RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ADGRL3Q9HAR2 1447 aa28.82■■■□□ 2.2
NUP43-205ENST00000463048 NCOA3Q9Y6Q9 1424 aa28.82■■■□□ 2.2
NUP43-205ENST00000463048 ATF3P18847 181 aa28.81■■■□□ 2.2
NUP43-205ENST00000463048 TOM1O60784 492 aa28.8■■■□□ 2.2
NUP43-205ENST00000463048 MINK1Q8N4C8 1332 aaPredicted RBP28.79■■■□□ 2.2
NUP43-205ENST00000463048 SIRT1Q96EB6 747 aa28.79■■■□□ 2.2
NUP43-205ENST00000463048 HIRIP3Q9BW71 556 aaPredicted RBP28.79■■■□□ 2.2
NUP43-205ENST00000463048 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
NUP43-205ENST00000463048 NUTM2FA1L443 756 aa28.75■■■□□ 2.19
NUP43-205ENST00000463048 FBXO41Q8TF61 875 aa28.75■■■□□ 2.19
NUP43-205ENST00000463048 CADPS2Q86UW7 1296 aa28.74■■■□□ 2.19
NUP43-205ENST00000463048 CENPJQ9HC77 1338 aaPredicted RBP28.71■■■□□ 2.19
NUP43-205ENST00000463048 SLAIN2Q9P270 581 aa28.71■■■□□ 2.19
NUP43-205ENST00000463048 QRICH2Q9H0J4 1663 aa28.69■■■□□ 2.18
NUP43-205ENST00000463048 DCCP43146 1447 aa28.69■■■□□ 2.18
NUP43-205ENST00000463048 EIF3AQ14152 1382 aaKnown RBP28.68■■■□□ 2.18
NUP43-205ENST00000463048 CDC42BPGQ6DT37 1551 aa28.67■■■□□ 2.18
NUP43-205ENST00000463048 MST1RQ04912 1400 aa28.66■■■□□ 2.18
NUP43-205ENST00000463048 ILDR1Q86SU0 546 aaPredicted RBP28.64■■■□□ 2.18
NUP43-205ENST00000463048 ROBO1Q9Y6N7 1651 aa28.62■■■□□ 2.17
NUP43-205ENST00000463048 FMN2Q9NZ56 1722 aa28.62■■■□□ 2.17
NUP43-205ENST00000463048 USP47Q96K76 1375 aa28.62■■■□□ 2.17
NUP43-205ENST00000463048 ADGRB2O60241 1585 aa28.61■■■□□ 2.17
NUP43-205ENST00000463048 C1orf167Q5SNV9 1468 aa28.6■■■□□ 2.17
NUP43-205ENST00000463048 WASLO00401 505 aaPredicted RBP28.6■■■□□ 2.17
NUP43-205ENST00000463048 ST20-MTHFSA0A0A6YYL1 179 aa28.59■■■□□ 2.17
NUP43-205ENST00000463048 ORAI2Q96SN7 254 aa28.59■■■□□ 2.17
NUP43-205ENST00000463048 CDK19Q9BWU1 502 aa28.59■■■□□ 2.17
NUP43-205ENST00000463048 ESCO1Q5FWF5 840 aa28.57■■■□□ 2.16
NUP43-205ENST00000463048 RGPD8O14715 1765 aaPredicted RBP28.56■■■□□ 2.16
NUP43-205ENST00000463048 BRINP3Q76B58 766 aa28.56■■■□□ 2.16
NUP43-205ENST00000463048 SRPK2P78362 688 aaKnown RBP28.55■■■□□ 2.16
NUP43-205ENST00000463048 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
NUP43-205ENST00000463048 CABP2Q9NPB3 220 aa28.54■■■□□ 2.16
NUP43-205ENST00000463048 TULP4Q9NRJ4 1543 aa28.53■■■□□ 2.16
NUP43-205ENST00000463048 PRR36Q9H6K5 1346 aa28.52■■■□□ 2.16
NUP43-205ENST00000463048 USP32Q8NFA0 1604 aa28.52■■■□□ 2.16
NUP43-205ENST00000463048 HSPA1LP34931 641 aa28.52■■■□□ 2.16
NUP43-205ENST00000463048 EVC2Q86UK5 1308 aa28.5■■■□□ 2.15
NUP43-205ENST00000463048 NUDT16Q96DE0 195 aaKnown RBP28.49■■■□□ 2.15
NUP43-205ENST00000463048 HSPA5P11021 654 aaKnown RBP28.48■■■□□ 2.15
NUP43-205ENST00000463048 PMFBP1Q8TBY8 1022 aa28.48■■■□□ 2.15
NUP43-205ENST00000463048 EIF4G2P78344 907 aaKnown RBP eCLIP28.47■■■□□ 2.15
NUP43-205ENST00000463048 ANKARQ7Z5J8 1434 aa28.46■■■□□ 2.15
NUP43-205ENST00000463048 TESK2Q96S53 571 aa28.46■■■□□ 2.15
NUP43-205ENST00000463048 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
NUP43-205ENST00000463048 PHF8Q9UPP1 1060 aa28.45■■■□□ 2.14
NUP43-205ENST00000463048 PHLPP1O60346 1717 aa28.45■■■□□ 2.14
NUP43-205ENST00000463048 ATP7BP35670 1465 aa28.45■■■□□ 2.14
NUP43-205ENST00000463048 FOXO3O43524 673 aa28.44■■■□□ 2.14
NUP43-205ENST00000463048 SBNO2Q9Y2G9 1366 aa28.43■■■□□ 2.14
NUP43-205ENST00000463048 NHSL1Q5SYE7 1610 aa28.4■■■□□ 2.14
NUP43-205ENST00000463048 ITSN1Q15811 1721 aa28.4■■■□□ 2.14
NUP43-205ENST00000463048 DISP3Q9P2K9 1392 aa28.39■■■□□ 2.14
NUP43-205ENST00000463048 KIF1AQ12756 1690 aa28.39■■■□□ 2.14
NUP43-205ENST00000463048 CCDC61Q9Y6R9 512 aa28.38■■■□□ 2.13
NUP43-205ENST00000463048 AHDC1Q5TGY3 1603 aaPredicted RBP28.38■■■□□ 2.13
NUP43-205ENST00000463048 PPIP5K1Q6PFW1 1433 aa28.37■■■□□ 2.13
NUP43-205ENST00000463048 TMF1P82094 1093 aa28.37■■■□□ 2.13
NUP43-205ENST00000463048 NGDNQ8NEJ9 315 aaKnown RBP28.37■■■□□ 2.13
NUP43-205ENST00000463048 TOPAZ1Q8N9V7 1692 aa28.37■■■□□ 2.13
NUP43-205ENST00000463048 POLR3GLQ9BT43 218 aa28.35■■■□□ 2.13
NUP43-205ENST00000463048 CABP1Q9NZU7 370 aa28.35■■■□□ 2.13
NUP43-205ENST00000463048 NPHP3Q7Z494 1330 aa28.35■■■□□ 2.13
NUP43-205ENST00000463048 COL16A1Q07092 1604 aaPredicted RBP28.35■■■□□ 2.13
NUP43-205ENST00000463048 ZEB1P37275 1124 aaPredicted RBP28.34■■■□□ 2.13
NUP43-205ENST00000463048 PSME1Q06323 249 aa28.34■■■□□ 2.13
NUP43-205ENST00000463048 TMC1Q8TDI8 760 aa28.34■■■□□ 2.13
NUP43-205ENST00000463048 KRT28Q7Z3Y7 464 aa28.33■■■□□ 2.13
NUP43-205ENST00000463048 ACEP12821 1306 aa28.31■■■□□ 2.12
NUP43-205ENST00000463048 ATAD2Q6PL18 1390 aa28.3■■■□□ 2.12
NUP43-205ENST00000463048 PXDNQ92626 1479 aa28.29■■■□□ 2.12
NUP43-205ENST00000463048 SLC24A1O60721 1099 aa28.29■■■□□ 2.12
NUP43-205ENST00000463048 SOS2Q07890 1332 aaPredicted RBP28.28■■■□□ 2.12
NUP43-205ENST00000463048 PLEKHG3A1L390 1219 aa28.28■■■□□ 2.12
NUP43-205ENST00000463048 PLEKHG5O94827 1062 aa28.28■■■□□ 2.12
NUP43-205ENST00000463048 LMOD2Q6P5Q4 547 aa28.26■■■□□ 2.11
NUP43-205ENST00000463048 SLC12A5Q9H2X9 1139 aa28.26■■■□□ 2.11
NUP43-205ENST00000463048 PAK3O75914 559 aaPredicted RBP28.25■■■□□ 2.11
NUP43-205ENST00000463048 LRRC59Q96AG4 307 aaKnown RBP28.25■■■□□ 2.11
NUP43-205ENST00000463048 CDCA8Q53HL2 280 aa28.23■■■□□ 2.11
NUP43-205ENST00000463048 POLR3AO14802 1390 aaPredicted RBP28.23■■■□□ 2.11
NUP43-205ENST00000463048 C11orf95C9JLR9 678 aaPredicted RBP28.22■■■□□ 2.11
NUP43-205ENST00000463048 JCADQ9P266 1359 aa28.21■■■□□ 2.11
NUP43-205ENST00000463048 PUS7Q96PZ0 661 aaKnown RBP28.2■■■□□ 2.1
NUP43-205ENST00000463048 TRPM3Q9HCF6 1732 aaPredicted RBP28.18■■■□□ 2.1
NUP43-205ENST00000463048 SPATA31A3Q5VYP0 1347 aa28.18■■■□□ 2.1
NUP43-205ENST00000463048 PNPLA6Q8IY17 1366 aa28.17■■■□□ 2.1
NUP43-205ENST00000463048 NUTM2BA6NNL0 878 aaPredicted RBP28.17■■■□□ 2.1
NUP43-205ENST00000463048 NUTM2EB1AL46 878 aaPredicted RBP28.17■■■□□ 2.1
NUP43-205ENST00000463048 NUTM2AQ8IVF1 878 aaPredicted RBP28.17■■■□□ 2.1
NUP43-205ENST00000463048 TNS3Q68CZ2 1445 aa28.17■■■□□ 2.1
NUP43-205ENST00000463048 AKAP12Q02952 1782 aa28.16■■■□□ 2.1
NUP43-205ENST00000463048 SBNO1A3KN83 1393 aa28.15■■■□□ 2.1
NUP43-205ENST00000463048 KTN1Q86UP2 1357 aaKnown RBP28.15■■■□□ 2.1
NUP43-205ENST00000463048 NUTM2GQ5VZR2 741 aa28.15■■■□□ 2.1
NUP43-205ENST00000463048 HDGFL2Q7Z4V5 671 aaPredicted RBP28.15■■■□□ 2.1
NUP43-205ENST00000463048 SHPRHQ149N8 1683 aa28.15■■■□□ 2.1
NUP43-205ENST00000463048 USP6P35125 1406 aa28.14■■■□□ 2.1
NUP43-205ENST00000463048 CD163L1Q9NR16 1453 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms