RNA–Protein interactions for RNA: ENST00000464317.3

RN7SL541P-201, Transcript of RNA, 7SL, cytoplasmic 541, pseudogene, humanhuman

BASIC

Gene RN7SL541P, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL541P-201ENST00000464317 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
RN7SL541P-201ENST00000464317 FNBP4Q8N3X1 1017 aaPredicted RBP13.64□□□□□ -0.23
RN7SL541P-201ENST00000464317 FOXO3O43524 673 aa13.62□□□□□ -0.23
RN7SL541P-201ENST00000464317 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
RN7SL541P-201ENST00000464317 FOXD1Q16676 465 aa13.62□□□□□ -0.23
RN7SL541P-201ENST00000464317 STK26Q9P289 416 aa13.62□□□□□ -0.23
RN7SL541P-201ENST00000464317 PPLO60437 1756 aa13.62□□□□□ -0.23
RN7SL541P-201ENST00000464317 ATRNO75882 1429 aa13.62□□□□□ -0.23
RN7SL541P-201ENST00000464317 COL22A1Q8NFW1 1626 aaPredicted RBP13.61□□□□□ -0.23
RN7SL541P-201ENST00000464317 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
RN7SL541P-201ENST00000464317 CDC42BPGQ6DT37 1551 aa13.61□□□□□ -0.23
RN7SL541P-201ENST00000464317 ADGRF5Q8IZF2 1346 aa13.61□□□□□ -0.23
RN7SL541P-201ENST00000464317 MYOM2P54296 1465 aa13.61□□□□□ -0.23
RN7SL541P-201ENST00000464317 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
RN7SL541P-201ENST00000464317 RGL3Q3MIN7 710 aa13.6□□□□□ -0.23
RN7SL541P-201ENST00000464317 WAPLQ7Z5K2 1190 aa13.6□□□□□ -0.23
RN7SL541P-201ENST00000464317 PXDNQ92626 1479 aa13.6□□□□□ -0.23
RN7SL541P-201ENST00000464317 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
RN7SL541P-201ENST00000464317 BCL9LQ86UU0 1499 aa13.57□□□□□ -0.24
RN7SL541P-201ENST00000464317 TMEM132EQ6IEE7 984 aa13.57□□□□□ -0.24
RN7SL541P-201ENST00000464317 GJD4Q96KN9 370 aaPredicted RBP13.57□□□□□ -0.24
RN7SL541P-201ENST00000464317 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
RN7SL541P-201ENST00000464317 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
RN7SL541P-201ENST00000464317 TECPR2O15040 1411 aa13.56□□□□□ -0.24
RN7SL541P-201ENST00000464317 ABCC11Q96J66 1382 aa13.56□□□□□ -0.24
RN7SL541P-201ENST00000464317 PLEKHH1Q9ULM0 1364 aa13.56□□□□□ -0.24
RN7SL541P-201ENST00000464317 CCDC125Q86Z20 511 aa13.55□□□□□ -0.24
RN7SL541P-201ENST00000464317 SPATA31E1Q6ZUB1 1445 aa13.55□□□□□ -0.24
RN7SL541P-201ENST00000464317 UNC5CLQ8IV45 518 aa13.54□□□□□ -0.24
RN7SL541P-201ENST00000464317 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
RN7SL541P-201ENST00000464317 SPATA31A3Q5VYP0 1347 aa13.54□□□□□ -0.24
RN7SL541P-201ENST00000464317 HAP1P54257 671 aaPredicted RBP13.53□□□□□ -0.24
RN7SL541P-201ENST00000464317 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
RN7SL541P-201ENST00000464317 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
RN7SL541P-201ENST00000464317 PIK3C2GO75747 1445 aa13.52□□□□□ -0.25
RN7SL541P-201ENST00000464317 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
RN7SL541P-201ENST00000464317 KNDC1Q76NI1 1749 aa13.51□□□□□ -0.25
RN7SL541P-201ENST00000464317 PSME1Q06323 249 aa13.51□□□□□ -0.25
RN7SL541P-201ENST00000464317 KIF1AQ12756 1690 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 SLIT2O94813 1529 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 RALGAPBQ86X10 1494 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 PHF8Q9UPP1 1060 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
RN7SL541P-201ENST00000464317 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.49□□□□□ -0.25
RN7SL541P-201ENST00000464317 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
RN7SL541P-201ENST00000464317 DHX57Q6P158 1386 aaKnown RBP13.48□□□□□ -0.25
RN7SL541P-201ENST00000464317 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
RN7SL541P-201ENST00000464317 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
RN7SL541P-201ENST00000464317 CCDC9Q9Y3X0 531 aaKnown RBP13.48□□□□□ -0.25
RN7SL541P-201ENST00000464317 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 USP32Q8NFA0 1604 aa13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 GLI3P10071 1580 aa13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 SF3B2Q13435 895 aaKnown RBP13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 CFAP70Q5T0N1 1121 aa13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 CABLES1Q8TDN4 633 aa13.47□□□□□ -0.25
RN7SL541P-201ENST00000464317 VPS72Q15906 364 aa13.46□□□□□ -0.25
RN7SL541P-201ENST00000464317 PRAM1Q96QH2 718 aa13.46□□□□□ -0.25
RN7SL541P-201ENST00000464317 POGKQ9P215 609 aa13.45□□□□□ -0.26
RN7SL541P-201ENST00000464317 SBNO1A3KN83 1393 aa13.45□□□□□ -0.26
RN7SL541P-201ENST00000464317 ARHGEF10O15013 1369 aa13.45□□□□□ -0.26
RN7SL541P-201ENST00000464317 ACIN1Q9UKV3 1341 aaKnown RBP13.44□□□□□ -0.26
RN7SL541P-201ENST00000464317 NRXN1Q9ULB1 1477 aa13.44□□□□□ -0.26
RN7SL541P-201ENST00000464317 DEFB132Q7Z7B7 95 aa13.44□□□□□ -0.26
RN7SL541P-201ENST00000464317 PMFBP1Q8TBY8 1022 aa13.44□□□□□ -0.26
RN7SL541P-201ENST00000464317 EP400Q96L91 3159 aa13.43□□□□□ -0.26
RN7SL541P-201ENST00000464317 A0A0G2JS52 829 aa13.43□□□□□ -0.26
RN7SL541P-201ENST00000464317 MYT1Q01538 1121 aa13.43□□□□□ -0.26
RN7SL541P-201ENST00000464317 SRCAPQ6ZRS2 3230 aa13.43□□□□□ -0.26
RN7SL541P-201ENST00000464317 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
RN7SL541P-201ENST00000464317 RGPD8O14715 1765 aaPredicted RBP13.42□□□□□ -0.26
RN7SL541P-201ENST00000464317 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
RN7SL541P-201ENST00000464317 FAM83GA6ND36 823 aa13.41□□□□□ -0.26
RN7SL541P-201ENST00000464317 ONECUT3O60422 494 aaPredicted RBP13.41□□□□□ -0.26
RN7SL541P-201ENST00000464317 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
RN7SL541P-201ENST00000464317 PLCH1Q4KWH8 1693 aa13.4□□□□□ -0.26
RN7SL541P-201ENST00000464317 NWD2Q9ULI1 1742 aa13.4□□□□□ -0.26
RN7SL541P-201ENST00000464317 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
RN7SL541P-201ENST00000464317 HIRIP3Q9BW71 556 aaPredicted RBP13.39□□□□□ -0.27
RN7SL541P-201ENST00000464317 TRAK1Q9UPV9 953 aa13.39□□□□□ -0.27
RN7SL541P-201ENST00000464317 GPRASP1Q5JY77 1395 aa13.39□□□□□ -0.27
RN7SL541P-201ENST00000464317 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
RN7SL541P-201ENST00000464317 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
RN7SL541P-201ENST00000464317 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
RN7SL541P-201ENST00000464317 MINK1Q8N4C8 1332 aaPredicted RBP13.38□□□□□ -0.27
RN7SL541P-201ENST00000464317 EIF3AQ14152 1382 aaKnown RBP13.37□□□□□ -0.27
RN7SL541P-201ENST00000464317 BAG6P46379 1132 aa13.37□□□□□ -0.27
RN7SL541P-201ENST00000464317 KDM2AQ9Y2K7 1162 aa13.36□□□□□ -0.27
RN7SL541P-201ENST00000464317 ADGRB2O60241 1585 aa13.36□□□□□ -0.27
RN7SL541P-201ENST00000464317 PAK3O75914 559 aaPredicted RBP13.35□□□□□ -0.27
RN7SL541P-201ENST00000464317 NGDNQ8NEJ9 315 aaKnown RBP13.35□□□□□ -0.27
RN7SL541P-201ENST00000464317 ADGRB1O14514 1584 aa13.35□□□□□ -0.27
RN7SL541P-201ENST00000464317 PRR36Q9H6K5 1346 aa13.35□□□□□ -0.27
RN7SL541P-201ENST00000464317 PSDA5PKW4 1024 aaPredicted RBP13.34□□□□□ -0.27
RN7SL541P-201ENST00000464317 WASLO00401 505 aaPredicted RBP13.34□□□□□ -0.27
RN7SL541P-201ENST00000464317 DCAF11Q8TEB1 546 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms