RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 DCAF11Q8TEB1 546 aa10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 MST1RQ04912 1400 aa10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 KNDC1Q76NI1 1749 aa10.81□□□□□ -0.68
THUMPD3-208ENST00000464045 JCADQ9P266 1359 aa10.8□□□□□ -0.68
THUMPD3-208ENST00000464045 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
THUMPD3-208ENST00000464045 NALCNQ8IZF0 1738 aa10.79□□□□□ -0.68
THUMPD3-208ENST00000464045 TMEM132EQ6IEE7 984 aa10.79□□□□□ -0.68
THUMPD3-208ENST00000464045 CDC42BPGQ6DT37 1551 aa10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 LRP6O75581 1613 aa10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 AHDC1Q5TGY3 1603 aaPredicted RBP10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 BRINP3Q76B58 766 aa10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 STK26Q9P289 416 aa10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 DLC1Q96QB1 1528 aa10.78□□□□□ -0.68
THUMPD3-208ENST00000464045 ADGRB1O14514 1584 aa10.77□□□□□ -0.68
THUMPD3-208ENST00000464045 COL16A1Q07092 1604 aaPredicted RBP10.77□□□□□ -0.68
THUMPD3-208ENST00000464045 DDX17Q92841 729 aaKnown RBP10.77□□□□□ -0.69
THUMPD3-208ENST00000464045 C1orf167Q5SNV9 1468 aa10.76□□□□□ -0.69
THUMPD3-208ENST00000464045 WAPLQ7Z5K2 1190 aa10.75□□□□□ -0.69
THUMPD3-208ENST00000464045 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
THUMPD3-208ENST00000464045 KIAA1210Q9ULL0 1709 aa10.73□□□□□ -0.69
THUMPD3-208ENST00000464045 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
THUMPD3-208ENST00000464045 RNF39Q9H2S5 420 aa10.73□□□□□ -0.69
THUMPD3-208ENST00000464045 NHSL1Q5SYE7 1610 aa10.73□□□□□ -0.69
THUMPD3-208ENST00000464045 POGKQ9P215 609 aa10.72□□□□□ -0.69
THUMPD3-208ENST00000464045 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
THUMPD3-208ENST00000464045 ADGRB2O60241 1585 aa10.71□□□□□ -0.69
THUMPD3-208ENST00000464045 ZNF772Q68DY9 489 aaPredicted RBP10.71□□□□□ -0.69
THUMPD3-208ENST00000464045 L3MBTL2Q969R5 705 aa10.71□□□□□ -0.69
THUMPD3-208ENST00000464045 LRRC59Q96AG4 307 aaKnown RBP10.71□□□□□ -0.69
THUMPD3-208ENST00000464045 SIN3AQ96ST3 1273 aa10.71□□□□□ -0.69
THUMPD3-208ENST00000464045 TRAK1Q9UPV9 953 aa10.71□□□□□ -0.69
THUMPD3-208ENST00000464045 EIF3AQ14152 1382 aaKnown RBP10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 AFF2P51816 1311 aa10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 NPHP3Q7Z494 1330 aa10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 RXRBP28702 533 aa10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 UPF1Q92900 1129 aaKnown RBP eCLIP10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 C8orf37Q96NL8 207 aa10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 ORAI2Q96SN7 254 aa10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 FMN2Q9NZ56 1722 aa10.7□□□□□ -0.7
THUMPD3-208ENST00000464045 SHPRHQ149N8 1683 aa10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 ANKARQ7Z5J8 1434 aa10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 SOS2Q07890 1332 aaPredicted RBP10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 ADAMTS2O95450 1211 aa10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 ESCO1Q5FWF5 840 aa10.69□□□□□ -0.7
THUMPD3-208ENST00000464045 SAFB2Q14151 953 aaKnown RBP eCLIP10.67□□□□□ -0.7
THUMPD3-208ENST00000464045 KIF1AQ12756 1690 aa10.66□□□□□ -0.7
THUMPD3-208ENST00000464045 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
THUMPD3-208ENST00000464045 WASLO00401 505 aaPredicted RBP10.66□□□□□ -0.7
THUMPD3-208ENST00000464045 NBPF1Q3BBV0 1214 aa10.66□□□□□ -0.7
THUMPD3-208ENST00000464045 ARHGEF28Q8N1W1 1705 aaKnown RBP10.66□□□□□ -0.7
THUMPD3-208ENST00000464045 PXDNQ92626 1479 aa10.66□□□□□ -0.7
THUMPD3-208ENST00000464045 TONSLQ96HA7 1378 aa10.65□□□□□ -0.7
THUMPD3-208ENST00000464045 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
THUMPD3-208ENST00000464045 TULP4Q9NRJ4 1543 aa10.65□□□□□ -0.7
THUMPD3-208ENST00000464045 NUTM2FA1L443 756 aa10.65□□□□□ -0.7
THUMPD3-208ENST00000464045 QTRT2Q9H974 415 aaKnown RBP10.65□□□□□ -0.7
THUMPD3-208ENST00000464045 CLSPNQ9HAW4 1339 aa10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 FOXO3O43524 673 aa10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 HIRIP3Q9BW71 556 aaPredicted RBP10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 PHF8Q9UPP1 1060 aa10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 TRPM1Q7Z4N2 1603 aa10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 ROCK2O75116 1388 aaKnown RBP10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 GPRASP1Q5JY77 1395 aa10.64□□□□□ -0.71
THUMPD3-208ENST00000464045 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
THUMPD3-208ENST00000464045 XPCQ01831 940 aaPredicted RBP10.63□□□□□ -0.71
THUMPD3-208ENST00000464045 PSME1Q06323 249 aa10.63□□□□□ -0.71
THUMPD3-208ENST00000464045 RGS12O14924 1447 aa10.62□□□□□ -0.71
THUMPD3-208ENST00000464045 PLEKHG5O94827 1062 aa10.62□□□□□ -0.71
THUMPD3-208ENST00000464045 KCNA4P22459 653 aa10.62□□□□□ -0.71
THUMPD3-208ENST00000464045 SBNO1A3KN83 1393 aa10.62□□□□□ -0.71
THUMPD3-208ENST00000464045 USP32Q8NFA0 1604 aa10.62□□□□□ -0.71
THUMPD3-208ENST00000464045 COL22A1Q8NFW1 1626 aaPredicted RBP10.62□□□□□ -0.71
THUMPD3-208ENST00000464045 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
THUMPD3-208ENST00000464045 PCGF6Q9BYE7 350 aa10.61□□□□□ -0.71
THUMPD3-208ENST00000464045 ATP7BP35670 1465 aa10.61□□□□□ -0.71
THUMPD3-208ENST00000464045 SPATA31A3Q5VYP0 1347 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 PRR36Q9H6K5 1346 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 NBPF8Q3BBV2 869 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 KRT28Q7Z3Y7 464 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 CDK19Q9BWU1 502 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 TIMELESSQ9UNS1 1208 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 RALGAPBQ86X10 1494 aa10.6□□□□□ -0.71
THUMPD3-208ENST00000464045 TNS3Q68CZ2 1445 aa10.59□□□□□ -0.71
THUMPD3-208ENST00000464045 NUDT16Q96DE0 195 aaKnown RBP10.59□□□□□ -0.71
THUMPD3-208ENST00000464045 USP21Q9UK80 565 aa10.59□□□□□ -0.71
THUMPD3-208ENST00000464045 EP400Q96L91 3159 aa10.59□□□□□ -0.71
THUMPD3-208ENST00000464045 ARHGEF10O15013 1369 aa10.59□□□□□ -0.71
THUMPD3-208ENST00000464045 PMFBP1Q8TBY8 1022 aa10.58□□□□□ -0.72
THUMPD3-208ENST00000464045 CCDC61Q9Y6R9 512 aa10.58□□□□□ -0.72
THUMPD3-208ENST00000464045 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
THUMPD3-208ENST00000464045 CDK12Q9NYV4 1490 aaPredicted RBP10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 POLR3AO14802 1390 aaPredicted RBP10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 SBNO2Q9Y2G9 1366 aa10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
THUMPD3-208ENST00000464045 NGDNQ8NEJ9 315 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms