RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 SPHKAPQ2M3C7 1700 aa23.47■■□□□ 1.35
APP-211ENST00000462267 PRAG1Q86YV5 1406 aa23.47■■□□□ 1.35
APP-211ENST00000462267 SF3B2Q13435 895 aaKnown RBP23.46■■□□□ 1.35
APP-211ENST00000462267 ESCO1Q5FWF5 840 aa23.45■■□□□ 1.34
APP-211ENST00000462267 DEFB132Q7Z7B7 95 aa23.45■■□□□ 1.34
APP-211ENST00000462267 UNC5CLQ8IV45 518 aa23.45■■□□□ 1.34
APP-211ENST00000462267 LRP5O75197 1615 aa23.44■■□□□ 1.34
APP-211ENST00000462267 HFM1A2PYH4 1435 aa23.44■■□□□ 1.34
APP-211ENST00000462267 MARF1Q9Y4F3 1742 aaKnown RBP23.44■■□□□ 1.34
APP-211ENST00000462267 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
APP-211ENST00000462267 PXDNQ92626 1479 aa23.43■■□□□ 1.34
APP-211ENST00000462267 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
APP-211ENST00000462267 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.42■■□□□ 1.34
APP-211ENST00000462267 LRPPRCP42704 1394 aaKnown RBP23.41■■□□□ 1.34
APP-211ENST00000462267 FOXO3O43524 673 aa23.41■■□□□ 1.34
APP-211ENST00000462267 GLI3P10071 1580 aa23.4■■□□□ 1.34
APP-211ENST00000462267 SLIT2O94813 1529 aa23.39■■□□□ 1.34
APP-211ENST00000462267 CLTCL1P53675 1640 aa23.38■■□□□ 1.33
APP-211ENST00000462267 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
APP-211ENST00000462267 CDC42BPGQ6DT37 1551 aa23.36■■□□□ 1.33
APP-211ENST00000462267 SEPT12Q8IYM1 358 aa23.36■■□□□ 1.33
APP-211ENST00000462267 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.32
APP-211ENST00000462267 KIF1BO60333 1816 aa23.32■■□□□ 1.32
APP-211ENST00000462267 ONECUT3O60422 494 aaPredicted RBP23.32■■□□□ 1.32
APP-211ENST00000462267 HRCP23327 699 aa23.32■■□□□ 1.32
APP-211ENST00000462267 VPS72Q15906 364 aa23.32■■□□□ 1.32
APP-211ENST00000462267 SPATA31A3Q5VYP0 1347 aa23.32■■□□□ 1.32
APP-211ENST00000462267 BRWD3Q6RI45 1802 aa23.31■■□□□ 1.32
APP-211ENST00000462267 KRT27Q7Z3Y8 459 aa23.31■■□□□ 1.32
APP-211ENST00000462267 ITGAEP38570 1179 aa23.3■■□□□ 1.32
APP-211ENST00000462267 BAG6P46379 1132 aa23.3■■□□□ 1.32
APP-211ENST00000462267 PSDA5PKW4 1024 aaPredicted RBP23.29■■□□□ 1.32
APP-211ENST00000462267 NAIPQ13075 1403 aa23.28■■□□□ 1.32
APP-211ENST00000462267 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
APP-211ENST00000462267 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
APP-211ENST00000462267 NUTM2FA1L443 756 aa23.25■■□□□ 1.31
APP-211ENST00000462267 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
APP-211ENST00000462267 HAP1P54257 671 aaPredicted RBP23.24■■□□□ 1.31
APP-211ENST00000462267 KRT28Q7Z3Y7 464 aa23.23■■□□□ 1.31
APP-211ENST00000462267 TECPR2O15040 1411 aa23.2■■□□□ 1.3
APP-211ENST00000462267 WAPLQ7Z5K2 1190 aa23.2■■□□□ 1.3
APP-211ENST00000462267 NWD2Q9ULI1 1742 aa23.19■■□□□ 1.3
APP-211ENST00000462267 KIF1AQ12756 1690 aa23.19■■□□□ 1.3
APP-211ENST00000462267 PSME1Q06323 249 aa23.18■■□□□ 1.3
APP-211ENST00000462267 STK26Q9P289 416 aa23.18■■□□□ 1.3
APP-211ENST00000462267 TNS3Q68CZ2 1445 aa23.17■■□□□ 1.3
APP-211ENST00000462267 A0A0G2JS52 829 aa23.17■■□□□ 1.3
APP-211ENST00000462267 MYT1Q01538 1121 aa23.17■■□□□ 1.3
APP-211ENST00000462267 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
APP-211ENST00000462267 PPLO60437 1756 aa23.17■■□□□ 1.3
APP-211ENST00000462267 ABCC11Q96J66 1382 aa23.16■■□□□ 1.3
APP-211ENST00000462267 EN1Q05925 392 aaPredicted RBP23.16■■□□□ 1.3
APP-211ENST00000462267 R3HDM1Q15032 1099 aaKnown RBP23.15■■□□□ 1.3
APP-211ENST00000462267 PLCH1Q4KWH8 1693 aa23.14■■□□□ 1.29
APP-211ENST00000462267 SBNO1A3KN83 1393 aa23.14■■□□□ 1.29
APP-211ENST00000462267 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
APP-211ENST00000462267 FAM83GA6ND36 823 aa23.13■■□□□ 1.29
APP-211ENST00000462267 FAM98CQ17RN3 349 aaKnown RBP23.13■■□□□ 1.29
APP-211ENST00000462267 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
APP-211ENST00000462267 ARHGEF10O15013 1369 aa23.13■■□□□ 1.29
APP-211ENST00000462267 PLEKHH1Q9ULM0 1364 aa23.13■■□□□ 1.29
APP-211ENST00000462267 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
APP-211ENST00000462267 DISP2A7MBM2 1401 aa23.11■■□□□ 1.29
APP-211ENST00000462267 LMOD2Q6P5Q4 547 aa23.1■■□□□ 1.29
APP-211ENST00000462267 PLEKHG5O94827 1062 aa23.09■■□□□ 1.29
APP-211ENST00000462267 RRBP1Q9P2E9 1410 aaKnown RBP23.08■■□□□ 1.29
APP-211ENST00000462267 RGPD1P0DJD0 1748 aa23.08■■□□□ 1.29
APP-211ENST00000462267 YY1P25490 414 aa23.08■■□□□ 1.29
APP-211ENST00000462267 SIRT1Q96EB6 747 aa23.08■■□□□ 1.29
APP-211ENST00000462267 TMEM132EQ6IEE7 984 aa23.07■■□□□ 1.28
APP-211ENST00000462267 KNDC1Q76NI1 1749 aa23.06■■□□□ 1.28
APP-211ENST00000462267 SLC4A1APQ9BWU0 796 aaKnown RBP23.06■■□□□ 1.28
APP-211ENST00000462267 BTG4Q9NY30 223 aa23.06■■□□□ 1.28
APP-211ENST00000462267 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
APP-211ENST00000462267 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
APP-211ENST00000462267 ANKRD30BQ9BXX2 1392 aa23.04■■□□□ 1.28
APP-211ENST00000462267 YTHDC2Q9H6S0 1430 aaKnown RBP23.03■■□□□ 1.28
APP-211ENST00000462267 EZH2Q15910 746 aaKnown RBP23.03■■□□□ 1.28
APP-211ENST00000462267 FAM182BQ5T319 152 aa23.03■■□□□ 1.28
APP-211ENST00000462267 NRAPQ86VF7 1730 aa23.02■■□□□ 1.28
APP-211ENST00000462267 SPATA31A5Q5VU36 1347 aa23.02■■□□□ 1.28
APP-211ENST00000462267 SPATA31A7Q8IWB4 1347 aa23.02■■□□□ 1.28
APP-211ENST00000462267 CAMKK2Q96RR4 588 aa23.01■■□□□ 1.27
APP-211ENST00000462267 RGL3Q3MIN7 710 aa23■■□□□ 1.27
APP-211ENST00000462267 PARD3Q8TEW0 1356 aa22.99■■□□□ 1.27
APP-211ENST00000462267 RGPD8O14715 1765 aaPredicted RBP22.99■■□□□ 1.27
APP-211ENST00000462267 PIK3C2GO75747 1445 aa22.99■■□□□ 1.27
APP-211ENST00000462267 IFT172Q9UG01 1749 aa22.98■■□□□ 1.27
APP-211ENST00000462267 TNS1Q9HBL0 1735 aaKnown RBP22.97■■□□□ 1.27
APP-211ENST00000462267 COL14A1Q05707 1796 aaKnown RBP22.97■■□□□ 1.27
APP-211ENST00000462267 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
APP-211ENST00000462267 SPATA31E1Q6ZUB1 1445 aa22.97■■□□□ 1.27
APP-211ENST00000462267 ADGRB2O60241 1585 aa22.97■■□□□ 1.27
APP-211ENST00000462267 TRIM37O94972 964 aa22.95■■□□□ 1.26
APP-211ENST00000462267 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
APP-211ENST00000462267 THSD7AQ9UPZ6 1657 aa22.95■■□□□ 1.26
APP-211ENST00000462267 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
APP-211ENST00000462267 DCAF8L1A6NGE4 600 aa22.92■■□□□ 1.26
APP-211ENST00000462267 APBA3O96018 575 aa22.92■■□□□ 1.26
APP-211ENST00000462267 C14orf93Q9H972 538 aaKnown RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms