RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SAFB2Q14151 953 aaKnown RBP eCLIP14.8□□□□□ -0.04
RTF1-202ENST00000462276 KIF7Q2M1P5 1343 aa14.8□□□□□ -0.04
RTF1-202ENST00000462276 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
RTF1-202ENST00000462276 STRCQ7RTU9 1775 aa14.8□□□□□ -0.04
RTF1-202ENST00000462276 C11orf95C9JLR9 678 aaPredicted RBP14.79□□□□□ -0.04
RTF1-202ENST00000462276 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
RTF1-202ENST00000462276 PLEKHH1Q9ULM0 1364 aa14.79□□□□□ -0.04
RTF1-202ENST00000462276 C19orf44Q9H6X5 657 aa14.78□□□□□ -0.04
RTF1-202ENST00000462276 KNDC1Q76NI1 1749 aa14.78□□□□□ -0.04
RTF1-202ENST00000462276 NWD1Q149M9 1564 aa14.77□□□□□ -0.04
RTF1-202ENST00000462276 ATAD2Q6PL18 1390 aa14.77□□□□□ -0.04
RTF1-202ENST00000462276 NINLQ9Y2I6 1382 aa14.77□□□□□ -0.04
RTF1-202ENST00000462276 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.05
RTF1-202ENST00000462276 CDK19Q9BWU1 502 aa14.77□□□□□ -0.05
RTF1-202ENST00000462276 XRN1Q8IZH2 1706 aaKnown RBP14.77□□□□□ -0.05
RTF1-202ENST00000462276 DISP3Q9P2K9 1392 aa14.76□□□□□ -0.05
RTF1-202ENST00000462276 C14orf37Q86TY3 774 aa14.75□□□□□ -0.05
RTF1-202ENST00000462276 ARHGEF28Q8N1W1 1705 aaKnown RBP14.75□□□□□ -0.05
RTF1-202ENST00000462276 ZNF335Q9H4Z2 1342 aaPredicted RBP14.74□□□□□ -0.05
RTF1-202ENST00000462276 CHD2O14647 1828 aaKnown RBP14.74□□□□□ -0.05
RTF1-202ENST00000462276 CCDC61Q9Y6R9 512 aa14.74□□□□□ -0.05
RTF1-202ENST00000462276 ADGRL3Q9HAR2 1447 aa14.74□□□□□ -0.05
RTF1-202ENST00000462276 TMEM94Q12767 1356 aa14.73□□□□□ -0.05
RTF1-202ENST00000462276 DDX10Q13206 875 aaKnown RBP14.72□□□□□ -0.05
RTF1-202ENST00000462276 CADPS2Q86UW7 1296 aa14.72□□□□□ -0.05
RTF1-202ENST00000462276 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
RTF1-202ENST00000462276 CABP2Q9NPB3 220 aa14.72□□□□□ -0.05
RTF1-202ENST00000462276 ATF3P18847 181 aa14.71□□□□□ -0.05
RTF1-202ENST00000462276 NUDT16Q96DE0 195 aaKnown RBP14.71□□□□□ -0.05
RTF1-202ENST00000462276 DCCP43146 1447 aa14.71□□□□□ -0.05
RTF1-202ENST00000462276 ADGRB2O60241 1585 aa14.7□□□□□ -0.06
RTF1-202ENST00000462276 ANKARQ7Z5J8 1434 aa14.7□□□□□ -0.06
RTF1-202ENST00000462276 TERF2IPQ9NYB0 399 aa14.7□□□□□ -0.06
RTF1-202ENST00000462276 MSH6P52701 1360 aa14.7□□□□□ -0.06
RTF1-202ENST00000462276 LTBP4Q8N2S1 1624 aa14.7□□□□□ -0.06
RTF1-202ENST00000462276 QRICH2Q9H0J4 1663 aa14.69□□□□□ -0.06
RTF1-202ENST00000462276 PLEKHG3A1L390 1219 aa14.69□□□□□ -0.06
RTF1-202ENST00000462276 ILDR2Q71H61 639 aa14.69□□□□□ -0.06
RTF1-202ENST00000462276 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
RTF1-202ENST00000462276 TULP4Q9NRJ4 1543 aa14.69□□□□□ -0.06
RTF1-202ENST00000462276 LRRC7Q96NW7 1537 aa14.68□□□□□ -0.06
RTF1-202ENST00000462276 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
RTF1-202ENST00000462276 HDGFL2Q7Z4V5 671 aaPredicted RBP14.67□□□□□ -0.06
RTF1-202ENST00000462276 SLC12A5Q9H2X9 1139 aa14.67□□□□□ -0.06
RTF1-202ENST00000462276 PANK3Q9H999 370 aa14.67□□□□□ -0.06
RTF1-202ENST00000462276 CABP1Q9NZU7 370 aa14.67□□□□□ -0.06
RTF1-202ENST00000462276 DIEXFQ68CQ4 756 aaKnown RBP14.66□□□□□ -0.06
RTF1-202ENST00000462276 RBM33Q96EV2 1170 aaKnown RBP14.66□□□□□ -0.06
RTF1-202ENST00000462276 CDC42BPGQ6DT37 1551 aa14.65□□□□□ -0.06
RTF1-202ENST00000462276 PRR36Q9H6K5 1346 aa14.65□□□□□ -0.06
RTF1-202ENST00000462276 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.64□□□□□ -0.07
RTF1-202ENST00000462276 ANKRD36BQ8N2N9 1353 aa14.64□□□□□ -0.07
RTF1-202ENST00000462276 KNSTRNQ9Y448 316 aa14.64□□□□□ -0.07
RTF1-202ENST00000462276 PER1O15534 1290 aaPredicted RBP14.63□□□□□ -0.07
RTF1-202ENST00000462276 PPIP5K1Q6PFW1 1433 aa14.62□□□□□ -0.07
RTF1-202ENST00000462276 ATP7BP35670 1465 aa14.62□□□□□ -0.07
RTF1-202ENST00000462276 IQSEC2Q5JU85 1478 aa14.62□□□□□ -0.07
RTF1-202ENST00000462276 BRD4O60885 1362 aaPredicted RBP14.61□□□□□ -0.07
RTF1-202ENST00000462276 ESCO1Q5FWF5 840 aa14.61□□□□□ -0.07
RTF1-202ENST00000462276 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
RTF1-202ENST00000462276 PHF8Q9UPP1 1060 aa14.61□□□□□ -0.07
RTF1-202ENST00000462276 NPC1L1Q9UHC9 1359 aa14.6□□□□□ -0.07
RTF1-202ENST00000462276 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
RTF1-202ENST00000462276 NGDNQ8NEJ9 315 aaKnown RBP14.6□□□□□ -0.07
RTF1-202ENST00000462276 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
RTF1-202ENST00000462276 CPSF1Q10570 1443 aaKnown RBP14.59□□□□□ -0.07
RTF1-202ENST00000462276 C1orf167Q5SNV9 1468 aa14.59□□□□□ -0.07
RTF1-202ENST00000462276 SOCS7O14512 581 aa14.59□□□□□ -0.07
RTF1-202ENST00000462276 CARD14Q9BXL6 1004 aa14.59□□□□□ -0.07
RTF1-202ENST00000462276 ACEP12821 1306 aa14.59□□□□□ -0.07
RTF1-202ENST00000462276 CGNL1Q0VF96 1302 aa14.59□□□□□ -0.07
RTF1-202ENST00000462276 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
RTF1-202ENST00000462276 STRCP1A6NGW2 1772 aa14.58□□□□□ -0.08
RTF1-202ENST00000462276 ANP32CO43423 234 aa14.58□□□□□ -0.08
RTF1-202ENST00000462276 MST1RQ04912 1400 aa14.58□□□□□ -0.08
RTF1-202ENST00000462276 TOM1O60784 492 aa14.57□□□□□ -0.08
RTF1-202ENST00000462276 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
RTF1-202ENST00000462276 RALBP1Q15311 655 aa14.56□□□□□ -0.08
RTF1-202ENST00000462276 AMER1Q5JTC6 1135 aaPredicted RBP14.56□□□□□ -0.08
RTF1-202ENST00000462276 NSD2O96028 1365 aa14.56□□□□□ -0.08
RTF1-202ENST00000462276 EDC4Q6P2E9 1401 aaKnown RBP14.56□□□□□ -0.08
RTF1-202ENST00000462276 PSME1Q06323 249 aa14.55□□□□□ -0.08
RTF1-202ENST00000462276 PMFBP1Q8TBY8 1022 aa14.55□□□□□ -0.08
RTF1-202ENST00000462276 ORAI2Q96SN7 254 aa14.55□□□□□ -0.08
RTF1-202ENST00000462276 TTC21AQ8NDW8 1320 aa14.55□□□□□ -0.08
RTF1-202ENST00000462276 NALCNQ8IZF0 1738 aa14.55□□□□□ -0.08
RTF1-202ENST00000462276 NPHP3Q7Z494 1330 aa14.54□□□□□ -0.08
RTF1-202ENST00000462276 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
RTF1-202ENST00000462276 FMN2Q9NZ56 1722 aa14.54□□□□□ -0.08
RTF1-202ENST00000462276 NSD3Q9BZ95 1437 aa14.53□□□□□ -0.08
RTF1-202ENST00000462276 USP6P35125 1406 aa14.52□□□□□ -0.08
RTF1-202ENST00000462276 TTC21BQ7Z4L5 1316 aa14.52□□□□□ -0.08
RTF1-202ENST00000462276 FOXO3O43524 673 aa14.52□□□□□ -0.09
RTF1-202ENST00000462276 BRINP3Q76B58 766 aa14.52□□□□□ -0.09
RTF1-202ENST00000462276 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.09
RTF1-202ENST00000462276 FYB1O15117 783 aa14.51□□□□□ -0.09
RTF1-202ENST00000462276 SSH2Q76I76 1423 aa14.5□□□□□ -0.09
RTF1-202ENST00000462276 KRT28Q7Z3Y7 464 aa14.5□□□□□ -0.09
RTF1-202ENST00000462276 USP32Q8NFA0 1604 aa14.49□□□□□ -0.09
RTF1-202ENST00000462276 MYOM1P52179 1685 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms