RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 ROBO1Q9Y6N7 1651 aa14.3□□□□□ -0.12
GPATCH4-204ENST00000463513 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
GPATCH4-204ENST00000463513 CADPS2Q86UW7 1296 aa14.29□□□□□ -0.12
GPATCH4-204ENST00000463513 PRAM1Q96QH2 718 aa14.29□□□□□ -0.12
GPATCH4-204ENST00000463513 EIF3AQ14152 1382 aaKnown RBP14.28□□□□□ -0.12
GPATCH4-204ENST00000463513 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
GPATCH4-204ENST00000463513 PLEKHH1Q9ULM0 1364 aa14.28□□□□□ -0.12
GPATCH4-204ENST00000463513 FMN2Q9NZ56 1722 aa14.27□□□□□ -0.12
GPATCH4-204ENST00000463513 NBPF1Q3BBV0 1214 aa14.27□□□□□ -0.13
GPATCH4-204ENST00000463513 TIMELESSQ9UNS1 1208 aa14.27□□□□□ -0.13
GPATCH4-204ENST00000463513 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
GPATCH4-204ENST00000463513 NBPF8Q3BBV2 869 aa14.25□□□□□ -0.13
GPATCH4-204ENST00000463513 SIRT1Q96EB6 747 aa14.25□□□□□ -0.13
GPATCH4-204ENST00000463513 ILDR1Q86SU0 546 aaPredicted RBP14.24□□□□□ -0.13
GPATCH4-204ENST00000463513 CARD11Q9BXL7 1154 aa14.24□□□□□ -0.13
GPATCH4-204ENST00000463513 MINK1Q8N4C8 1332 aaPredicted RBP14.23□□□□□ -0.13
GPATCH4-204ENST00000463513 SLAIN2Q9P270 581 aa14.23□□□□□ -0.13
GPATCH4-204ENST00000463513 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
GPATCH4-204ENST00000463513 ITSN1Q15811 1721 aa14.23□□□□□ -0.13
GPATCH4-204ENST00000463513 MST1RQ04912 1400 aa14.23□□□□□ -0.13
GPATCH4-204ENST00000463513 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
GPATCH4-204ENST00000463513 RGPD8O14715 1765 aaPredicted RBP14.22□□□□□ -0.13
GPATCH4-204ENST00000463513 CENPJQ9HC77 1338 aaPredicted RBP14.22□□□□□ -0.13
GPATCH4-204ENST00000463513 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
GPATCH4-204ENST00000463513 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
GPATCH4-204ENST00000463513 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
GPATCH4-204ENST00000463513 NUTM2FA1L443 756 aa14.19□□□□□ -0.14
GPATCH4-204ENST00000463513 TULP4Q9NRJ4 1543 aa14.19□□□□□ -0.14
GPATCH4-204ENST00000463513 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
GPATCH4-204ENST00000463513 AHDC1Q5TGY3 1603 aaPredicted RBP14.17□□□□□ -0.14
GPATCH4-204ENST00000463513 ANKARQ7Z5J8 1434 aa14.16□□□□□ -0.14
GPATCH4-204ENST00000463513 USP32Q8NFA0 1604 aa14.16□□□□□ -0.14
GPATCH4-204ENST00000463513 USP47Q96K76 1375 aa14.15□□□□□ -0.14
GPATCH4-204ENST00000463513 HSPA1LP34931 641 aa14.15□□□□□ -0.14
GPATCH4-204ENST00000463513 ESCO1Q5FWF5 840 aa14.15□□□□□ -0.14
GPATCH4-204ENST00000463513 BRINP3Q76B58 766 aa14.15□□□□□ -0.14
GPATCH4-204ENST00000463513 TOPAZ1Q8N9V7 1692 aa14.14□□□□□ -0.15
GPATCH4-204ENST00000463513 WASLO00401 505 aaPredicted RBP14.14□□□□□ -0.15
GPATCH4-204ENST00000463513 COL16A1Q07092 1604 aaPredicted RBP14.14□□□□□ -0.15
GPATCH4-204ENST00000463513 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
GPATCH4-204ENST00000463513 EVC2Q86UK5 1308 aa14.13□□□□□ -0.15
GPATCH4-204ENST00000463513 ATP7BP35670 1465 aa14.12□□□□□ -0.15
GPATCH4-204ENST00000463513 ORAI2Q96SN7 254 aa14.12□□□□□ -0.15
GPATCH4-204ENST00000463513 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
GPATCH4-204ENST00000463513 NPHP3Q7Z494 1330 aa14.11□□□□□ -0.15
GPATCH4-204ENST00000463513 SBNO2Q9Y2G9 1366 aa14.1□□□□□ -0.15
GPATCH4-204ENST00000463513 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
GPATCH4-204ENST00000463513 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
GPATCH4-204ENST00000463513 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
GPATCH4-204ENST00000463513 NUDT16Q96DE0 195 aaKnown RBP14.08□□□□□ -0.16
GPATCH4-204ENST00000463513 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
GPATCH4-204ENST00000463513 DDX17Q92841 729 aaKnown RBP14.07□□□□□ -0.16
GPATCH4-204ENST00000463513 CABP2Q9NPB3 220 aa14.07□□□□□ -0.16
GPATCH4-204ENST00000463513 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
GPATCH4-204ENST00000463513 PPIP5K1Q6PFW1 1433 aa14.07□□□□□ -0.16
GPATCH4-204ENST00000463513 FOXO3O43524 673 aa14.06□□□□□ -0.16
GPATCH4-204ENST00000463513 SLC24A1O60721 1099 aa14.06□□□□□ -0.16
GPATCH4-204ENST00000463513 NGDNQ8NEJ9 315 aaKnown RBP14.06□□□□□ -0.16
GPATCH4-204ENST00000463513 ATAD2Q6PL18 1390 aa14.06□□□□□ -0.16
GPATCH4-204ENST00000463513 JCADQ9P266 1359 aa14.06□□□□□ -0.16
GPATCH4-204ENST00000463513 PXDNQ92626 1479 aa14.06□□□□□ -0.16
GPATCH4-204ENST00000463513 EIF4G2P78344 907 aaKnown RBP eCLIP14.05□□□□□ -0.16
GPATCH4-204ENST00000463513 XPCQ01831 940 aaPredicted RBP14.05□□□□□ -0.16
GPATCH4-204ENST00000463513 PSME1Q06323 249 aa14.04□□□□□ -0.16
GPATCH4-204ENST00000463513 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
GPATCH4-204ENST00000463513 TRPM3Q9HCF6 1732 aaPredicted RBP14.04□□□□□ -0.16
GPATCH4-204ENST00000463513 AKAP12Q02952 1782 aa14.04□□□□□ -0.16
GPATCH4-204ENST00000463513 TMF1P82094 1093 aa14.03□□□□□ -0.16
GPATCH4-204ENST00000463513 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
GPATCH4-204ENST00000463513 MED1Q15648 1581 aaPredicted RBP14.02□□□□□ -0.16
GPATCH4-204ENST00000463513 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
GPATCH4-204ENST00000463513 COL22A1Q8NFW1 1626 aaPredicted RBP14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 TNS3Q68CZ2 1445 aa14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 KRT28Q7Z3Y7 464 aa14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 TESK2Q96S53 571 aa14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 MON2Q7Z3U7 1717 aa14.01□□□□□ -0.17
GPATCH4-204ENST00000463513 DISP3Q9P2K9 1392 aa14□□□□□ -0.17
GPATCH4-204ENST00000463513 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
GPATCH4-204ENST00000463513 HSPA5P11021 654 aaKnown RBP14□□□□□ -0.17
GPATCH4-204ENST00000463513 TMC1Q8TDI8 760 aa14□□□□□ -0.17
GPATCH4-204ENST00000463513 ALS2Q96Q42 1657 aa14□□□□□ -0.17
GPATCH4-204ENST00000463513 POLR3AO14802 1390 aaPredicted RBP13.99□□□□□ -0.17
GPATCH4-204ENST00000463513 PNPLA6Q8IY17 1366 aa13.99□□□□□ -0.17
GPATCH4-204ENST00000463513 ACEP12821 1306 aa13.99□□□□□ -0.17
GPATCH4-204ENST00000463513 ABCA3Q99758 1704 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 SBNO1A3KN83 1393 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 NINLQ9Y2I6 1382 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 SPATA31A6Q5VVP1 1343 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 PLEKHG3A1L390 1219 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 MEX3CQ5U5Q3 659 aaKnown RBP13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 POLR3GLQ9BT43 218 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 CABP1Q9NZU7 370 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 MYOM1P52179 1685 aa13.98□□□□□ -0.17
GPATCH4-204ENST00000463513 NUTM2BA6NNL0 878 aaPredicted RBP13.97□□□□□ -0.17
GPATCH4-204ENST00000463513 NUTM2EB1AL46 878 aaPredicted RBP13.97□□□□□ -0.17
GPATCH4-204ENST00000463513 HAP1P54257 671 aaPredicted RBP13.97□□□□□ -0.17
GPATCH4-204ENST00000463513 NUTM2AQ8IVF1 878 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms