RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 NALCNQ8IZF0 1738 aa16.63■□□□□ 0.25
TRAF3IP1-204ENST00000462122 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
TRAF3IP1-204ENST00000462122 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
TRAF3IP1-204ENST00000462122 PLEKHH1Q9ULM0 1364 aa16.63■□□□□ 0.25
TRAF3IP1-204ENST00000462122 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.62■□□□□ 0.25
TRAF3IP1-204ENST00000462122 POGKQ9P215 609 aa16.62■□□□□ 0.25
TRAF3IP1-204ENST00000462122 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
TRAF3IP1-204ENST00000462122 ARHGEF28Q8N1W1 1705 aaKnown RBP16.6■□□□□ 0.25
TRAF3IP1-204ENST00000462122 MSH5O43196 834 aa16.6■□□□□ 0.25
TRAF3IP1-204ENST00000462122 SLAIN2Q9P270 581 aa16.59■□□□□ 0.25
TRAF3IP1-204ENST00000462122 EIF3AQ14152 1382 aaKnown RBP16.59■□□□□ 0.25
TRAF3IP1-204ENST00000462122 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
TRAF3IP1-204ENST00000462122 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
TRAF3IP1-204ENST00000462122 SCAF1Q9H7N4 1312 aaKnown RBP16.58■□□□□ 0.24
TRAF3IP1-204ENST00000462122 ADGRB2O60241 1585 aa16.57■□□□□ 0.24
TRAF3IP1-204ENST00000462122 SAFB2Q14151 953 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRAF3IP1-204ENST00000462122 MST1RQ04912 1400 aa16.56■□□□□ 0.24
TRAF3IP1-204ENST00000462122 CENPJQ9HC77 1338 aaPredicted RBP16.55■□□□□ 0.24
TRAF3IP1-204ENST00000462122 ILDR1Q86SU0 546 aaPredicted RBP16.54■□□□□ 0.24
TRAF3IP1-204ENST00000462122 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
TRAF3IP1-204ENST00000462122 MINK1Q8N4C8 1332 aaPredicted RBP16.52■□□□□ 0.24
TRAF3IP1-204ENST00000462122 ROBO1Q9Y6N7 1651 aa16.52■□□□□ 0.23
TRAF3IP1-204ENST00000462122 HIRIP3Q9BW71 556 aaPredicted RBP16.51■□□□□ 0.23
TRAF3IP1-204ENST00000462122 FMN2Q9NZ56 1722 aa16.5■□□□□ 0.23
TRAF3IP1-204ENST00000462122 WASLO00401 505 aaPredicted RBP16.5■□□□□ 0.23
TRAF3IP1-204ENST00000462122 ANKARQ7Z5J8 1434 aa16.5■□□□□ 0.23
TRAF3IP1-204ENST00000462122 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
TRAF3IP1-204ENST00000462122 BRINP3Q76B58 766 aa16.49■□□□□ 0.23
TRAF3IP1-204ENST00000462122 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
TRAF3IP1-204ENST00000462122 TULP4Q9NRJ4 1543 aa16.48■□□□□ 0.23
TRAF3IP1-204ENST00000462122 USP47Q96K76 1375 aa16.47■□□□□ 0.23
TRAF3IP1-204ENST00000462122 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
TRAF3IP1-204ENST00000462122 AHDC1Q5TGY3 1603 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 SLC24A1O60721 1099 aa16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 HSPA1LP34931 641 aa16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 ESCO1Q5FWF5 840 aa16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 ORAI2Q96SN7 254 aa16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
TRAF3IP1-204ENST00000462122 ATP7BP35670 1465 aa16.43■□□□□ 0.22
TRAF3IP1-204ENST00000462122 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
TRAF3IP1-204ENST00000462122 NHSL1Q5SYE7 1610 aa16.42■□□□□ 0.22
TRAF3IP1-204ENST00000462122 USP32Q8NFA0 1604 aa16.42■□□□□ 0.22
TRAF3IP1-204ENST00000462122 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
TRAF3IP1-204ENST00000462122 SRPK2P78362 688 aaKnown RBP16.42■□□□□ 0.22
TRAF3IP1-204ENST00000462122 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
TRAF3IP1-204ENST00000462122 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
TRAF3IP1-204ENST00000462122 NPHP3Q7Z494 1330 aa16.41■□□□□ 0.22
TRAF3IP1-204ENST00000462122 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
TRAF3IP1-204ENST00000462122 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP1-204ENST00000462122 PHF8Q9UPP1 1060 aa16.4■□□□□ 0.22
TRAF3IP1-204ENST00000462122 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
TRAF3IP1-204ENST00000462122 COL16A1Q07092 1604 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP1-204ENST00000462122 TESK2Q96S53 571 aa16.39■□□□□ 0.21
TRAF3IP1-204ENST00000462122 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
TRAF3IP1-204ENST00000462122 EIF4G2P78344 907 aaKnown RBP eCLIP16.38■□□□□ 0.216e-9■■■■■ 37.6
TRAF3IP1-204ENST00000462122 CABP2Q9NPB3 220 aa16.38■□□□□ 0.21
TRAF3IP1-204ENST00000462122 SOS2Q07890 1332 aaPredicted RBP16.38■□□□□ 0.21
TRAF3IP1-204ENST00000462122 ATAD2Q6PL18 1390 aa16.38■□□□□ 0.21
TRAF3IP1-204ENST00000462122 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
TRAF3IP1-204ENST00000462122 FOXO3O43524 673 aa16.37■□□□□ 0.21
TRAF3IP1-204ENST00000462122 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
TRAF3IP1-204ENST00000462122 PMFBP1Q8TBY8 1022 aa16.36■□□□□ 0.21
TRAF3IP1-204ENST00000462122 DDX17Q92841 729 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP1-204ENST00000462122 PUS7Q96PZ0 661 aaKnown RBP16.36■□□□□ 0.21
TRAF3IP1-204ENST00000462122 PXDNQ92626 1479 aa16.35■□□□□ 0.21
TRAF3IP1-204ENST00000462122 TMF1P82094 1093 aa16.35■□□□□ 0.21
TRAF3IP1-204ENST00000462122 LRRC59Q96AG4 307 aaKnown RBP16.35■□□□□ 0.21
TRAF3IP1-204ENST00000462122 JCADQ9P266 1359 aa16.35■□□□□ 0.21
TRAF3IP1-204ENST00000462122 PPIP5K1Q6PFW1 1433 aa16.35■□□□□ 0.21
TRAF3IP1-204ENST00000462122 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
TRAF3IP1-204ENST00000462122 NGDNQ8NEJ9 315 aaKnown RBP16.34■□□□□ 0.21
TRAF3IP1-204ENST00000462122 PSME1Q06323 249 aa16.33■□□□□ 0.2
TRAF3IP1-204ENST00000462122 CDCA8Q53HL2 280 aa16.33■□□□□ 0.2
TRAF3IP1-204ENST00000462122 POLR3AO14802 1390 aaPredicted RBP16.33■□□□□ 0.2
TRAF3IP1-204ENST00000462122 HSPA5P11021 654 aaKnown RBP16.32■□□□□ 0.2
TRAF3IP1-204ENST00000462122 KRT28Q7Z3Y7 464 aa16.32■□□□□ 0.2
TRAF3IP1-204ENST00000462122 DISP3Q9P2K9 1392 aa16.31■□□□□ 0.2
TRAF3IP1-204ENST00000462122 SBNO1A3KN83 1393 aa16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 ACEP12821 1306 aa16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 ZEB1P37275 1124 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
TRAF3IP1-204ENST00000462122 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
TRAF3IP1-204ENST00000462122 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
TRAF3IP1-204ENST00000462122 BRD4O60885 1362 aaPredicted RBP16.28■□□□□ 0.2
TRAF3IP1-204ENST00000462122 PNPLA6Q8IY17 1366 aa16.28■□□□□ 0.2
TRAF3IP1-204ENST00000462122 SPATA31A3Q5VYP0 1347 aa16.28■□□□□ 0.2
TRAF3IP1-204ENST00000462122 ADRA2BP18089 450 aa16.27■□□□□ 0.2
TRAF3IP1-204ENST00000462122 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
TRAF3IP1-204ENST00000462122 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
TRAF3IP1-204ENST00000462122 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
TRAF3IP1-204ENST00000462122 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
TRAF3IP1-204ENST00000462122 USP6P35125 1406 aa16.25■□□□□ 0.19
TRAF3IP1-204ENST00000462122 CPSF1Q10570 1443 aaKnown RBP16.25■□□□□ 0.19
TRAF3IP1-204ENST00000462122 COL22A1Q8NFW1 1626 aaPredicted RBP16.24■□□□□ 0.19
TRAF3IP1-204ENST00000462122 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
TRAF3IP1-204ENST00000462122 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms