RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 TMEM132EQ6IEE7 984 aa30.3■■■□□ 2.44
PDLIM4-205ENST00000463615 SOS2Q07890 1332 aaPredicted RBP30.29■■■□□ 2.44
PDLIM4-205ENST00000463615 ORAI2Q96SN7 254 aa30.28■■■□□ 2.44
PDLIM4-205ENST00000463615 PNPLA6Q8IY17 1366 aa30.28■■■□□ 2.44
PDLIM4-205ENST00000463615 DDX17Q92841 729 aaKnown RBP30.27■■■□□ 2.44
PDLIM4-205ENST00000463615 STK26Q9P289 416 aa30.27■■■□□ 2.44
PDLIM4-205ENST00000463615 WAPLQ7Z5K2 1190 aa30.26■■■□□ 2.43
PDLIM4-205ENST00000463615 MEX3CQ5U5Q3 659 aaKnown RBP30.25■■■□□ 2.43
PDLIM4-205ENST00000463615 ZNF772Q68DY9 489 aaPredicted RBP30.25■■■□□ 2.43
PDLIM4-205ENST00000463615 PLEKHH1Q9ULM0 1364 aa30.23■■■□□ 2.43
PDLIM4-205ENST00000463615 CFAP70Q5T0N1 1121 aa30.22■■■□□ 2.43
PDLIM4-205ENST00000463615 STAC3Q96MF2 364 aa30.22■■■□□ 2.43
PDLIM4-205ENST00000463615 DHX57Q6P158 1386 aaKnown RBP30.22■■■□□ 2.43
PDLIM4-205ENST00000463615 NUTM2BA6NNL0 878 aaPredicted RBP30.18■■■□□ 2.42
PDLIM4-205ENST00000463615 NUTM2EB1AL46 878 aaPredicted RBP30.18■■■□□ 2.42
PDLIM4-205ENST00000463615 NUTM2AQ8IVF1 878 aaPredicted RBP30.18■■■□□ 2.42
PDLIM4-205ENST00000463615 NPHP3Q7Z494 1330 aa30.18■■■□□ 2.42
PDLIM4-205ENST00000463615 DLC1Q96QB1 1528 aa30.17■■■□□ 2.42
PDLIM4-205ENST00000463615 ESCO1Q5FWF5 840 aa30.16■■■□□ 2.42
PDLIM4-205ENST00000463615 FMN2Q9NZ56 1722 aa30.16■■■□□ 2.42
PDLIM4-205ENST00000463615 ADGRB1O14514 1584 aa30.15■■■□□ 2.42
PDLIM4-205ENST00000463615 PXDNQ92626 1479 aa30.14■■■□□ 2.42
PDLIM4-205ENST00000463615 COL22A1Q8NFW1 1626 aaPredicted RBP30.13■■■□□ 2.41
PDLIM4-205ENST00000463615 AFF2P51816 1311 aa30.1■■■□□ 2.41
PDLIM4-205ENST00000463615 DCAF11Q8TEB1 546 aa30.09■■■□□ 2.41
PDLIM4-205ENST00000463615 KIF1AQ12756 1690 aa30.07■■■□□ 2.41
PDLIM4-205ENST00000463615 CDK12Q9NYV4 1490 aaPredicted RBP30.07■■■□□ 2.4
PDLIM4-205ENST00000463615 FOXO3O43524 673 aa30.07■■■□□ 2.4
PDLIM4-205ENST00000463615 PRAM1Q96QH2 718 aa30.07■■■□□ 2.4
PDLIM4-205ENST00000463615 ADGRB2O60241 1585 aa30.04■■■□□ 2.4
PDLIM4-205ENST00000463615 NUTM2FA1L443 756 aa30.04■■■□□ 2.4
PDLIM4-205ENST00000463615 RXRBP28702 533 aa30.04■■■□□ 2.4
PDLIM4-205ENST00000463615 C8orf37Q96NL8 207 aa30.03■■■□□ 2.4
PDLIM4-205ENST00000463615 KDM2AQ9Y2K7 1162 aa30.03■■■□□ 2.4
PDLIM4-205ENST00000463615 ANKARQ7Z5J8 1434 aa30■■■□□ 2.39
PDLIM4-205ENST00000463615 POGKQ9P215 609 aa30■■■□□ 2.39
PDLIM4-205ENST00000463615 ADAMTS2O95450 1211 aa29.99■■■□□ 2.39
PDLIM4-205ENST00000463615 FNBP4Q8N3X1 1017 aaPredicted RBP29.98■■■□□ 2.39
PDLIM4-205ENST00000463615 NGLY1Q96IV0 654 aa29.98■■■□□ 2.39
PDLIM4-205ENST00000463615 SPATA31A3Q5VYP0 1347 aa29.97■■■□□ 2.39
PDLIM4-205ENST00000463615 XPCQ01831 940 aaPredicted RBP29.97■■■□□ 2.39
PDLIM4-205ENST00000463615 PHF8Q9UPP1 1060 aa29.97■■■□□ 2.39
PDLIM4-205ENST00000463615 QTRT2Q9H974 415 aaKnown RBP29.96■■■□□ 2.39
PDLIM4-205ENST00000463615 TRAK1Q9UPV9 953 aa29.96■■■□□ 2.39
PDLIM4-205ENST00000463615 RBM6P78332 1123 aaKnown RBP29.95■■■□□ 2.39
PDLIM4-205ENST00000463615 SAFB2Q14151 953 aaKnown RBP eCLIP29.95■■■□□ 2.39
PDLIM4-205ENST00000463615 RGPD8O14715 1765 aaPredicted RBP29.95■■■□□ 2.38
PDLIM4-205ENST00000463615 USP32Q8NFA0 1604 aa29.93■■■□□ 2.38
PDLIM4-205ENST00000463615 KRT28Q7Z3Y7 464 aa29.93■■■□□ 2.38
PDLIM4-205ENST00000463615 EIF3AQ14152 1382 aaKnown RBP29.92■■■□□ 2.38
PDLIM4-205ENST00000463615 KIAA1210Q9ULL0 1709 aa29.91■■■□□ 2.38
PDLIM4-205ENST00000463615 SBNO1A3KN83 1393 aa29.9■■■□□ 2.38
PDLIM4-205ENST00000463615 PSME1Q06323 249 aa29.9■■■□□ 2.38
PDLIM4-205ENST00000463615 MARF1Q9Y4F3 1742 aaKnown RBP29.89■■■□□ 2.38
PDLIM4-205ENST00000463615 USP21Q9UK80 565 aa29.89■■■□□ 2.38
PDLIM4-205ENST00000463615 TNS3Q68CZ2 1445 aa29.88■■■□□ 2.37
PDLIM4-205ENST00000463615 TULP4Q9NRJ4 1543 aa29.87■■■□□ 2.37
PDLIM4-205ENST00000463615 TRPC5Q9UL62 973 aaPredicted RBP29.87■■■□□ 2.37
PDLIM4-205ENST00000463615 ARHGEF28Q8N1W1 1705 aaKnown RBP29.87■■■□□ 2.37
PDLIM4-205ENST00000463615 RGS12O14924 1447 aa29.87■■■□□ 2.37
PDLIM4-205ENST00000463615 WASLO00401 505 aaPredicted RBP29.86■■■□□ 2.37
PDLIM4-205ENST00000463615 ATRNO75882 1429 aa29.86■■■□□ 2.37
PDLIM4-205ENST00000463615 MINK1Q8N4C8 1332 aaPredicted RBP29.85■■■□□ 2.37
PDLIM4-205ENST00000463615 BCL9LQ86UU0 1499 aa29.85■■■□□ 2.37
PDLIM4-205ENST00000463615 HIRIP3Q9BW71 556 aaPredicted RBP29.84■■■□□ 2.37
PDLIM4-205ENST00000463615 PRR36Q9H6K5 1346 aa29.83■■■□□ 2.37
PDLIM4-205ENST00000463615 UPF1Q92900 1129 aaKnown RBP eCLIP29.83■■■□□ 2.37
PDLIM4-205ENST00000463615 ARHGEF10O15013 1369 aa29.82■■■□□ 2.36
PDLIM4-205ENST00000463615 SLIT2O94813 1529 aa29.8■■■□□ 2.36
PDLIM4-205ENST00000463615 PMFBP1Q8TBY8 1022 aa29.79■■■□□ 2.36
PDLIM4-205ENST00000463615 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.77■■■□□ 2.36
PDLIM4-205ENST00000463615 TRPM3Q9HCF6 1732 aaPredicted RBP29.77■■■□□ 2.36
PDLIM4-205ENST00000463615 ATP7BP35670 1465 aa29.75■■■□□ 2.35
PDLIM4-205ENST00000463615 GPRASP1Q5JY77 1395 aa29.74■■■□□ 2.35
PDLIM4-205ENST00000463615 NBPF1Q3BBV0 1214 aa29.73■■■□□ 2.35
PDLIM4-205ENST00000463615 ABCA3Q99758 1704 aa29.72■■■□□ 2.35
PDLIM4-205ENST00000463615 UNC5CLQ8IV45 518 aa29.72■■■□□ 2.35
PDLIM4-205ENST00000463615 ALS2Q96Q42 1657 aa29.72■■■□□ 2.35
PDLIM4-205ENST00000463615 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
PDLIM4-205ENST00000463615 L3MBTL2Q969R5 705 aa29.7■■■□□ 2.35
PDLIM4-205ENST00000463615 NUDT16Q96DE0 195 aaKnown RBP29.7■■■□□ 2.35
PDLIM4-205ENST00000463615 CABLES1Q8TDN4 633 aa29.69■■■□□ 2.34
PDLIM4-205ENST00000463615 GJD4Q96KN9 370 aaPredicted RBP29.69■■■□□ 2.34
PDLIM4-205ENST00000463615 CDK19Q9BWU1 502 aa29.68■■■□□ 2.34
PDLIM4-205ENST00000463615 NGDNQ8NEJ9 315 aaKnown RBP29.67■■■□□ 2.34
PDLIM4-205ENST00000463615 NWD2Q9ULI1 1742 aa29.66■■■□□ 2.34
PDLIM4-205ENST00000463615 HAP1P54257 671 aaPredicted RBP29.66■■■□□ 2.34
PDLIM4-205ENST00000463615 LMOD2Q6P5Q4 547 aa29.66■■■□□ 2.34
PDLIM4-205ENST00000463615 POLR3AO14802 1390 aaPredicted RBP29.64■■■□□ 2.34
PDLIM4-205ENST00000463615 ATAD2Q6PL18 1390 aa29.64■■■□□ 2.34
PDLIM4-205ENST00000463615 TOPAZ1Q8N9V7 1692 aa29.64■■■□□ 2.34
PDLIM4-205ENST00000463615 SIN3AQ96ST3 1273 aa29.64■■■□□ 2.34
PDLIM4-205ENST00000463615 CCDC61Q9Y6R9 512 aa29.64■■■□□ 2.34
PDLIM4-205ENST00000463615 RALGAPBQ86X10 1494 aa29.63■■■□□ 2.33
PDLIM4-205ENST00000463615 GLI3P10071 1580 aa29.62■■■□□ 2.33
PDLIM4-205ENST00000463615 PLEKHG3A1L390 1219 aa29.62■■■□□ 2.33
PDLIM4-205ENST00000463615 CENPJQ9HC77 1338 aaPredicted RBP29.62■■■□□ 2.33
PDLIM4-205ENST00000463615 PLCH1Q4KWH8 1693 aa29.61■■■□□ 2.33
PDLIM4-205ENST00000463615 VPS72Q15906 364 aa29.61■■■□□ 2.33
PDLIM4-205ENST00000463615 CRYBG1Q9Y4K1 1723 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms