RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 ATP6V1AP38606 617 aa4.6□□□□□ -1.67
TMEM56-204ENST00000463375 FUT2Q10981 343 aa4.6□□□□□ -1.67
TMEM56-204ENST00000463375 WDR70Q9NW82 654 aa4.6□□□□□ -1.67
TMEM56-204ENST00000463375 SLC27A5Q9Y2P5 690 aa4.6□□□□□ -1.67
TMEM56-204ENST00000463375 OATP04181 439 aa4.59□□□□□ -1.67
TMEM56-204ENST00000463375 VSIG8P0DPA2 414 aa4.59□□□□□ -1.67
TMEM56-204ENST00000463375 MLLT3P42568 568 aaPredicted RBP4.59□□□□□ -1.67
TMEM56-204ENST00000463375 MMP16P51512 607 aa4.59□□□□□ -1.67
TMEM56-204ENST00000463375 TRIM46Q7Z4K8 759 aa4.59□□□□□ -1.67
TMEM56-204ENST00000463375 WNT7BP56706 349 aa4.58□□□□□ -1.68
TMEM56-204ENST00000463375 METTL3Q86U44 580 aaKnown RBP4.58□□□□□ -1.68
TMEM56-204ENST00000463375 BBXQ8WY36 941 aaPredicted RBP4.58□□□□□ -1.68
TMEM56-204ENST00000463375 FCHSD2O94868 740 aa4.57□□□□□ -1.68
TMEM56-204ENST00000463375 BMP1P13497 986 aa4.57□□□□□ -1.68
TMEM56-204ENST00000463375 VEGFBP49765 207 aa4.57□□□□□ -1.68
TMEM56-204ENST00000463375 RNF19BQ6ZMZ0 732 aa4.57□□□□□ -1.68
TMEM56-204ENST00000463375 KCTD17Q8N5Z5 321 aa4.57□□□□□ -1.68
TMEM56-204ENST00000463375 FECHP22830 423 aa4.56□□□□□ -1.68
TMEM56-204ENST00000463375 SKOR1P84550 965 aa4.56□□□□□ -1.68
TMEM56-204ENST00000463375 RC3H1Q5TC82 1133 aaKnown RBP4.56□□□□□ -1.68
TMEM56-204ENST00000463375 DAXXQ9UER7 740 aaPredicted RBP4.56□□□□□ -1.68
TMEM56-204ENST00000463375 DXOO77932 396 aaKnown RBP4.55□□□□□ -1.68
TMEM56-204ENST00000463375 GCGRP47871 477 aa4.55□□□□□ -1.68
TMEM56-204ENST00000463375 RDH13Q8NBN7 331 aa4.55□□□□□ -1.68
TMEM56-204ENST00000463375 NUTM2FA1L443 756 aa4.54□□□□□ -1.68
TMEM56-204ENST00000463375 CAPN5O15484 640 aaPredicted RBP4.54□□□□□ -1.68
TMEM56-204ENST00000463375 ALDH1A1P00352 501 aa4.54□□□□□ -1.68
TMEM56-204ENST00000463375 Q3C1V9 767 aa4.54□□□□□ -1.68
TMEM56-204ENST00000463375 ARHGEF1Q92888 912 aaKnown RBP4.54□□□□□ -1.68
TMEM56-204ENST00000463375 SULF1Q8IWU6 871 aa4.53□□□□□ -1.68
TMEM56-204ENST00000463375 TMEM151AQ8N4L1 468 aa4.53□□□□□ -1.68
TMEM56-204ENST00000463375 SPRYD3Q8NCJ5 442 aa4.53□□□□□ -1.68
TMEM56-204ENST00000463375 RNF225M0QZC1 329 aaPredicted RBP4.52□□□□□ -1.69
TMEM56-204ENST00000463375 SIAH2O43255 324 aa4.52□□□□□ -1.69
TMEM56-204ENST00000463375 RASSF7Q02833 373 aa4.52□□□□□ -1.69
TMEM56-204ENST00000463375 HIC1Q14526 733 aa4.52□□□□□ -1.69
TMEM56-204ENST00000463375 GRIPAP1Q4V328 841 aa4.52□□□□□ -1.69
TMEM56-204ENST00000463375 ZFP42Q96MM3 310 aa4.52□□□□□ -1.69
TMEM56-204ENST00000463375 DDX11L8A8MPP1 907 aa4.51□□□□□ -1.69
TMEM56-204ENST00000463375 GDF11O95390 407 aa4.51□□□□□ -1.69
TMEM56-204ENST00000463375 USB1Q9BQ65 265 aaKnown RBP4.5□□□□□ -1.69
TMEM56-204ENST00000463375 XP32Q5T750 250 aa4.49□□□□□ -1.69
TMEM56-204ENST00000463375 WASF2Q9Y6W5 498 aa4.49□□□□□ -1.69
TMEM56-204ENST00000463375 IGHA1P01876 353 aa4.48□□□□□ -1.69
TMEM56-204ENST00000463375 MRPL14Q6P1L8 145 aaKnown RBP4.48□□□□□ -1.69
TMEM56-204ENST00000463375 EHBP1Q8NDI1 1231 aa4.48□□□□□ -1.69
TMEM56-204ENST00000463375 DNMT3AQ9Y6K1 912 aaPredicted RBP4.48□□□□□ -1.69
TMEM56-204ENST00000463375 CCDC24Q8N4L8 307 aa4.47□□□□□ -1.69
TMEM56-204ENST00000463375 KCNV2Q8TDN2 545 aa4.47□□□□□ -1.69
TMEM56-204ENST00000463375 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
TMEM56-204ENST00000463375 GNPATO15228 680 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 GPR37O15354 613 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 JUNDP17535 347 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 FOXK2Q01167 660 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 SCARF1Q14162 830 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 MPNDQ8N594 471 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 NLRP7Q8WX94 980 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 PHOX2BQ99453 314 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.45□□□□□ -1.7
TMEM56-204ENST00000463375 ADAMTS8Q9UP79 889 aa4.45□□□□□ -1.7
TMEM56-204ENST00000463375 SOBPA7XYQ1 873 aa4.44□□□□□ -1.7
TMEM56-204ENST00000463375 TIMP2P16035 220 aa4.44□□□□□ -1.7
TMEM56-204ENST00000463375 KRT76Q01546 638 aa4.44□□□□□ -1.7
TMEM56-204ENST00000463375 GPAT2Q6NUI2 795 aa4.44□□□□□ -1.7
TMEM56-204ENST00000463375 PURBQ96QR8 312 aaKnown RBP4.44□□□□□ -1.7
TMEM56-204ENST00000463375 PPFIA3O75145 1194 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 ADH1CP00326 375 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 CD46P15529 392 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 USP46P62068 366 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 SH3BP2P78314 561 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 NNTQ13423 1086 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 KLF16Q9BXK1 252 aaPredicted RBP4.43□□□□□ -1.7
TMEM56-204ENST00000463375 TLL2Q9Y6L7 1015 aa4.43□□□□□ -1.7
TMEM56-204ENST00000463375 KDM4AO75164 1064 aa4.42□□□□□ -1.7
TMEM56-204ENST00000463375 PTCRAQ6ISU1 281 aaPredicted RBP4.42□□□□□ -1.7
TMEM56-204ENST00000463375 NUDT12Q9BQG2 462 aa4.42□□□□□ -1.7
TMEM56-204ENST00000463375 PLEKHG3A1L390 1219 aa4.41□□□□□ -1.7
TMEM56-204ENST00000463375 HOXA2O43364 376 aa4.41□□□□□ -1.7
TMEM56-204ENST00000463375 MAN1A2O60476 641 aa4.41□□□□□ -1.7
TMEM56-204ENST00000463375 WDR4P57081 412 aaKnown RBP4.41□□□□□ -1.7
TMEM56-204ENST00000463375 KANK3Q6NY19 840 aa4.41□□□□□ -1.7
TMEM56-204ENST00000463375 VARSP26640 1264 aaKnown RBP4.4□□□□□ -1.71
TMEM56-204ENST00000463375 ZNF385CQ66K41 422 aaPredicted RBP4.4□□□□□ -1.71
TMEM56-204ENST00000463375 RETREG3Q86VR2 466 aa4.4□□□□□ -1.71
TMEM56-204ENST00000463375 HLA-CQ95604 372 aa4.4□□□□□ -1.71
TMEM56-204ENST00000463375 SEMA3EO15041 775 aa4.39□□□□□ -1.71
TMEM56-204ENST00000463375 ADAM23O75077 832 aa4.39□□□□□ -1.71
TMEM56-204ENST00000463375 CCNYL3P0C7X3 344 aa4.39□□□□□ -1.71
TMEM56-204ENST00000463375 IRS1P35568 1242 aa4.39□□□□□ -1.71
TMEM56-204ENST00000463375 PAXIP1Q6ZW49 1069 aaPredicted RBP4.39□□□□□ -1.71
TMEM56-204ENST00000463375 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
TMEM56-204ENST00000463375 ARHGEF15O94989 841 aa4.38□□□□□ -1.71
TMEM56-204ENST00000463375 SLURP2P0DP57 97 aa4.38□□□□□ -1.71
TMEM56-204ENST00000463375 SVOPQ8N4V2 548 aa4.38□□□□□ -1.71
TMEM56-204ENST00000463375 GPR161Q8N6U8 529 aaKnown RBP4.38□□□□□ -1.71
TMEM56-204ENST00000463375 CFAP44Q96MT7 982 aa4.38□□□□□ -1.71
TMEM56-204ENST00000463375 CNTNAP3BQ96NU0 1288 aa4.38□□□□□ -1.71
TMEM56-204ENST00000463375 CNTNAP3Q9BZ76 1288 aa4.38□□□□□ -1.71
TMEM56-204ENST00000463375 PTPRNQ16849 979 aa4.37□□□□□ -1.71
TMEM56-204ENST00000463375 RBM26Q5T8P6 1007 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms