RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ATP13A2Q9NQ11 1180 aa10.9□□□□□ -0.66
CD46-211ENST00000464082 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
CD46-211ENST00000464082 BRICD5Q6PL45 260 aa10.89□□□□□ -0.67
CD46-211ENST00000464082 INSM1Q01101 510 aaPredicted RBP10.88□□□□□ -0.67
CD46-211ENST00000464082 HIC1Q14526 733 aa10.88□□□□□ -0.67
CD46-211ENST00000464082 J3QL48 77 aa10.87□□□□□ -0.67
CD46-211ENST00000464082 ZBTB24O43167 697 aaPredicted RBP10.87□□□□□ -0.67
CD46-211ENST00000464082 RNF19BQ6ZMZ0 732 aa10.87□□□□□ -0.67
CD46-211ENST00000464082 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
CD46-211ENST00000464082 WNT7AO00755 349 aa10.86□□□□□ -0.67
CD46-211ENST00000464082 GCGRP47871 477 aa10.86□□□□□ -0.67
CD46-211ENST00000464082 RBM26Q5T8P6 1007 aaKnown RBP10.86□□□□□ -0.67
CD46-211ENST00000464082 SNIP1Q8TAD8 396 aaKnown RBP10.86□□□□□ -0.67
CD46-211ENST00000464082 SALL2Q9Y467 1007 aaPredicted RBP10.86□□□□□ -0.67
CD46-211ENST00000464082 TERTO14746 1132 aaKnown RBP10.85□□□□□ -0.67
CD46-211ENST00000464082 MRGPRX2Q96LB1 330 aa10.84□□□□□ -0.67
CD46-211ENST00000464082 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
CD46-211ENST00000464082 TRIM32Q13049 653 aa10.83□□□□□ -0.68
CD46-211ENST00000464082 MSS51Q4VC12 460 aa10.83□□□□□ -0.68
CD46-211ENST00000464082 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
CD46-211ENST00000464082 HPS1Q92902 700 aa10.82□□□□□ -0.68
CD46-211ENST00000464082 GNPATO15228 680 aa10.81□□□□□ -0.68
CD46-211ENST00000464082 RTN4Q9NQC3 1192 aaKnown RBP10.8□□□□□ -0.68
CD46-211ENST00000464082 GPR37O15354 613 aa10.79□□□□□ -0.68
CD46-211ENST00000464082 SENP2Q9HC62 589 aa10.78□□□□□ -0.68
CD46-211ENST00000464082 SHROOM4Q9ULL8 1493 aa10.78□□□□□ -0.68
CD46-211ENST00000464082 MMP16P51512 607 aa10.77□□□□□ -0.69
CD46-211ENST00000464082 SULF1Q8IWU6 871 aa10.77□□□□□ -0.69
CD46-211ENST00000464082 AMER1Q5JTC6 1135 aaPredicted RBP10.76□□□□□ -0.69
CD46-211ENST00000464082 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
CD46-211ENST00000464082 TESPA1A2RU30 521 aaPredicted RBP10.73□□□□□ -0.69
CD46-211ENST00000464082 SKOR1P84550 965 aa10.73□□□□□ -0.69
CD46-211ENST00000464082 RC3H1Q5TC82 1133 aaKnown RBP10.72□□□□□ -0.69
CD46-211ENST00000464082 KIFC2Q96AC6 838 aa10.72□□□□□ -0.69
CD46-211ENST00000464082 DXOO77932 396 aaKnown RBP10.71□□□□□ -0.69
CD46-211ENST00000464082 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
CD46-211ENST00000464082 Q3C1V9 767 aa10.7□□□□□ -0.7
CD46-211ENST00000464082 CCDC24Q8N4L8 307 aa10.7□□□□□ -0.7
CD46-211ENST00000464082 USB1Q9BQ65 265 aaKnown RBP10.7□□□□□ -0.7
CD46-211ENST00000464082 REPIN1Q9BWE0 567 aaKnown RBP10.7□□□□□ -0.7
CD46-211ENST00000464082 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
CD46-211ENST00000464082 HLA-CQ95604 372 aa10.69□□□□□ -0.7
CD46-211ENST00000464082 GMPRP36959 345 aa10.68□□□□□ -0.7
CD46-211ENST00000464082 ALDH1A1P00352 501 aa10.67□□□□□ -0.7
CD46-211ENST00000464082 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
CD46-211ENST00000464082 NXF1Q9UBU9 619 aaKnown RBP10.66□□□□□ -0.7
CD46-211ENST00000464082 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
CD46-211ENST00000464082 BMP1P13497 986 aa10.65□□□□□ -0.7
CD46-211ENST00000464082 CD46P15529 392 aa10.65□□□□□ -0.7
CD46-211ENST00000464082 VEGFBP49765 207 aa10.65□□□□□ -0.7
CD46-211ENST00000464082 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.7
CD46-211ENST00000464082 WNT7BP56706 349 aa10.64□□□□□ -0.71
CD46-211ENST00000464082 SMYD5Q6GMV2 418 aa10.64□□□□□ -0.71
CD46-211ENST00000464082 TRIM46Q7Z4K8 759 aa10.64□□□□□ -0.71
CD46-211ENST00000464082 KDM4AO75164 1064 aa10.63□□□□□ -0.71
CD46-211ENST00000464082 ZSCAN1Q8NBB4 408 aa10.62□□□□□ -0.71
CD46-211ENST00000464082 SIAH2O43255 324 aa10.61□□□□□ -0.71
CD46-211ENST00000464082 LOC100996750A0A140TA64 210 aa10.6□□□□□ -0.71
CD46-211ENST00000464082 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
CD46-211ENST00000464082 KRTAP4-6Q9BYQ5 205 aa10.6□□□□□ -0.71
CD46-211ENST00000464082 GUCA2AQ02747 115 aa10.59□□□□□ -0.71
CD46-211ENST00000464082 PTCRAQ6ISU1 281 aaPredicted RBP10.59□□□□□ -0.71
CD46-211ENST00000464082 SYMPKQ92797 1274 aaKnown RBP10.59□□□□□ -0.71
CD46-211ENST00000464082 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
CD46-211ENST00000464082 IRF7Q92985 503 aa10.58□□□□□ -0.72
CD46-211ENST00000464082 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
CD46-211ENST00000464082 H3BM21 787 aa10.56□□□□□ -0.72
CD46-211ENST00000464082 HOXA2O43364 376 aa10.56□□□□□ -0.72
CD46-211ENST00000464082 JUNDP17535 347 aa10.56□□□□□ -0.72
CD46-211ENST00000464082 GPIHBP1Q8IV16 184 aa10.55□□□□□ -0.72
CD46-211ENST00000464082 NPAS3Q8IXF0 933 aa10.55□□□□□ -0.72
CD46-211ENST00000464082 EHBP1Q8NDI1 1231 aa10.55□□□□□ -0.72
CD46-211ENST00000464082 WASF2Q9Y6W5 498 aa10.54□□□□□ -0.72
CD46-211ENST00000464082 USP46P62068 366 aa10.53□□□□□ -0.72
CD46-211ENST00000464082 CECR2Q9BXF3 1484 aa10.53□□□□□ -0.72
CD46-211ENST00000464082 MDM2Q00987 491 aaPredicted RBP10.52□□□□□ -0.73
CD46-211ENST00000464082 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
CD46-211ENST00000464082 NUDT12Q9BQG2 462 aa10.52□□□□□ -0.73
CD46-211ENST00000464082 SH3BP2P78314 561 aa10.51□□□□□ -0.73
CD46-211ENST00000464082 MAP2K5Q13163 448 aa10.47□□□□□ -0.73
CD46-211ENST00000464082 TLL2Q9Y6L7 1015 aa10.47□□□□□ -0.73
CD46-211ENST00000464082 IRF6O14896 467 aa10.46□□□□□ -0.73
CD46-211ENST00000464082 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
CD46-211ENST00000464082 SOBPA7XYQ1 873 aa10.45□□□□□ -0.74
CD46-211ENST00000464082 PCDHGC3Q9UN70 934 aa10.44□□□□□ -0.74
CD46-211ENST00000464082 LINC01559Q495D7 138 aa10.43□□□□□ -0.74
CD46-211ENST00000464082 CCNYL3P0C7X3 344 aa10.42□□□□□ -0.74
CD46-211ENST00000464082 BAP1Q92560 729 aa10.42□□□□□ -0.74
CD46-211ENST00000464082 PURBQ96QR8 312 aaKnown RBP10.42□□□□□ -0.74
CD46-211ENST00000464082 SMARCA4P51532 1647 aa10.41□□□□□ -0.74
CD46-211ENST00000464082 MS4A1P11836 297 aa10.41□□□□□ -0.74
CD46-211ENST00000464082 SUZ12Q15022 739 aaKnown RBP10.41□□□□□ -0.74
CD46-211ENST00000464082 UNC93B1Q9H1C4 597 aa10.41□□□□□ -0.74
CD46-211ENST00000464082 NNTQ13423 1086 aa10.4□□□□□ -0.74
CD46-211ENST00000464082 MRPL14Q6P1L8 145 aaKnown RBP10.4□□□□□ -0.74
CD46-211ENST00000464082 FAM217BQ9NTX9 383 aaPredicted RBP10.4□□□□□ -0.74
CD46-211ENST00000464082 C6orf229H3BNL8 230 aa10.39□□□□□ -0.75
CD46-211ENST00000464082 TIMP2P16035 220 aa10.39□□□□□ -0.75
CD46-211ENST00000464082 FDX1P10109 184 aa10.38□□□□□ -0.75
CD46-211ENST00000464082 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms