RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 J3QL48 77 aa6.31□□□□□ -1.4
CD46-210ENST00000462968 FCHSD2O94868 740 aa6.31□□□□□ -1.4
CD46-210ENST00000462968 FUT2Q10981 343 aa6.31□□□□□ -1.4
CD46-210ENST00000462968 BRICD5Q6PL45 260 aa6.31□□□□□ -1.4
CD46-210ENST00000462968 METTL3Q86U44 580 aaKnown RBP6.31□□□□□ -1.4
CD46-210ENST00000462968 KIFC2Q96AC6 838 aa6.31□□□□□ -1.4
CD46-210ENST00000462968 ERCC6Q03468 1493 aa6.3□□□□□ -1.4
CD46-210ENST00000462968 FAM181BA6NEQ2 426 aa6.3□□□□□ -1.4
CD46-210ENST00000462968 ATP6V1AP38606 617 aa6.3□□□□□ -1.4
CD46-210ENST00000462968 MSS51Q4VC12 460 aa6.3□□□□□ -1.4
CD46-210ENST00000462968 HPS1Q92902 700 aa6.3□□□□□ -1.4
CD46-210ENST00000462968 MRGPRX2Q96LB1 330 aa6.3□□□□□ -1.4
CD46-210ENST00000462968 ZBTB24O43167 697 aaPredicted RBP6.29□□□□□ -1.4
CD46-210ENST00000462968 TRIM32Q13049 653 aa6.29□□□□□ -1.4
CD46-210ENST00000462968 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.29□□□□□ -1.4
CD46-210ENST00000462968 GMPRP36959 345 aa6.28□□□□□ -1.4
CD46-210ENST00000462968 RNF19BQ6ZMZ0 732 aa6.27□□□□□ -1.41
CD46-210ENST00000462968 ZSCAN1Q8NBB4 408 aa6.27□□□□□ -1.41
CD46-210ENST00000462968 SLC16A10Q8TF71 515 aa6.27□□□□□ -1.41
CD46-210ENST00000462968 NXF1Q9UBU9 619 aaKnown RBP6.27□□□□□ -1.41
CD46-210ENST00000462968 DAXXQ9UER7 740 aaPredicted RBP6.27□□□□□ -1.41
CD46-210ENST00000462968 GCGRP47871 477 aa6.26□□□□□ -1.41
CD46-210ENST00000462968 MMP16P51512 607 aa6.26□□□□□ -1.41
CD46-210ENST00000462968 NPAS3Q8IXF0 933 aa6.26□□□□□ -1.41
CD46-210ENST00000462968 RDH13Q8NBN7 331 aa6.26□□□□□ -1.41
CD46-210ENST00000462968 KCNV2Q8TDN2 545 aa6.26□□□□□ -1.41
CD46-210ENST00000462968 PAXIP1Q6ZW49 1069 aaPredicted RBP6.25□□□□□ -1.41
CD46-210ENST00000462968 REPIN1Q9BWE0 567 aaKnown RBP6.25□□□□□ -1.41
CD46-210ENST00000462968 FECHP22830 423 aa6.24□□□□□ -1.41
CD46-210ENST00000462968 IRF7Q92985 503 aa6.24□□□□□ -1.41
CD46-210ENST00000462968 DDX11L8A8MPP1 907 aa6.23□□□□□ -1.41
CD46-210ENST00000462968 H3BM21 787 aa6.23□□□□□ -1.41
CD46-210ENST00000462968 SKOR1P84550 965 aa6.23□□□□□ -1.41
CD46-210ENST00000462968 HIC1Q14526 733 aa6.23□□□□□ -1.41
CD46-210ENST00000462968 CFAP44Q96MT7 982 aa6.23□□□□□ -1.41
CD46-210ENST00000462968 SUZ12Q15022 739 aaKnown RBP6.22□□□□□ -1.41
CD46-210ENST00000462968 RC3H1Q5TC82 1133 aaKnown RBP6.22□□□□□ -1.41
CD46-210ENST00000462968 ERBB4Q15303 1308 aa6.22□□□□□ -1.41
CD46-210ENST00000462968 DXOO77932 396 aaKnown RBP6.21□□□□□ -1.42
CD46-210ENST00000462968 TRIM46Q7Z4K8 759 aa6.21□□□□□ -1.42
CD46-210ENST00000462968 WNT7BP56706 349 aa6.2□□□□□ -1.42
CD46-210ENST00000462968 SULF1Q8IWU6 871 aa6.2□□□□□ -1.42
CD46-210ENST00000462968 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
CD46-210ENST00000462968 VEGFBP49765 207 aa6.19□□□□□ -1.42
CD46-210ENST00000462968 Q3C1V9 767 aa6.19□□□□□ -1.42
CD46-210ENST00000462968 NLRP7Q8WX94 980 aa6.19□□□□□ -1.42
CD46-210ENST00000462968 GPR37O15354 613 aa6.18□□□□□ -1.42
CD46-210ENST00000462968 BMP1P13497 986 aa6.18□□□□□ -1.42
CD46-210ENST00000462968 GRIPAP1Q4V328 841 aa6.18□□□□□ -1.42
CD46-210ENST00000462968 PHOX2BQ99453 314 aa6.18□□□□□ -1.42
CD46-210ENST00000462968 SEMA3EO15041 775 aa6.17□□□□□ -1.42
CD46-210ENST00000462968 GNPATO15228 680 aa6.17□□□□□ -1.42
CD46-210ENST00000462968 SIAH2O43255 324 aa6.17□□□□□ -1.42
CD46-210ENST00000462968 ALDH1A1P00352 501 aa6.17□□□□□ -1.42
CD46-210ENST00000462968 USB1Q9BQ65 265 aaKnown RBP6.17□□□□□ -1.42
CD46-210ENST00000462968 GSK3AP49840 483 aa6.16□□□□□ -1.42
CD46-210ENST00000462968 CAPN5O15484 640 aaPredicted RBP6.15□□□□□ -1.42
CD46-210ENST00000462968 VSIG8P0DPA2 414 aa6.14□□□□□ -1.43
CD46-210ENST00000462968 KCNMA1Q12791 1236 aa6.13□□□□□ -1.43
CD46-210ENST00000462968 RBM26Q5T8P6 1007 aaKnown RBP6.13□□□□□ -1.43
CD46-210ENST00000462968 CCDC24Q8N4L8 307 aa6.13□□□□□ -1.43
CD46-210ENST00000462968 CD46P15529 392 aa6.12□□□□□ -1.43
CD46-210ENST00000462968 ZFP42Q96MM3 310 aa6.12□□□□□ -1.43
CD46-210ENST00000462968 KCTD17Q8N5Z5 321 aa6.11□□□□□ -1.43
CD46-210ENST00000462968 TSHZ2Q9NRE2 1034 aa6.11□□□□□ -1.43
CD46-210ENST00000462968 DCAF1Q9Y4B6 1507 aa6.1□□□□□ -1.43
CD46-210ENST00000462968 NCAPD3P42695 1498 aa6.1□□□□□ -1.43
CD46-210ENST00000462968 TESPA1A2RU30 521 aaPredicted RBP6.1□□□□□ -1.43
CD46-210ENST00000462968 KDM4AO75164 1064 aa6.1□□□□□ -1.43
CD46-210ENST00000462968 EHBP1Q8NDI1 1231 aa6.1□□□□□ -1.43
CD46-210ENST00000462968 HLA-CQ95604 372 aa6.1□□□□□ -1.43
CD46-210ENST00000462968 WASF2Q9Y6W5 498 aa6.1□□□□□ -1.43
CD46-210ENST00000462968 JUNDP17535 347 aa6.09□□□□□ -1.43
CD46-210ENST00000462968 PTCRAQ6ISU1 281 aaPredicted RBP6.09□□□□□ -1.43
CD46-210ENST00000462968 P3H3Q8IVL6 736 aa6.09□□□□□ -1.43
CD46-210ENST00000462968 NESP48681 1621 aa6.08□□□□□ -1.44
CD46-210ENST00000462968 USP46P62068 366 aa6.07□□□□□ -1.44
CD46-210ENST00000462968 SH3BP2P78314 561 aa6.07□□□□□ -1.44
CD46-210ENST00000462968 HOXA2O43364 376 aa6.06□□□□□ -1.44
CD46-210ENST00000462968 MRPL14Q6P1L8 145 aaKnown RBP6.06□□□□□ -1.44
CD46-210ENST00000462968 NUDT12Q9BQG2 462 aa6.06□□□□□ -1.44
CD46-210ENST00000462968 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
CD46-210ENST00000462968 SOBPA7XYQ1 873 aa6.05□□□□□ -1.44
CD46-210ENST00000462968 MPNDQ8N594 471 aa6.05□□□□□ -1.44
CD46-210ENST00000462968 SMYD5Q6GMV2 418 aa6.04□□□□□ -1.44
CD46-210ENST00000462968 TMEM151AQ8N4L1 468 aa6.04□□□□□ -1.44
CD46-210ENST00000462968 TLL2Q9Y6L7 1015 aa6.04□□□□□ -1.44
CD46-210ENST00000462968 ZCCHC6Q5VYS8 1495 aaKnown RBP6.03□□□□□ -1.44
CD46-210ENST00000462968 TIMP2P16035 220 aa6.03□□□□□ -1.44
CD46-210ENST00000462968 GUCA2AQ02747 115 aa6.03□□□□□ -1.44
CD46-210ENST00000462968 RASSF7Q02833 373 aa6.03□□□□□ -1.44
CD46-210ENST00000462968 SCARF1Q14162 830 aa6.03□□□□□ -1.44
CD46-210ENST00000462968 RETREG3Q86VR2 466 aa6.03□□□□□ -1.44
CD46-210ENST00000462968 SYMPKQ92797 1274 aaKnown RBP6.03□□□□□ -1.44
CD46-210ENST00000462968 PURBQ96QR8 312 aaKnown RBP6.03□□□□□ -1.44
CD46-210ENST00000462968 KLF16Q9BXK1 252 aaPredicted RBP6.03□□□□□ -1.44
CD46-210ENST00000462968 PDS5BQ9NTI5 1447 aa6.02□□□□□ -1.45
CD46-210ENST00000462968 GDF11O95390 407 aa6.02□□□□□ -1.45
CD46-210ENST00000462968 NNTQ13423 1086 aa6.02□□□□□ -1.45
CD46-210ENST00000462968 CCNYL3P0C7X3 344 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms