RNA–Protein interactions for RNA: ENST00000462777.1

HLA-F-222, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 779 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-222ENST00000462777 STK26Q9P289 416 aa29.68■■■□□ 2.34
HLA-F-222ENST00000462777 NPHP3Q7Z494 1330 aa29.68■■■□□ 2.34
HLA-F-222ENST00000462777 ANKRD30BQ9BXX2 1392 aa29.67■■■□□ 2.34
HLA-F-222ENST00000462777 ACIN1Q9UKV3 1341 aaKnown RBP29.65■■■□□ 2.34
HLA-F-222ENST00000462777 USP21Q9UK80 565 aa29.64■■■□□ 2.34
HLA-F-222ENST00000462777 PPLO60437 1756 aa29.64■■■□□ 2.34
HLA-F-222ENST00000462777 LAMC1P11047 1609 aa29.62■■■□□ 2.33
HLA-F-222ENST00000462777 LRPPRCP42704 1394 aaKnown RBP29.62■■■□□ 2.33
HLA-F-222ENST00000462777 WAPLQ7Z5K2 1190 aa29.61■■■□□ 2.33
HLA-F-222ENST00000462777 TRPC5Q9UL62 973 aaPredicted RBP29.61■■■□□ 2.33
HLA-F-222ENST00000462777 SPATA31E1Q6ZUB1 1445 aa29.6■■■□□ 2.33
HLA-F-222ENST00000462777 FOXO3O43524 673 aa29.59■■■□□ 2.33
HLA-F-222ENST00000462777 FNBP4Q8N3X1 1017 aaPredicted RBP29.59■■■□□ 2.33
HLA-F-222ENST00000462777 RGS12O14924 1447 aa29.59■■■□□ 2.33
HLA-F-222ENST00000462777 TMEM132EQ6IEE7 984 aa29.58■■■□□ 2.33
HLA-F-222ENST00000462777 ABCC11Q96J66 1382 aa29.58■■■□□ 2.33
HLA-F-222ENST00000462777 NUTM2FA1L443 756 aa29.57■■■□□ 2.32
HLA-F-222ENST00000462777 CDC42BPGQ6DT37 1551 aa29.56■■■□□ 2.32
HLA-F-222ENST00000462777 TECPR2O15040 1411 aa29.56■■■□□ 2.32
HLA-F-222ENST00000462777 XPCQ01831 940 aaPredicted RBP29.54■■■□□ 2.32
HLA-F-222ENST00000462777 SIRT1Q96EB6 747 aa29.51■■■□□ 2.31
HLA-F-222ENST00000462777 PIK3C2GO75747 1445 aa29.51■■■□□ 2.31
HLA-F-222ENST00000462777 ATAD2Q6PL18 1390 aa29.5■■■□□ 2.31
HLA-F-222ENST00000462777 YTHDC2Q9H6S0 1430 aaKnown RBP29.49■■■□□ 2.31
HLA-F-222ENST00000462777 PLEKHH1Q9ULM0 1364 aa29.49■■■□□ 2.31
HLA-F-222ENST00000462777 PXDNQ92626 1479 aa29.48■■■□□ 2.31
HLA-F-222ENST00000462777 C14orf93Q9H972 538 aaKnown RBP29.48■■■□□ 2.31
HLA-F-222ENST00000462777 MYOM2P54296 1465 aa29.48■■■□□ 2.31
HLA-F-222ENST00000462777 COL22A1Q8NFW1 1626 aaPredicted RBP29.46■■■□□ 2.31
HLA-F-222ENST00000462777 ATRNO75882 1429 aa29.45■■■□□ 2.31
HLA-F-222ENST00000462777 DHX57Q6P158 1386 aaKnown RBP29.45■■■□□ 2.31
HLA-F-222ENST00000462777 KRT28Q7Z3Y7 464 aa29.42■■■□□ 2.3
HLA-F-222ENST00000462777 SPATA31A3Q5VYP0 1347 aa29.42■■■□□ 2.3
HLA-F-222ENST00000462777 PSME1Q06323 249 aa29.41■■■□□ 2.3
HLA-F-222ENST00000462777 CFAP70Q5T0N1 1121 aa29.41■■■□□ 2.3
HLA-F-222ENST00000462777 IFT172Q9UG01 1749 aa29.4■■■□□ 2.3
HLA-F-222ENST00000462777 HAP1P54257 671 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-222ENST00000462777 GJD4Q96KN9 370 aaPredicted RBP29.39■■■□□ 2.3
HLA-F-222ENST00000462777 PHF8Q9UPP1 1060 aa29.39■■■□□ 2.3
HLA-F-222ENST00000462777 BCL9LQ86UU0 1499 aa29.39■■■□□ 2.3
HLA-F-222ENST00000462777 KNDC1Q76NI1 1749 aa29.38■■■□□ 2.29
HLA-F-222ENST00000462777 UNC5CLQ8IV45 518 aa29.37■■■□□ 2.29
HLA-F-222ENST00000462777 POGKQ9P215 609 aa29.37■■■□□ 2.29
HLA-F-222ENST00000462777 PRAM1Q96QH2 718 aa29.36■■■□□ 2.29
HLA-F-222ENST00000462777 SAFB2Q14151 953 aaKnown RBP eCLIP29.35■■■□□ 2.29
HLA-F-222ENST00000462777 CCDC125Q86Z20 511 aa29.34■■■□□ 2.29
HLA-F-222ENST00000462777 NRXN1Q9ULB1 1477 aa29.33■■■□□ 2.29
HLA-F-222ENST00000462777 FMN2Q9NZ56 1722 aa29.32■■■□□ 2.28
HLA-F-222ENST00000462777 KIF1AQ12756 1690 aa29.32■■■□□ 2.28
HLA-F-222ENST00000462777 LMOD2Q6P5Q4 547 aa29.31■■■□□ 2.28
HLA-F-222ENST00000462777 RAB3GAP2Q9H2M9 1393 aa29.29■■■□□ 2.28
HLA-F-222ENST00000462777 TNS3Q68CZ2 1445 aa29.28■■■□□ 2.28
HLA-F-222ENST00000462777 ZRANB1Q9UGI0 708 aa29.27■■■□□ 2.28
HLA-F-222ENST00000462777 SBNO1A3KN83 1393 aa29.26■■■□□ 2.28
HLA-F-222ENST00000462777 SLIT2O94813 1529 aa29.26■■■□□ 2.27
HLA-F-222ENST00000462777 PLEKHG5O94827 1062 aa29.26■■■□□ 2.27
HLA-F-222ENST00000462777 ARHGEF10O15013 1369 aa29.26■■■□□ 2.27
HLA-F-222ENST00000462777 CABLES1Q8TDN4 633 aa29.25■■■□□ 2.27
HLA-F-222ENST00000462777 PMFBP1Q8TBY8 1022 aa29.24■■■□□ 2.27
HLA-F-222ENST00000462777 MARF1Q9Y4F3 1742 aaKnown RBP29.24■■■□□ 2.27
HLA-F-222ENST00000462777 STAC3Q96MF2 364 aa29.23■■■□□ 2.27
HLA-F-222ENST00000462777 TRAK1Q9UPV9 953 aa29.23■■■□□ 2.27
HLA-F-222ENST00000462777 KDM2AQ9Y2K7 1162 aa29.23■■■□□ 2.27
HLA-F-222ENST00000462777 RALGAPBQ86X10 1494 aa29.23■■■□□ 2.27
HLA-F-222ENST00000462777 ANKARQ7Z5J8 1434 aa29.22■■■□□ 2.27
HLA-F-222ENST00000462777 CCDC9Q9Y3X0 531 aaKnown RBP29.22■■■□□ 2.27
HLA-F-222ENST00000462777 DLC1Q96QB1 1528 aa29.21■■■□□ 2.27
HLA-F-222ENST00000462777 DCAF11Q8TEB1 546 aa29.21■■■□□ 2.27
HLA-F-222ENST00000462777 VPS72Q15906 364 aa29.2■■■□□ 2.26
HLA-F-222ENST00000462777 EIF3AQ14152 1382 aaKnown RBP29.2■■■□□ 2.26
HLA-F-222ENST00000462777 HIRIP3Q9BW71 556 aaPredicted RBP29.19■■■□□ 2.26
HLA-F-222ENST00000462777 USP32Q8NFA0 1604 aa29.19■■■□□ 2.26
HLA-F-222ENST00000462777 GPRASP1Q5JY77 1395 aa29.17■■■□□ 2.26
HLA-F-222ENST00000462777 SEPT12Q8IYM1 358 aa29.16■■■□□ 2.26
HLA-F-222ENST00000462777 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.16■■■□□ 2.26
HLA-F-222ENST00000462777 MINK1Q8N4C8 1332 aaPredicted RBP29.16■■■□□ 2.26
HLA-F-222ENST00000462777 SF3B2Q13435 895 aaKnown RBP29.15■■■□□ 2.26
HLA-F-222ENST00000462777 WASLO00401 505 aaPredicted RBP29.13■■■□□ 2.25
HLA-F-222ENST00000462777 FAM83GA6ND36 823 aa29.12■■■□□ 2.25
HLA-F-222ENST00000462777 HRCP23327 699 aa29.12■■■□□ 2.25
HLA-F-222ENST00000462777 GLI3P10071 1580 aa29.12■■■□□ 2.25
HLA-F-222ENST00000462777 BLMP54132 1417 aaPredicted RBP29.11■■■□□ 2.25
HLA-F-222ENST00000462777 ADGRB1O14514 1584 aa29.11■■■□□ 2.25
HLA-F-222ENST00000462777 NGDNQ8NEJ9 315 aaKnown RBP29.11■■■□□ 2.25
HLA-F-222ENST00000462777 RGPD8O14715 1765 aaPredicted RBP29.11■■■□□ 2.25
HLA-F-222ENST00000462777 ONECUT3O60422 494 aaPredicted RBP29.1■■■□□ 2.25
HLA-F-222ENST00000462777 A0A0G2JS52 829 aa29.09■■■□□ 2.25
HLA-F-222ENST00000462777 MYT1Q01538 1121 aa29.09■■■□□ 2.25
HLA-F-222ENST00000462777 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
HLA-F-222ENST00000462777 KRT27Q7Z3Y8 459 aa29.08■■■□□ 2.25
HLA-F-222ENST00000462777 EP400Q96L91 3159 aa29.07■■■□□ 2.24
HLA-F-222ENST00000462777 PRR36Q9H6K5 1346 aa29.06■■■□□ 2.24
HLA-F-222ENST00000462777 PAK3O75914 559 aaPredicted RBP29.06■■■□□ 2.24
HLA-F-222ENST00000462777 BTG4Q9NY30 223 aa29.06■■■□□ 2.24
HLA-F-222ENST00000462777 TULP4Q9NRJ4 1543 aa29.04■■■□□ 2.24
HLA-F-222ENST00000462777 NWD2Q9ULI1 1742 aa29.02■■■□□ 2.24
HLA-F-222ENST00000462777 DEFB132Q7Z7B7 95 aa29.01■■■□□ 2.23
HLA-F-222ENST00000462777 FAM98CQ17RN3 349 aaKnown RBP29■■■□□ 2.23
HLA-F-222ENST00000462777 NUDT16Q96DE0 195 aaKnown RBP28.99■■■□□ 2.23
HLA-F-222ENST00000462777 SRCAPQ6ZRS2 3230 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms