RNA–Protein interactions for RNA: ENST00000462257.1

SH3D19-205, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 882 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-205ENST00000462257 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
SH3D19-205ENST00000462257 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
SH3D19-205ENST00000462257 EID1Q9Y6B2 187 aa11.25□□□□□ -0.61
SH3D19-205ENST00000462257 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
SH3D19-205ENST00000462257 RGS17Q9UGC6 210 aaPredicted RBP11.24□□□□□ -0.61
SH3D19-205ENST00000462257 FAM135BQ49AJ0 1406 aa11.24□□□□□ -0.61
SH3D19-205ENST00000462257 SCAF11Q99590 1463 aaKnown RBP11.24□□□□□ -0.61
SH3D19-205ENST00000462257 UBR1Q8IWV7 1749 aa11.23□□□□□ -0.61
SH3D19-205ENST00000462257 TXNDC2Q86VQ3 553 aa11.23□□□□□ -0.61
SH3D19-205ENST00000462257 ERVK-7P63135 1459 aa11.23□□□□□ -0.61
SH3D19-205ENST00000462257 ABCC3O15438 1527 aa11.23□□□□□ -0.61
SH3D19-205ENST00000462257 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
SH3D19-205ENST00000462257 NCOA2Q15596 1464 aa11.22□□□□□ -0.61
SH3D19-205ENST00000462257 MAST1Q9Y2H9 1570 aa11.21□□□□□ -0.61
SH3D19-205ENST00000462257 SLIT1O75093 1534 aa11.21□□□□□ -0.61
SH3D19-205ENST00000462257 ERBB3P21860 1342 aa11.21□□□□□ -0.61
SH3D19-205ENST00000462257 RNF166Q96A37 237 aaPredicted RBP11.21□□□□□ -0.61
SH3D19-205ENST00000462257 CFAP65Q6ZU64 1925 aaKnown RBP11.21□□□□□ -0.62
SH3D19-205ENST00000462257 ARHGAP23Q9P227 1491 aa11.2□□□□□ -0.62
SH3D19-205ENST00000462257 XIRP1Q702N8 1843 aaKnown RBP11.2□□□□□ -0.62
SH3D19-205ENST00000462257 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
SH3D19-205ENST00000462257 LTKP29376 864 aa11.19□□□□□ -0.62
SH3D19-205ENST00000462257 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
SH3D19-205ENST00000462257 ARHGAP31Q2M1Z3 1444 aa11.18□□□□□ -0.62
SH3D19-205ENST00000462257 DOK7Q18PE1 504 aa11.18□□□□□ -0.62
SH3D19-205ENST00000462257 CEP152O94986 1710 aa11.18□□□□□ -0.62
SH3D19-205ENST00000462257 KDM5AP29375 1690 aaKnown RBP11.17□□□□□ -0.62
SH3D19-205ENST00000462257 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
SH3D19-205ENST00000462257 KCNA6P17658 529 aa11.17□□□□□ -0.62
SH3D19-205ENST00000462257 DPY19L2Q6NUT2 758 aa11.17□□□□□ -0.62
SH3D19-205ENST00000462257 POTEAQ6S8J7 498 aa11.17□□□□□ -0.62
SH3D19-205ENST00000462257 LRRC9Q6ZRR7 1453 aa11.17□□□□□ -0.62
SH3D19-205ENST00000462257 DUOX2Q9NRD8 1548 aa11.16□□□□□ -0.62
SH3D19-205ENST00000462257 VGFO15240 615 aaPredicted RBP11.16□□□□□ -0.62
SH3D19-205ENST00000462257 PROSER2Q86WR7 435 aaPredicted RBP11.16□□□□□ -0.62
SH3D19-205ENST00000462257 EFCAB3Q8N7B9 438 aa11.16□□□□□ -0.62
SH3D19-205ENST00000462257 TMEM2Q9UHN6 1383 aa11.16□□□□□ -0.62
SH3D19-205ENST00000462257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.15□□□□□ -0.62
SH3D19-205ENST00000462257 RIMBP2O15034 1052 aa11.15□□□□□ -0.62
SH3D19-205ENST00000462257 ZFP91Q96JP5 570 aaPredicted RBP11.15□□□□□ -0.62
SH3D19-205ENST00000462257 MROH1Q8NDA8 1641 aa11.15□□□□□ -0.62
SH3D19-205ENST00000462257 KANK1Q14678 1352 aa11.15□□□□□ -0.63
SH3D19-205ENST00000462257 ROBO1Q9Y6N7 1651 aa11.14□□□□□ -0.63
SH3D19-205ENST00000462257 MYOM3Q5VTT5 1437 aa11.14□□□□□ -0.63
SH3D19-205ENST00000462257 TMEM94Q12767 1356 aa11.14□□□□□ -0.63
SH3D19-205ENST00000462257 PIK3C2BO00750 1634 aa11.13□□□□□ -0.63
SH3D19-205ENST00000462257 ERBINQ96RT1 1412 aa11.12□□□□□ -0.63
SH3D19-205ENST00000462257 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
SH3D19-205ENST00000462257 SLAIN2Q9P270 581 aa11.12□□□□□ -0.63
SH3D19-205ENST00000462257 PRDM15P57071 1507 aaPredicted RBP11.12□□□□□ -0.63
SH3D19-205ENST00000462257 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
SH3D19-205ENST00000462257 MSH6P52701 1360 aa11.12□□□□□ -0.63
SH3D19-205ENST00000462257 JCADQ9P266 1359 aa11.12□□□□□ -0.63
SH3D19-205ENST00000462257 NKTRP30414 1462 aaKnown RBP11.11□□□□□ -0.63
SH3D19-205ENST00000462257 TET3O43151 1660 aa11.11□□□□□ -0.63
SH3D19-205ENST00000462257 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
SH3D19-205ENST00000462257 SLC26A8Q96RN1 970 aa11.1□□□□□ -0.63
SH3D19-205ENST00000462257 SLC52A1Q9NWF4 448 aa11.1□□□□□ -0.63
SH3D19-205ENST00000462257 KIF15Q9NS87 1388 aa11.1□□□□□ -0.63
SH3D19-205ENST00000462257 IDI1Q13907 227 aa11.09□□□□□ -0.63
SH3D19-205ENST00000462257 VARS2Q5ST30 1063 aaKnown RBP11.09□□□□□ -0.63
SH3D19-205ENST00000462257 ZNF772Q68DY9 489 aaPredicted RBP11.09□□□□□ -0.63
SH3D19-205ENST00000462257 MAP3K1Q13233 1512 aa11.09□□□□□ -0.63
SH3D19-205ENST00000462257 NCOA3Q9Y6Q9 1424 aa11.09□□□□□ -0.63
SH3D19-205ENST00000462257 SPATA31A6Q5VVP1 1343 aa11.09□□□□□ -0.63
SH3D19-205ENST00000462257 ECM2O94769 699 aaPredicted RBP11.08□□□□□ -0.64
SH3D19-205ENST00000462257 BCANQ96GW7 911 aa11.08□□□□□ -0.64
SH3D19-205ENST00000462257 RRP7BPQ9NSQ0 103 aa11.08□□□□□ -0.64
SH3D19-205ENST00000462257 NWD1Q149M9 1564 aa11.07□□□□□ -0.64
SH3D19-205ENST00000462257 SOX12O15370 315 aa11.07□□□□□ -0.64
SH3D19-205ENST00000462257 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
SH3D19-205ENST00000462257 FGD6Q6ZV73 1430 aa11.07□□□□□ -0.64
SH3D19-205ENST00000462257 MEX3CQ5U5Q3 659 aaKnown RBP11.06□□□□□ -0.64
SH3D19-205ENST00000462257 CROCC2H7BZ55 1655 aa11.05□□□□□ -0.64
SH3D19-205ENST00000462257 CHD2O14647 1828 aaKnown RBP11.05□□□□□ -0.64
SH3D19-205ENST00000462257 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
SH3D19-205ENST00000462257 UPF1Q92900 1129 aaKnown RBP eCLIP11.05□□□□□ -0.64
SH3D19-205ENST00000462257 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
SH3D19-205ENST00000462257 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
SH3D19-205ENST00000462257 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
SH3D19-205ENST00000462257 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
SH3D19-205ENST00000462257 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
SH3D19-205ENST00000462257 ADGRB3O60242 1522 aa11.04□□□□□ -0.64
SH3D19-205ENST00000462257 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 NOS1P29475 1434 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 RGL2O15211 777 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 RXRBP28702 533 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 PTGER2P43116 358 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.03□□□□□ -0.64
SH3D19-205ENST00000462257 MS4A4AQ96JQ5 239 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 BCL11BQ9C0K0 894 aaPredicted RBP11.03□□□□□ -0.64
SH3D19-205ENST00000462257 PLEKHG1Q9ULL1 1385 aa11.03□□□□□ -0.64
SH3D19-205ENST00000462257 COL16A1Q07092 1604 aaPredicted RBP11.02□□□□□ -0.64
SH3D19-205ENST00000462257 ABCC5O15440 1437 aa11.02□□□□□ -0.64
SH3D19-205ENST00000462257 RPRD2Q5VT52 1461 aaKnown RBP11.02□□□□□ -0.65
SH3D19-205ENST00000462257 PPP1R15AO75807 674 aaPredicted RBP11.02□□□□□ -0.65
SH3D19-205ENST00000462257 ATF3P18847 181 aa11.02□□□□□ -0.65
SH3D19-205ENST00000462257 KANK4Q5T7N3 995 aaPredicted RBP11.02□□□□□ -0.65
SH3D19-205ENST00000462257 C14orf37Q86TY3 774 aa11.02□□□□□ -0.65
SH3D19-205ENST00000462257 C19orf44Q9H6X5 657 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms