RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 DDX17Q92841 729 aaKnown RBP32.62■■■□□ 2.81
PDLIM7-206ENST00000463411 NUTM2BA6NNL0 878 aaPredicted RBP32.61■■■□□ 2.81
PDLIM7-206ENST00000463411 NUTM2EB1AL46 878 aaPredicted RBP32.61■■■□□ 2.81
PDLIM7-206ENST00000463411 NUTM2AQ8IVF1 878 aaPredicted RBP32.61■■■□□ 2.81
PDLIM7-206ENST00000463411 HRCP23327 699 aa32.59■■■□□ 2.81
PDLIM7-206ENST00000463411 ORAI2Q96SN7 254 aa32.59■■■□□ 2.81
PDLIM7-206ENST00000463411 ZNF772Q68DY9 489 aaPredicted RBP32.58■■■□□ 2.81
PDLIM7-206ENST00000463411 PNPLA6Q8IY17 1366 aa32.58■■■□□ 2.81
PDLIM7-206ENST00000463411 WAPLQ7Z5K2 1190 aa32.57■■■□□ 2.8
PDLIM7-206ENST00000463411 C14orf93Q9H972 538 aaKnown RBP32.57■■■□□ 2.8
PDLIM7-206ENST00000463411 DHX57Q6P158 1386 aaKnown RBP32.55■■■□□ 2.8
PDLIM7-206ENST00000463411 FMN2Q9NZ56 1722 aa32.53■■■□□ 2.8
PDLIM7-206ENST00000463411 PLEKHH1Q9ULM0 1364 aa32.53■■■□□ 2.8
PDLIM7-206ENST00000463411 SOS2Q07890 1332 aaPredicted RBP32.52■■■□□ 2.8
PDLIM7-206ENST00000463411 ESCO1Q5FWF5 840 aa32.52■■■□□ 2.8
PDLIM7-206ENST00000463411 CFAP70Q5T0N1 1121 aa32.52■■■□□ 2.8
PDLIM7-206ENST00000463411 NPHP3Q7Z494 1330 aa32.5■■■□□ 2.79
PDLIM7-206ENST00000463411 SIRT1Q96EB6 747 aa32.49■■■□□ 2.79
PDLIM7-206ENST00000463411 KIF1AQ12756 1690 aa32.46■■■□□ 2.79
PDLIM7-206ENST00000463411 COL22A1Q8NFW1 1626 aaPredicted RBP32.44■■■□□ 2.78
PDLIM7-206ENST00000463411 NUTM2FA1L443 756 aa32.44■■■□□ 2.78
PDLIM7-206ENST00000463411 DLC1Q96QB1 1528 aa32.44■■■□□ 2.78
PDLIM7-206ENST00000463411 AFF2P51816 1311 aa32.44■■■□□ 2.78
PDLIM7-206ENST00000463411 PXDNQ92626 1479 aa32.42■■■□□ 2.78
PDLIM7-206ENST00000463411 C8orf37Q96NL8 207 aa32.42■■■□□ 2.78
PDLIM7-206ENST00000463411 DCAF11Q8TEB1 546 aa32.41■■■□□ 2.78
PDLIM7-206ENST00000463411 STAC3Q96MF2 364 aa32.41■■■□□ 2.78
PDLIM7-206ENST00000463411 ADGRB1O14514 1584 aa32.41■■■□□ 2.78
PDLIM7-206ENST00000463411 KDM2AQ9Y2K7 1162 aa32.4■■■□□ 2.78
PDLIM7-206ENST00000463411 PRAM1Q96QH2 718 aa32.39■■■□□ 2.78
PDLIM7-206ENST00000463411 FOXO3O43524 673 aa32.38■■■□□ 2.77
PDLIM7-206ENST00000463411 ADAMTS2O95450 1211 aa32.37■■■□□ 2.77
PDLIM7-206ENST00000463411 RXRBP28702 533 aa32.37■■■□□ 2.77
PDLIM7-206ENST00000463411 POGKQ9P215 609 aa32.37■■■□□ 2.77
PDLIM7-206ENST00000463411 RGPD8O14715 1765 aaPredicted RBP32.35■■■□□ 2.77
PDLIM7-206ENST00000463411 SAFB2Q14151 953 aaKnown RBP eCLIP32.35■■■□□ 2.77
PDLIM7-206ENST00000463411 ADGRB2O60241 1585 aa32.35■■■□□ 2.77
PDLIM7-206ENST00000463411 XPCQ01831 940 aaPredicted RBP32.34■■■□□ 2.77
PDLIM7-206ENST00000463411 NGLY1Q96IV0 654 aa32.33■■■□□ 2.77
PDLIM7-206ENST00000463411 CDK12Q9NYV4 1490 aaPredicted RBP32.33■■■□□ 2.77
PDLIM7-206ENST00000463411 TRAK1Q9UPV9 953 aa32.3■■■□□ 2.76
PDLIM7-206ENST00000463411 MARF1Q9Y4F3 1742 aaKnown RBP32.29■■■□□ 2.76
PDLIM7-206ENST00000463411 ANKARQ7Z5J8 1434 aa32.27■■■□□ 2.76
PDLIM7-206ENST00000463411 PHF8Q9UPP1 1060 aa32.26■■■□□ 2.75
PDLIM7-206ENST00000463411 EIF3AQ14152 1382 aaKnown RBP32.25■■■□□ 2.75
PDLIM7-206ENST00000463411 QTRT2Q9H974 415 aaKnown RBP32.25■■■□□ 2.75
PDLIM7-206ENST00000463411 USP32Q8NFA0 1604 aa32.24■■■□□ 2.75
PDLIM7-206ENST00000463411 ARHGEF28Q8N1W1 1705 aaKnown RBP32.23■■■□□ 2.75
PDLIM7-206ENST00000463411 RBM6P78332 1123 aaKnown RBP32.23■■■□□ 2.75
PDLIM7-206ENST00000463411 KRT28Q7Z3Y7 464 aa32.23■■■□□ 2.75
PDLIM7-206ENST00000463411 SPATA31A3Q5VYP0 1347 aa32.23■■■□□ 2.75
PDLIM7-206ENST00000463411 USP21Q9UK80 565 aa32.22■■■□□ 2.75
PDLIM7-206ENST00000463411 KIAA1210Q9ULL0 1709 aa32.22■■■□□ 2.75
PDLIM7-206ENST00000463411 PSME1Q06323 249 aa32.21■■■□□ 2.75
PDLIM7-206ENST00000463411 MINK1Q8N4C8 1332 aaPredicted RBP32.2■■■□□ 2.74
PDLIM7-206ENST00000463411 TNS3Q68CZ2 1445 aa32.19■■■□□ 2.74
PDLIM7-206ENST00000463411 HIRIP3Q9BW71 556 aaPredicted RBP32.19■■■□□ 2.74
PDLIM7-206ENST00000463411 TULP4Q9NRJ4 1543 aa32.18■■■□□ 2.74
PDLIM7-206ENST00000463411 FNBP4Q8N3X1 1017 aaPredicted RBP32.18■■■□□ 2.74
PDLIM7-206ENST00000463411 RGS12O14924 1447 aa32.17■■■□□ 2.74
PDLIM7-206ENST00000463411 TRPC5Q9UL62 973 aaPredicted RBP32.17■■■□□ 2.74
PDLIM7-206ENST00000463411 SBNO1A3KN83 1393 aa32.14■■■□□ 2.74
PDLIM7-206ENST00000463411 ITSN1Q15811 1721 aa32.12■■■□□ 2.73
PDLIM7-206ENST00000463411 WASLO00401 505 aaPredicted RBP32.12■■■□□ 2.73
PDLIM7-206ENST00000463411 PMFBP1Q8TBY8 1022 aa32.12■■■□□ 2.73
PDLIM7-206ENST00000463411 ATRNO75882 1429 aa32.11■■■□□ 2.73
PDLIM7-206ENST00000463411 ARHGEF10O15013 1369 aa32.11■■■□□ 2.73
PDLIM7-206ENST00000463411 HAP1P54257 671 aaPredicted RBP32.11■■■□□ 2.73
PDLIM7-206ENST00000463411 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.11■■■□□ 2.73
PDLIM7-206ENST00000463411 ABCA3Q99758 1704 aa32.09■■■□□ 2.73
PDLIM7-206ENST00000463411 LMOD2Q6P5Q4 547 aa32.08■■■□□ 2.73
PDLIM7-206ENST00000463411 UPF1Q92900 1129 aaKnown RBP eCLIP32.08■■■□□ 2.73
PDLIM7-206ENST00000463411 GPRASP1Q5JY77 1395 aa32.07■■■□□ 2.73
PDLIM7-206ENST00000463411 TRPM3Q9HCF6 1732 aaPredicted RBP32.07■■■□□ 2.72
PDLIM7-206ENST00000463411 BCL9LQ86UU0 1499 aa32.07■■■□□ 2.72
PDLIM7-206ENST00000463411 PRR36Q9H6K5 1346 aa32.06■■■□□ 2.72
PDLIM7-206ENST00000463411 SLIT2O94813 1529 aa32.02■■■□□ 2.72
PDLIM7-206ENST00000463411 ATP7BP35670 1465 aa32.02■■■□□ 2.72
PDLIM7-206ENST00000463411 ALS2Q96Q42 1657 aa32.02■■■□□ 2.72
PDLIM7-206ENST00000463411 PLEKHG5O94827 1062 aa32.01■■■□□ 2.71
PDLIM7-206ENST00000463411 PLCH1Q4KWH8 1693 aa32■■■□□ 2.71
PDLIM7-206ENST00000463411 NGDNQ8NEJ9 315 aaKnown RBP32■■■□□ 2.71
PDLIM7-206ENST00000463411 CABLES1Q8TDN4 633 aa32■■■□□ 2.71
PDLIM7-206ENST00000463411 NWD2Q9ULI1 1742 aa31.98■■■□□ 2.71
PDLIM7-206ENST00000463411 UNC5CLQ8IV45 518 aa31.98■■■□□ 2.71
PDLIM7-206ENST00000463411 ATAD2Q6PL18 1390 aa31.97■■■□□ 2.71
PDLIM7-206ENST00000463411 TOPAZ1Q8N9V7 1692 aa31.96■■■□□ 2.71
PDLIM7-206ENST00000463411 NBPF1Q3BBV0 1214 aa31.96■■■□□ 2.71
PDLIM7-206ENST00000463411 NUDT16Q96DE0 195 aaKnown RBP31.96■■■□□ 2.71
PDLIM7-206ENST00000463411 GJD4Q96KN9 370 aaPredicted RBP31.95■■■□□ 2.71
PDLIM7-206ENST00000463411 CDK19Q9BWU1 502 aa31.94■■■□□ 2.7
PDLIM7-206ENST00000463411 L3MBTL2Q969R5 705 aa31.92■■■□□ 2.7
PDLIM7-206ENST00000463411 QRICH2Q9H0J4 1663 aa31.92■■■□□ 2.7
PDLIM7-206ENST00000463411 PAK3O75914 559 aaPredicted RBP31.91■■■□□ 2.7
PDLIM7-206ENST00000463411 TRIM26Q12899 539 aaPredicted RBP31.91■■■□□ 2.7
PDLIM7-206ENST00000463411 RALGAPBQ86X10 1494 aa31.91■■■□□ 2.7
PDLIM7-206ENST00000463411 GLI3P10071 1580 aa31.9■■■□□ 2.7
PDLIM7-206ENST00000463411 TRPM1Q7Z4N2 1603 aa31.9■■■□□ 2.7
PDLIM7-206ENST00000463411 CENPJQ9HC77 1338 aaPredicted RBP31.9■■■□□ 2.7
PDLIM7-206ENST00000463411 SIN3AQ96ST3 1273 aa31.89■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms