RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 EP400Q96L91 3159 aa31.21■■■□□ 2.59
CPSF7-209ENST00000463244 USP21Q9UK80 565 aa31.21■■■□□ 2.59
CPSF7-209ENST00000463244 FNBP4Q8N3X1 1017 aaPredicted RBP31.19■■■□□ 2.58
CPSF7-209ENST00000463244 NPHP3Q7Z494 1330 aa31.18■■■□□ 2.58
CPSF7-209ENST00000463244 MYOM2P54296 1465 aa31.17■■■□□ 2.58
CPSF7-209ENST00000463244 PXDNQ92626 1479 aa31.17■■■□□ 2.58
CPSF7-209ENST00000463244 FOXD1Q16676 465 aa31.17■■■□□ 2.58
CPSF7-209ENST00000463244 ESCO1Q5FWF5 840 aa31.17■■■□□ 2.58
CPSF7-209ENST00000463244 TRPC5Q9UL62 973 aaPredicted RBP31.17■■■□□ 2.58
CPSF7-209ENST00000463244 ADGRF5Q8IZF2 1346 aa31.17■■■□□ 2.58
CPSF7-209ENST00000463244 TECPR2O15040 1411 aa31.15■■■□□ 2.58
CPSF7-209ENST00000463244 CCDC144AA2RUR9 1427 aa31.15■■■□□ 2.58
CPSF7-209ENST00000463244 IFT172Q9UG01 1749 aa31.14■■■□□ 2.58
CPSF7-209ENST00000463244 ATRNO75882 1429 aa31.14■■■□□ 2.58
CPSF7-209ENST00000463244 SPATA31E1Q6ZUB1 1445 aa31.14■■■□□ 2.58
CPSF7-209ENST00000463244 ATAD2Q6PL18 1390 aa31.13■■■□□ 2.57
CPSF7-209ENST00000463244 MARF1Q9Y4F3 1742 aaKnown RBP31.12■■■□□ 2.57
CPSF7-209ENST00000463244 KNDC1Q76NI1 1749 aa31.1■■■□□ 2.57
CPSF7-209ENST00000463244 LRPPRCP42704 1394 aaKnown RBP31.1■■■□□ 2.57
CPSF7-209ENST00000463244 ANKRD30BQ9BXX2 1392 aa31.1■■■□□ 2.57
CPSF7-209ENST00000463244 FOXO3O43524 673 aa31.09■■■□□ 2.57
CPSF7-209ENST00000463244 RGL3Q3MIN7 710 aa31.09■■■□□ 2.57
CPSF7-209ENST00000463244 WAPLQ7Z5K2 1190 aa31.09■■■□□ 2.57
CPSF7-209ENST00000463244 STK26Q9P289 416 aa31.09■■■□□ 2.57
CPSF7-209ENST00000463244 BCL9LQ86UU0 1499 aa31.08■■■□□ 2.57
CPSF7-209ENST00000463244 ABCC11Q96J66 1382 aa31.07■■■□□ 2.56
CPSF7-209ENST00000463244 XPCQ01831 940 aaPredicted RBP31.07■■■□□ 2.56
CPSF7-209ENST00000463244 PIK3C2GO75747 1445 aa31.06■■■□□ 2.56
CPSF7-209ENST00000463244 PLEKHH1Q9ULM0 1364 aa31.05■■■□□ 2.56
CPSF7-209ENST00000463244 FMN2Q9NZ56 1722 aa31.04■■■□□ 2.56
CPSF7-209ENST00000463244 NUTM2FA1L443 756 aa31.03■■■□□ 2.56
CPSF7-209ENST00000463244 TMEM132EQ6IEE7 984 aa31.03■■■□□ 2.56
CPSF7-209ENST00000463244 MPHOSPH9Q99550 1183 aa31.03■■■□□ 2.56
CPSF7-209ENST00000463244 KIF1AQ12756 1690 aa31■■■□□ 2.55
CPSF7-209ENST00000463244 YTHDC2Q9H6S0 1430 aaKnown RBP30.99■■■□□ 2.55
CPSF7-209ENST00000463244 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.98■■■□□ 2.55
CPSF7-209ENST00000463244 GJD4Q96KN9 370 aaPredicted RBP30.96■■■□□ 2.55
CPSF7-209ENST00000463244 SPATA31A3Q5VYP0 1347 aa30.96■■■□□ 2.55
CPSF7-209ENST00000463244 SIRT1Q96EB6 747 aa30.93■■■□□ 2.54
CPSF7-209ENST00000463244 SLIT2O94813 1529 aa30.93■■■□□ 2.54
CPSF7-209ENST00000463244 RGPD8O14715 1765 aaPredicted RBP30.92■■■□□ 2.54
CPSF7-209ENST00000463244 USP32Q8NFA0 1604 aa30.91■■■□□ 2.54
CPSF7-209ENST00000463244 CCDC125Q86Z20 511 aa30.9■■■□□ 2.54
CPSF7-209ENST00000463244 UNC5CLQ8IV45 518 aa30.9■■■□□ 2.54
CPSF7-209ENST00000463244 C14orf93Q9H972 538 aaKnown RBP30.9■■■□□ 2.54
CPSF7-209ENST00000463244 NRXN1Q9ULB1 1477 aa30.89■■■□□ 2.54
CPSF7-209ENST00000463244 GLI3P10071 1580 aa30.89■■■□□ 2.54
CPSF7-209ENST00000463244 KRT28Q7Z3Y7 464 aa30.89■■■□□ 2.54
CPSF7-209ENST00000463244 RALGAPBQ86X10 1494 aa30.88■■■□□ 2.53
CPSF7-209ENST00000463244 TNS3Q68CZ2 1445 aa30.86■■■□□ 2.53
CPSF7-209ENST00000463244 ZRANB1Q9UGI0 708 aa30.85■■■□□ 2.53
CPSF7-209ENST00000463244 PHF8Q9UPP1 1060 aa30.85■■■□□ 2.53
CPSF7-209ENST00000463244 DHX57Q6P158 1386 aaKnown RBP30.83■■■□□ 2.53
CPSF7-209ENST00000463244 CFAP70Q5T0N1 1121 aa30.83■■■□□ 2.53
CPSF7-209ENST00000463244 ACIN1Q9UKV3 1341 aaKnown RBP30.81■■■□□ 2.52
CPSF7-209ENST00000463244 PSME1Q06323 249 aa30.81■■■□□ 2.52
CPSF7-209ENST00000463244 BRWD3Q6RI45 1802 aa30.81■■■□□ 2.52
CPSF7-209ENST00000463244 SBNO1A3KN83 1393 aa30.79■■■□□ 2.52
CPSF7-209ENST00000463244 ABCA3Q99758 1704 aa30.78■■■□□ 2.52
CPSF7-209ENST00000463244 NWD2Q9ULI1 1742 aa30.78■■■□□ 2.52
CPSF7-209ENST00000463244 PRAM1Q96QH2 718 aa30.78■■■□□ 2.52
CPSF7-209ENST00000463244 PLCH1Q4KWH8 1693 aa30.78■■■□□ 2.52
CPSF7-209ENST00000463244 HAP1P54257 671 aaPredicted RBP30.77■■■□□ 2.52
CPSF7-209ENST00000463244 CABLES1Q8TDN4 633 aa30.77■■■□□ 2.52
CPSF7-209ENST00000463244 DLC1Q96QB1 1528 aa30.77■■■□□ 2.52
CPSF7-209ENST00000463244 BLMP54132 1417 aaPredicted RBP30.76■■■□□ 2.51
CPSF7-209ENST00000463244 SAFB2Q14151 953 aaKnown RBP eCLIP30.76■■■□□ 2.51
CPSF7-209ENST00000463244 VPS72Q15906 364 aa30.74■■■□□ 2.51
CPSF7-209ENST00000463244 ARHGEF10O15013 1369 aa30.74■■■□□ 2.51
CPSF7-209ENST00000463244 ADGRB2O60241 1585 aa30.73■■■□□ 2.51
CPSF7-209ENST00000463244 ANKARQ7Z5J8 1434 aa30.73■■■□□ 2.51
CPSF7-209ENST00000463244 SEPT12Q8IYM1 358 aa30.72■■■□□ 2.51
CPSF7-209ENST00000463244 LMOD2Q6P5Q4 547 aa30.7■■■□□ 2.51
CPSF7-209ENST00000463244 POGKQ9P215 609 aa30.7■■■□□ 2.51
CPSF7-209ENST00000463244 ADGRB1O14514 1584 aa30.7■■■□□ 2.5
CPSF7-209ENST00000463244 ONECUT3O60422 494 aaPredicted RBP30.69■■■□□ 2.5
CPSF7-209ENST00000463244 PLEKHG5O94827 1062 aa30.69■■■□□ 2.5
CPSF7-209ENST00000463244 PMFBP1Q8TBY8 1022 aa30.68■■■□□ 2.5
CPSF7-209ENST00000463244 TRPM3Q9HCF6 1732 aaPredicted RBP30.67■■■□□ 2.5
CPSF7-209ENST00000463244 CCDC9Q9Y3X0 531 aaKnown RBP30.65■■■□□ 2.5
CPSF7-209ENST00000463244 FAM83GA6ND36 823 aa30.64■■■□□ 2.5
CPSF7-209ENST00000463244 DEFB132Q7Z7B7 95 aa30.64■■■□□ 2.5
CPSF7-209ENST00000463244 NRAPQ86VF7 1730 aa30.64■■■□□ 2.5
CPSF7-209ENST00000463244 ALS2Q96Q42 1657 aa30.63■■■□□ 2.49
CPSF7-209ENST00000463244 RAB3GAP2Q9H2M9 1393 aa30.63■■■□□ 2.49
CPSF7-209ENST00000463244 SF3B2Q13435 895 aaKnown RBP30.61■■■□□ 2.49
CPSF7-209ENST00000463244 KRT27Q7Z3Y8 459 aa30.61■■■□□ 2.49
CPSF7-209ENST00000463244 HIRIP3Q9BW71 556 aaPredicted RBP30.61■■■□□ 2.49
CPSF7-209ENST00000463244 TRAK1Q9UPV9 953 aa30.61■■■□□ 2.49
CPSF7-209ENST00000463244 TULP4Q9NRJ4 1543 aa30.59■■■□□ 2.49
CPSF7-209ENST00000463244 EIF3AQ14152 1382 aaKnown RBP30.59■■■□□ 2.49
CPSF7-209ENST00000463244 GPRASP1Q5JY77 1395 aa30.58■■■□□ 2.49
CPSF7-209ENST00000463244 PRR36Q9H6K5 1346 aa30.58■■■□□ 2.49
CPSF7-209ENST00000463244 COL14A1Q05707 1796 aaKnown RBP30.57■■■□□ 2.48
CPSF7-209ENST00000463244 MINK1Q8N4C8 1332 aaPredicted RBP30.57■■■□□ 2.48
CPSF7-209ENST00000463244 BTG4Q9NY30 223 aa30.55■■■□□ 2.48
CPSF7-209ENST00000463244 CRYBG1Q9Y4K1 1723 aa30.54■■■□□ 2.48
CPSF7-209ENST00000463244 WASLO00401 505 aaPredicted RBP30.54■■■□□ 2.48
CPSF7-209ENST00000463244 FAM98CQ17RN3 349 aaKnown RBP30.52■■■□□ 2.48
CPSF7-209ENST00000463244 KDM2AQ9Y2K7 1162 aa30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms