RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 KNDC1Q76NI1 1749 aa34.73■■■■□ 3.15
SSNA1-203ENST00000463511 NGLY1Q96IV0 654 aa34.73■■■■□ 3.15
SSNA1-203ENST00000463511 ADGRF5Q8IZF2 1346 aa34.73■■■■□ 3.15
SSNA1-203ENST00000463511 RBM6P78332 1123 aaKnown RBP34.72■■■■□ 3.15
SSNA1-203ENST00000463511 SPATA31E1Q6ZUB1 1445 aa34.71■■■■□ 3.15
SSNA1-203ENST00000463511 MARF1Q9Y4F3 1742 aaKnown RBP34.7■■■■□ 3.15
SSNA1-203ENST00000463511 RGL3Q3MIN7 710 aa34.69■■■■□ 3.14
SSNA1-203ENST00000463511 PXDNQ92626 1479 aa34.66■■■■□ 3.14
SSNA1-203ENST00000463511 TECPR2O15040 1411 aa34.66■■■■□ 3.14
SSNA1-203ENST00000463511 ESCO1Q5FWF5 840 aa34.65■■■■□ 3.14
SSNA1-203ENST00000463511 ANKRD30BQ9BXX2 1392 aa34.64■■■■□ 3.14
SSNA1-203ENST00000463511 STK26Q9P289 416 aa34.64■■■■□ 3.14
SSNA1-203ENST00000463511 FMN2Q9NZ56 1722 aa34.64■■■■□ 3.14
SSNA1-203ENST00000463511 NPHP3Q7Z494 1330 aa34.63■■■■□ 3.13
SSNA1-203ENST00000463511 MPHOSPH9Q99550 1183 aa34.62■■■■□ 3.13
SSNA1-203ENST00000463511 MYOM2P54296 1465 aa34.62■■■■□ 3.13
SSNA1-203ENST00000463511 LRPPRCP42704 1394 aaKnown RBP34.62■■■■□ 3.13
SSNA1-203ENST00000463511 WAPLQ7Z5K2 1190 aa34.61■■■■□ 3.13
SSNA1-203ENST00000463511 USP21Q9UK80 565 aa34.61■■■■□ 3.13
SSNA1-203ENST00000463511 PIK3C2GO75747 1445 aa34.61■■■■□ 3.13
SSNA1-203ENST00000463511 TMEM132EQ6IEE7 984 aa34.58■■■■□ 3.13
SSNA1-203ENST00000463511 PLEKHH1Q9ULM0 1364 aa34.58■■■■□ 3.13
SSNA1-203ENST00000463511 NUTM2FA1L443 756 aa34.57■■■■□ 3.12
SSNA1-203ENST00000463511 XPCQ01831 940 aaPredicted RBP34.57■■■■□ 3.12
SSNA1-203ENST00000463511 KIF1AQ12756 1690 aa34.57■■■■□ 3.12
SSNA1-203ENST00000463511 RGPD8O14715 1765 aaPredicted RBP34.57■■■■□ 3.12
SSNA1-203ENST00000463511 FOXO3O43524 673 aa34.56■■■■□ 3.12
SSNA1-203ENST00000463511 ABCC11Q96J66 1382 aa34.56■■■■□ 3.12
SSNA1-203ENST00000463511 FNBP4Q8N3X1 1017 aaPredicted RBP34.55■■■■□ 3.12
SSNA1-203ENST00000463511 TRPC5Q9UL62 973 aaPredicted RBP34.54■■■■□ 3.12
SSNA1-203ENST00000463511 ATRNO75882 1429 aa34.54■■■■□ 3.12
SSNA1-203ENST00000463511 YTHDC2Q9H6S0 1430 aaKnown RBP34.53■■■■□ 3.12
SSNA1-203ENST00000463511 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.49■■■■□ 3.11
SSNA1-203ENST00000463511 ATAD2Q6PL18 1390 aa34.49■■■■□ 3.11
SSNA1-203ENST00000463511 BCL9LQ86UU0 1499 aa34.47■■■■□ 3.11
SSNA1-203ENST00000463511 EP400Q96L91 3159 aa34.45■■■■□ 3.11
SSNA1-203ENST00000463511 NRXN1Q9ULB1 1477 aa34.44■■■■□ 3.1
SSNA1-203ENST00000463511 USP32Q8NFA0 1604 aa34.41■■■■□ 3.1
SSNA1-203ENST00000463511 C14orf93Q9H972 538 aaKnown RBP34.39■■■■□ 3.1
SSNA1-203ENST00000463511 SPATA31A3Q5VYP0 1347 aa34.38■■■■□ 3.09
SSNA1-203ENST00000463511 ABCA3Q99758 1704 aa34.37■■■■□ 3.09
SSNA1-203ENST00000463511 CFAP70Q5T0N1 1121 aa34.36■■■■□ 3.09
SSNA1-203ENST00000463511 SIRT1Q96EB6 747 aa34.35■■■■□ 3.09
SSNA1-203ENST00000463511 DHX57Q6P158 1386 aaKnown RBP34.35■■■■□ 3.09
SSNA1-203ENST00000463511 ACIN1Q9UKV3 1341 aaKnown RBP34.33■■■■□ 3.09
SSNA1-203ENST00000463511 GLI3P10071 1580 aa34.33■■■■□ 3.09
SSNA1-203ENST00000463511 KRT28Q7Z3Y7 464 aa34.33■■■■□ 3.09
SSNA1-203ENST00000463511 SLIT2O94813 1529 aa34.33■■■■□ 3.09
SSNA1-203ENST00000463511 BRWD3Q6RI45 1802 aa34.32■■■■□ 3.09
SSNA1-203ENST00000463511 PLCH1Q4KWH8 1693 aa34.32■■■■□ 3.08
SSNA1-203ENST00000463511 TNS3Q68CZ2 1445 aa34.32■■■■□ 3.08
SSNA1-203ENST00000463511 GJD4Q96KN9 370 aaPredicted RBP34.32■■■■□ 3.08
SSNA1-203ENST00000463511 SAFB2Q14151 953 aaKnown RBP eCLIP34.3■■■■□ 3.08
SSNA1-203ENST00000463511 PHF8Q9UPP1 1060 aa34.3■■■■□ 3.08
SSNA1-203ENST00000463511 RALGAPBQ86X10 1494 aa34.29■■■■□ 3.08
SSNA1-203ENST00000463511 PRAM1Q96QH2 718 aa34.29■■■■□ 3.08
SSNA1-203ENST00000463511 DLC1Q96QB1 1528 aa34.29■■■■□ 3.08
SSNA1-203ENST00000463511 ADGRB2O60241 1585 aa34.28■■■■□ 3.08
SSNA1-203ENST00000463511 NWD2Q9ULI1 1742 aa34.27■■■■□ 3.08
SSNA1-203ENST00000463511 RAB3GAP2Q9H2M9 1393 aa34.27■■■■□ 3.08
SSNA1-203ENST00000463511 UNC5CLQ8IV45 518 aa34.27■■■■□ 3.08
SSNA1-203ENST00000463511 ADGRB1O14514 1584 aa34.24■■■■□ 3.07
SSNA1-203ENST00000463511 SRCAPQ6ZRS2 3230 aa34.23■■■■□ 3.07
SSNA1-203ENST00000463511 PLEKHG5O94827 1062 aa34.23■■■■□ 3.07
SSNA1-203ENST00000463511 HAP1P54257 671 aaPredicted RBP34.23■■■■□ 3.07
SSNA1-203ENST00000463511 PSME1Q06323 249 aa34.23■■■■□ 3.07
SSNA1-203ENST00000463511 CABLES1Q8TDN4 633 aa34.22■■■■□ 3.07
SSNA1-203ENST00000463511 TRPM3Q9HCF6 1732 aaPredicted RBP34.21■■■■□ 3.07
SSNA1-203ENST00000463511 POGKQ9P215 609 aa34.21■■■■□ 3.07
SSNA1-203ENST00000463511 SBNO1A3KN83 1393 aa34.2■■■■□ 3.07
SSNA1-203ENST00000463511 ANKARQ7Z5J8 1434 aa34.2■■■■□ 3.06
SSNA1-203ENST00000463511 LMOD2Q6P5Q4 547 aa34.18■■■■□ 3.06
SSNA1-203ENST00000463511 ARHGEF10O15013 1369 aa34.17■■■■□ 3.06
SSNA1-203ENST00000463511 CCDC125Q86Z20 511 aa34.16■■■■□ 3.06
SSNA1-203ENST00000463511 PMFBP1Q8TBY8 1022 aa34.16■■■■□ 3.06
SSNA1-203ENST00000463511 ALS2Q96Q42 1657 aa34.15■■■■□ 3.06
SSNA1-203ENST00000463511 NRAPQ86VF7 1730 aa34.13■■■■□ 3.05
SSNA1-203ENST00000463511 TRAK1Q9UPV9 953 aa34.13■■■■□ 3.05
SSNA1-203ENST00000463511 HIRIP3Q9BW71 556 aaPredicted RBP34.12■■■■□ 3.05
SSNA1-203ENST00000463511 ZRANB1Q9UGI0 708 aa34.12■■■■□ 3.05
SSNA1-203ENST00000463511 VPS72Q15906 364 aa34.1■■■■□ 3.05
SSNA1-203ENST00000463511 ARHGEF28Q8N1W1 1705 aaKnown RBP34.1■■■■□ 3.05
SSNA1-203ENST00000463511 TULP4Q9NRJ4 1543 aa34.09■■■■□ 3.05
SSNA1-203ENST00000463511 KDM2AQ9Y2K7 1162 aa34.09■■■■□ 3.05
SSNA1-203ENST00000463511 BLMP54132 1417 aaPredicted RBP34.09■■■■□ 3.05
SSNA1-203ENST00000463511 MINK1Q8N4C8 1332 aaPredicted RBP34.08■■■■□ 3.05
SSNA1-203ENST00000463511 CRYBG1Q9Y4K1 1723 aa34.07■■■■□ 3.05
SSNA1-203ENST00000463511 SEPT12Q8IYM1 358 aa34.07■■■■□ 3.04
SSNA1-203ENST00000463511 CCDC9Q9Y3X0 531 aaKnown RBP34.07■■■■□ 3.04
SSNA1-203ENST00000463511 ITSN1Q15811 1721 aa34.07■■■■□ 3.04
SSNA1-203ENST00000463511 DCAF11Q8TEB1 546 aa34.06■■■■□ 3.04
SSNA1-203ENST00000463511 EIF3AQ14152 1382 aaKnown RBP34.05■■■■□ 3.04
SSNA1-203ENST00000463511 COL14A1Q05707 1796 aaKnown RBP34.05■■■■□ 3.04
SSNA1-203ENST00000463511 PRR36Q9H6K5 1346 aa34.04■■■■□ 3.04
SSNA1-203ENST00000463511 GPRASP1Q5JY77 1395 aa34.02■■■■□ 3.04
SSNA1-203ENST00000463511 FAM83GA6ND36 823 aa34.02■■■■□ 3.04
SSNA1-203ENST00000463511 WASLO00401 505 aaPredicted RBP33.98■■■■□ 3.03
SSNA1-203ENST00000463511 ONECUT3O60422 494 aaPredicted RBP33.97■■■■□ 3.03
SSNA1-203ENST00000463511 DEFB132Q7Z7B7 95 aa33.96■■■■□ 3.03
SSNA1-203ENST00000463511 KRT27Q7Z3Y8 459 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms