RNA–Protein interactions for RNA: ENST00000463784.5

IRF1-207, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-207ENST00000463784 ROBO1Q9Y6N7 1651 aa29.25■■■□□ 2.27
IRF1-207ENST00000463784 BRINP3Q76B58 766 aa29.23■■■□□ 2.27
IRF1-207ENST00000463784 CLSPNQ9HAW4 1339 aa29.22■■■□□ 2.27
IRF1-207ENST00000463784 KIAA1210Q9ULL0 1709 aa29.21■■■□□ 2.27
IRF1-207ENST00000463784 SAFB2Q14151 953 aaKnown RBP eCLIP29.21■■■□□ 2.27
IRF1-207ENST00000463784 NBPF1Q3BBV0 1214 aa29.21■■■□□ 2.27
IRF1-207ENST00000463784 C1orf167Q5SNV9 1468 aa29.18■■■□□ 2.26
IRF1-207ENST00000463784 CDC42BPGQ6DT37 1551 aa29.18■■■□□ 2.26
IRF1-207ENST00000463784 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
IRF1-207ENST00000463784 ESCO1Q5FWF5 840 aa29.13■■■□□ 2.25
IRF1-207ENST00000463784 ORAI2Q96SN7 254 aa29.12■■■□□ 2.25
IRF1-207ENST00000463784 NUTM2FA1L443 756 aa29.11■■■□□ 2.25
IRF1-207ENST00000463784 MINK1Q8N4C8 1332 aaPredicted RBP29.11■■■□□ 2.25
IRF1-207ENST00000463784 ROCK2O75116 1388 aaKnown RBP29.11■■■□□ 2.25
IRF1-207ENST00000463784 NBPF8Q3BBV2 869 aa29.1■■■□□ 2.25
IRF1-207ENST00000463784 TIMELESSQ9UNS1 1208 aa29.1■■■□□ 2.25
IRF1-207ENST00000463784 HIRIP3Q9BW71 556 aaPredicted RBP29.08■■■□□ 2.25
IRF1-207ENST00000463784 AHDC1Q5TGY3 1603 aaPredicted RBP29.08■■■□□ 2.25
IRF1-207ENST00000463784 PHLPP1O60346 1717 aa29.08■■■□□ 2.25
IRF1-207ENST00000463784 EIF3AQ14152 1382 aaKnown RBP29.06■■■□□ 2.24
IRF1-207ENST00000463784 JCADQ9P266 1359 aa29.05■■■□□ 2.24
IRF1-207ENST00000463784 WASLO00401 505 aaPredicted RBP29.05■■■□□ 2.24
IRF1-207ENST00000463784 LRRC59Q96AG4 307 aaKnown RBP29.04■■■□□ 2.24
IRF1-207ENST00000463784 TRPM1Q7Z4N2 1603 aa29.04■■■□□ 2.24
IRF1-207ENST00000463784 CENPJQ9HC77 1338 aaPredicted RBP29.03■■■□□ 2.24
IRF1-207ENST00000463784 NPHP3Q7Z494 1330 aa29.02■■■□□ 2.24
IRF1-207ENST00000463784 ARHGEF28Q8N1W1 1705 aaKnown RBP29.02■■■□□ 2.24
IRF1-207ENST00000463784 ADGRB2O60241 1585 aa29.01■■■□□ 2.24
IRF1-207ENST00000463784 FMN2Q9NZ56 1722 aa29.01■■■□□ 2.23
IRF1-207ENST00000463784 DDX17Q92841 729 aaKnown RBP29.01■■■□□ 2.23
IRF1-207ENST00000463784 CARD11Q9BXL7 1154 aa29.01■■■□□ 2.23
IRF1-207ENST00000463784 COL16A1Q07092 1604 aaPredicted RBP29■■■□□ 2.23
IRF1-207ENST00000463784 ANKARQ7Z5J8 1434 aa29■■■□□ 2.23
IRF1-207ENST00000463784 GPRASP1Q5JY77 1395 aa29■■■□□ 2.23
IRF1-207ENST00000463784 FOXO3O43524 673 aa28.98■■■□□ 2.23
IRF1-207ENST00000463784 PHF8Q9UPP1 1060 aa28.98■■■□□ 2.23
IRF1-207ENST00000463784 SOS2Q07890 1332 aaPredicted RBP28.97■■■□□ 2.23
IRF1-207ENST00000463784 NHSL1Q5SYE7 1610 aa28.97■■■□□ 2.23
IRF1-207ENST00000463784 DISP3Q9P2K9 1392 aa28.97■■■□□ 2.23
IRF1-207ENST00000463784 RALGAPBQ86X10 1494 aa28.96■■■□□ 2.23
IRF1-207ENST00000463784 CDK19Q9BWU1 502 aa28.95■■■□□ 2.22
IRF1-207ENST00000463784 SPATA31A6Q5VVP1 1343 aa28.94■■■□□ 2.22
IRF1-207ENST00000463784 TULP4Q9NRJ4 1543 aa28.92■■■□□ 2.22
IRF1-207ENST00000463784 PSME1Q06323 249 aa28.9■■■□□ 2.22
IRF1-207ENST00000463784 MED1Q15648 1581 aaPredicted RBP28.9■■■□□ 2.22
IRF1-207ENST00000463784 NUDT16Q96DE0 195 aaKnown RBP28.9■■■□□ 2.22
IRF1-207ENST00000463784 PHF23Q9BUL5 403 aaPredicted RBP28.9■■■□□ 2.22
IRF1-207ENST00000463784 KIF1AQ12756 1690 aa28.89■■■□□ 2.22
IRF1-207ENST00000463784 SRPK2P78362 688 aaKnown RBP28.89■■■□□ 2.22
IRF1-207ENST00000463784 PMFBP1Q8TBY8 1022 aa28.89■■■□□ 2.22
IRF1-207ENST00000463784 PRR36Q9H6K5 1346 aa28.89■■■□□ 2.21
IRF1-207ENST00000463784 XPCQ01831 940 aaPredicted RBP28.88■■■□□ 2.21
IRF1-207ENST00000463784 KRT28Q7Z3Y7 464 aa28.88■■■□□ 2.21
IRF1-207ENST00000463784 EVC2Q86UK5 1308 aa28.87■■■□□ 2.21
IRF1-207ENST00000463784 CCDC61Q9Y6R9 512 aa28.86■■■□□ 2.21
IRF1-207ENST00000463784 NGDNQ8NEJ9 315 aaKnown RBP28.84■■■□□ 2.21
IRF1-207ENST00000463784 PNPLA6Q8IY17 1366 aa28.84■■■□□ 2.21
IRF1-207ENST00000463784 PXDNQ92626 1479 aa28.84■■■□□ 2.21
IRF1-207ENST00000463784 USP32Q8NFA0 1604 aa28.83■■■□□ 2.21
IRF1-207ENST00000463784 SHPRHQ149N8 1683 aa28.83■■■□□ 2.21
IRF1-207ENST00000463784 NUTM2BA6NNL0 878 aaPredicted RBP28.82■■■□□ 2.2
IRF1-207ENST00000463784 NUTM2EB1AL46 878 aaPredicted RBP28.82■■■□□ 2.2
IRF1-207ENST00000463784 MEX3CQ5U5Q3 659 aaKnown RBP28.82■■■□□ 2.2
IRF1-207ENST00000463784 NUTM2AQ8IVF1 878 aaPredicted RBP28.82■■■□□ 2.2
IRF1-207ENST00000463784 QRICH2Q9H0J4 1663 aa28.82■■■□□ 2.2
IRF1-207ENST00000463784 CABP2Q9NPB3 220 aa28.81■■■□□ 2.2
IRF1-207ENST00000463784 RGPD8O14715 1765 aaPredicted RBP28.8■■■□□ 2.2
IRF1-207ENST00000463784 ATP7BP35670 1465 aa28.8■■■□□ 2.2
IRF1-207ENST00000463784 SPATA31A3Q5VYP0 1347 aa28.79■■■□□ 2.2
IRF1-207ENST00000463784 SLC24A1O60721 1099 aa28.79■■■□□ 2.2
IRF1-207ENST00000463784 SBNO2Q9Y2G9 1366 aa28.78■■■□□ 2.2
IRF1-207ENST00000463784 PLEKHG3A1L390 1219 aa28.77■■■□□ 2.2
IRF1-207ENST00000463784 SBNO1A3KN83 1393 aa28.76■■■□□ 2.2
IRF1-207ENST00000463784 ST20-MTHFSA0A0A6YYL1 179 aa28.73■■■□□ 2.19
IRF1-207ENST00000463784 ITSN1Q15811 1721 aa28.73■■■□□ 2.19
IRF1-207ENST00000463784 LMOD2Q6P5Q4 547 aa28.73■■■□□ 2.19
IRF1-207ENST00000463784 ACEP12821 1306 aa28.72■■■□□ 2.19
IRF1-207ENST00000463784 TNS3Q68CZ2 1445 aa28.72■■■□□ 2.19
IRF1-207ENST00000463784 LRP6O75581 1613 aa28.72■■■□□ 2.19
IRF1-207ENST00000463784 PPIP5K1Q6PFW1 1433 aa28.71■■■□□ 2.19
IRF1-207ENST00000463784 ARHGEF10O15013 1369 aa28.71■■■□□ 2.19
IRF1-207ENST00000463784 CABP1Q9NZU7 370 aa28.7■■■□□ 2.18
IRF1-207ENST00000463784 POLR3AO14802 1390 aaPredicted RBP28.7■■■□□ 2.18
IRF1-207ENST00000463784 PAK3O75914 559 aaPredicted RBP28.69■■■□□ 2.18
IRF1-207ENST00000463784 ATAD2Q6PL18 1390 aa28.69■■■□□ 2.18
IRF1-207ENST00000463784 USP47Q96K76 1375 aa28.69■■■□□ 2.18
IRF1-207ENST00000463784 ADAMTS2O95450 1211 aa28.67■■■□□ 2.18
IRF1-207ENST00000463784 HAP1P54257 671 aaPredicted RBP28.66■■■□□ 2.18
IRF1-207ENST00000463784 COL22A1Q8NFW1 1626 aaPredicted RBP28.65■■■□□ 2.18
IRF1-207ENST00000463784 PUS7Q96PZ0 661 aaKnown RBP28.65■■■□□ 2.18
IRF1-207ENST00000463784 TOPAZ1Q8N9V7 1692 aa28.64■■■□□ 2.18
IRF1-207ENST00000463784 ZNF772Q68DY9 489 aaPredicted RBP28.64■■■□□ 2.18
IRF1-207ENST00000463784 TESK2Q96S53 571 aa28.64■■■□□ 2.18
IRF1-207ENST00000463784 RGS17Q9UGC6 210 aaPredicted RBP28.64■■■□□ 2.18
IRF1-207ENST00000463784 C8orf37Q96NL8 207 aa28.63■■■□□ 2.17
IRF1-207ENST00000463784 NGLY1Q96IV0 654 aa28.62■■■□□ 2.17
IRF1-207ENST00000463784 ZNF692Q9BU19 519 aaPredicted RBP28.62■■■□□ 2.17
IRF1-207ENST00000463784 BRD4O60885 1362 aaPredicted RBP28.61■■■□□ 2.17
IRF1-207ENST00000463784 TMF1P82094 1093 aa28.6■■■□□ 2.17
IRF1-207ENST00000463784 PLEKHG5O94827 1062 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms