Q8TDI8 760 aa11.53□□□□□ -0.56
PLD3-208ENST00000464586 DISP3Q9P2K9 1392 aa11.53□□□□□ -0.56
PLD3-208ENST00000464586 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
PLD3-208ENST00000464586 NUTM2BA6NNL0 878 aaPredicted RBP11.52□□□□□ -0.57
PLD3-208ENST00000464586 NUTM2EB1AL46 878 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms