RNA–Protein interactions for RNA: ENST00000462051.5

NR1H3-216, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-216ENST00000462051 ESCO1Q5FWF5 840 aa29.85■■■□□ 2.37
NR1H3-216ENST00000462051 TRPC5Q9UL62 973 aaPredicted RBP29.83■■■□□ 2.37
NR1H3-216ENST00000462051 ADGRF5Q8IZF2 1346 aa29.82■■■□□ 2.36
NR1H3-216ENST00000462051 NPHP3Q7Z494 1330 aa29.81■■■□□ 2.36
NR1H3-216ENST00000462051 RGL3Q3MIN7 710 aa29.8■■■□□ 2.36
NR1H3-216ENST00000462051 FOXO3O43524 673 aa29.79■■■□□ 2.36
NR1H3-216ENST00000462051 STK26Q9P289 416 aa29.79■■■□□ 2.36
NR1H3-216ENST00000462051 COL22A1Q8NFW1 1626 aaPredicted RBP29.78■■■□□ 2.36
NR1H3-216ENST00000462051 WAPLQ7Z5K2 1190 aa29.78■■■□□ 2.36
NR1H3-216ENST00000462051 XPCQ01831 940 aaPredicted RBP29.75■■■□□ 2.35
NR1H3-216ENST00000462051 CDC42BPGQ6DT37 1551 aa29.75■■■□□ 2.35
NR1H3-216ENST00000462051 ATAD2Q6PL18 1390 aa29.75■■■□□ 2.35
NR1H3-216ENST00000462051 PXDNQ92626 1479 aa29.74■■■□□ 2.35
NR1H3-216ENST00000462051 ATRNO75882 1429 aa29.74■■■□□ 2.35
NR1H3-216ENST00000462051 NUTM2FA1L443 756 aa29.74■■■□□ 2.35
NR1H3-216ENST00000462051 MYOM2P54296 1465 aa29.74■■■□□ 2.35
NR1H3-216ENST00000462051 CCDC144AA2RUR9 1427 aa29.73■■■□□ 2.35
NR1H3-216ENST00000462051 TMEM132EQ6IEE7 984 aa29.73■■■□□ 2.35
NR1H3-216ENST00000462051 SPATA31E1Q6ZUB1 1445 aa29.71■■■□□ 2.35
NR1H3-216ENST00000462051 MPHOSPH9Q99550 1183 aa29.71■■■□□ 2.35
NR1H3-216ENST00000462051 LRPPRCP42704 1394 aaKnown RBP29.71■■■□□ 2.35
NR1H3-216ENST00000462051 ABCC11Q96J66 1382 aa29.71■■■□□ 2.35
NR1H3-216ENST00000462051 ANKRD30BQ9BXX2 1392 aa29.71■■■□□ 2.35
NR1H3-216ENST00000462051 TECPR2O15040 1411 aa29.71■■■□□ 2.35
NR1H3-216ENST00000462051 BCL9LQ86UU0 1499 aa29.7■■■□□ 2.35
NR1H3-216ENST00000462051 PLEKHH1Q9ULM0 1364 aa29.67■■■□□ 2.34
NR1H3-216ENST00000462051 MARF1Q9Y4F3 1742 aaKnown RBP29.66■■■□□ 2.34
NR1H3-216ENST00000462051 GJD4Q96KN9 370 aaPredicted RBP29.65■■■□□ 2.34
NR1H3-216ENST00000462051 IFT172Q9UG01 1749 aa29.65■■■□□ 2.34
NR1H3-216ENST00000462051 SIRT1Q96EB6 747 aa29.62■■■□□ 2.33
NR1H3-216ENST00000462051 SPATA31A3Q5VYP0 1347 aa29.62■■■□□ 2.33
NR1H3-216ENST00000462051 PIK3C2GO75747 1445 aa29.62■■■□□ 2.33
NR1H3-216ENST00000462051 KNDC1Q76NI1 1749 aa29.6■■■□□ 2.33
NR1H3-216ENST00000462051 KRT28Q7Z3Y7 464 aa29.6■■■□□ 2.33
NR1H3-216ENST00000462051 CCDC125Q86Z20 511 aa29.6■■■□□ 2.33
NR1H3-216ENST00000462051 YTHDC2Q9H6S0 1430 aaKnown RBP29.6■■■□□ 2.33
NR1H3-216ENST00000462051 UNC5CLQ8IV45 518 aa29.58■■■□□ 2.33
NR1H3-216ENST00000462051 C14orf93Q9H972 538 aaKnown RBP29.58■■■□□ 2.33
NR1H3-216ENST00000462051 FMN2Q9NZ56 1722 aa29.58■■■□□ 2.33
NR1H3-216ENST00000462051 ZRANB1Q9UGI0 708 aa29.56■■■□□ 2.32
NR1H3-216ENST00000462051 PHF8Q9UPP1 1060 aa29.53■■■□□ 2.32
NR1H3-216ENST00000462051 SLIT2O94813 1529 aa29.53■■■□□ 2.32
NR1H3-216ENST00000462051 KIF1AQ12756 1690 aa29.53■■■□□ 2.32
NR1H3-216ENST00000462051 RGPD8O14715 1765 aaPredicted RBP29.52■■■□□ 2.32
NR1H3-216ENST00000462051 CFAP70Q5T0N1 1121 aa29.52■■■□□ 2.32
NR1H3-216ENST00000462051 EP400Q96L91 3159 aa29.52■■■□□ 2.32
NR1H3-216ENST00000462051 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.51■■■□□ 2.32
NR1H3-216ENST00000462051 PSME1Q06323 249 aa29.51■■■□□ 2.31
NR1H3-216ENST00000462051 DHX57Q6P158 1386 aaKnown RBP29.51■■■□□ 2.31
NR1H3-216ENST00000462051 RALGAPBQ86X10 1494 aa29.49■■■□□ 2.31
NR1H3-216ENST00000462051 CABLES1Q8TDN4 633 aa29.48■■■□□ 2.31
NR1H3-216ENST00000462051 HAP1P54257 671 aaPredicted RBP29.47■■■□□ 2.31
NR1H3-216ENST00000462051 SRCAPQ6ZRS2 3230 aa29.47■■■□□ 2.31
NR1H3-216ENST00000462051 GLI3P10071 1580 aa29.47■■■□□ 2.31
NR1H3-216ENST00000462051 ACIN1Q9UKV3 1341 aaKnown RBP29.46■■■□□ 2.31
NR1H3-216ENST00000462051 SAFB2Q14151 953 aaKnown RBP eCLIP29.46■■■□□ 2.31
NR1H3-216ENST00000462051 PRAM1Q96QH2 718 aa29.46■■■□□ 2.31
NR1H3-216ENST00000462051 NRXN1Q9ULB1 1477 aa29.45■■■□□ 2.31
NR1H3-216ENST00000462051 USP32Q8NFA0 1604 aa29.45■■■□□ 2.3
NR1H3-216ENST00000462051 TNS3Q68CZ2 1445 aa29.45■■■□□ 2.3
NR1H3-216ENST00000462051 PLEKHG5O94827 1062 aa29.43■■■□□ 2.3
NR1H3-216ENST00000462051 SBNO1A3KN83 1393 aa29.42■■■□□ 2.3
NR1H3-216ENST00000462051 VPS72Q15906 364 aa29.42■■■□□ 2.3
NR1H3-216ENST00000462051 LMOD2Q6P5Q4 547 aa29.42■■■□□ 2.3
NR1H3-216ENST00000462051 BRWD3Q6RI45 1802 aa29.41■■■□□ 2.3
NR1H3-216ENST00000462051 SEPT12Q8IYM1 358 aa29.41■■■□□ 2.3
NR1H3-216ENST00000462051 ONECUT3O60422 494 aaPredicted RBP29.4■■■□□ 2.3
NR1H3-216ENST00000462051 POGKQ9P215 609 aa29.4■■■□□ 2.3
NR1H3-216ENST00000462051 BLMP54132 1417 aaPredicted RBP29.39■■■□□ 2.3
NR1H3-216ENST00000462051 PMFBP1Q8TBY8 1022 aa29.39■■■□□ 2.3
NR1H3-216ENST00000462051 FAM83GA6ND36 823 aa29.38■■■□□ 2.29
NR1H3-216ENST00000462051 ARHGEF10O15013 1369 aa29.37■■■□□ 2.29
NR1H3-216ENST00000462051 CCDC9Q9Y3X0 531 aaKnown RBP29.36■■■□□ 2.29
NR1H3-216ENST00000462051 DEFB132Q7Z7B7 95 aa29.34■■■□□ 2.29
NR1H3-216ENST00000462051 NWD2Q9ULI1 1742 aa29.34■■■□□ 2.29
NR1H3-216ENST00000462051 DLC1Q96QB1 1528 aa29.33■■■□□ 2.29
NR1H3-216ENST00000462051 PLCH1Q4KWH8 1693 aa29.32■■■□□ 2.28
NR1H3-216ENST00000462051 ANKARQ7Z5J8 1434 aa29.32■■■□□ 2.28
NR1H3-216ENST00000462051 SF3B2Q13435 895 aaKnown RBP29.32■■■□□ 2.28
NR1H3-216ENST00000462051 TRAK1Q9UPV9 953 aa29.32■■■□□ 2.28
NR1H3-216ENST00000462051 KRT27Q7Z3Y8 459 aa29.31■■■□□ 2.28
NR1H3-216ENST00000462051 HIRIP3Q9BW71 556 aaPredicted RBP29.3■■■□□ 2.28
NR1H3-216ENST00000462051 ABCA3Q99758 1704 aa29.3■■■□□ 2.28
NR1H3-216ENST00000462051 KDM2AQ9Y2K7 1162 aa29.27■■■□□ 2.28
NR1H3-216ENST00000462051 ADGRB1O14514 1584 aa29.26■■■□□ 2.28
NR1H3-216ENST00000462051 MINK1Q8N4C8 1332 aaPredicted RBP29.26■■■□□ 2.27
NR1H3-216ENST00000462051 RAB3GAP2Q9H2M9 1393 aa29.26■■■□□ 2.27
NR1H3-216ENST00000462051 BTG4Q9NY30 223 aa29.25■■■□□ 2.27
NR1H3-216ENST00000462051 ADGRB2O60241 1585 aa29.25■■■□□ 2.27
NR1H3-216ENST00000462051 PRR36Q9H6K5 1346 aa29.24■■■□□ 2.27
NR1H3-216ENST00000462051 DCAF11Q8TEB1 546 aa29.24■■■□□ 2.27
NR1H3-216ENST00000462051 GPRASP1Q5JY77 1395 aa29.24■■■□□ 2.27
NR1H3-216ENST00000462051 TRPM3Q9HCF6 1732 aaPredicted RBP29.23■■■□□ 2.27
NR1H3-216ENST00000462051 WASLO00401 505 aaPredicted RBP29.22■■■□□ 2.27
NR1H3-216ENST00000462051 FAM98CQ17RN3 349 aaKnown RBP29.22■■■□□ 2.27
NR1H3-216ENST00000462051 A0A0G2JS52 829 aa29.21■■■□□ 2.27
NR1H3-216ENST00000462051 MYT1Q01538 1121 aa29.21■■■□□ 2.27
NR1H3-216ENST00000462051 ALS2Q96Q42 1657 aa29.19■■■□□ 2.26
NR1H3-216ENST00000462051 EIF3AQ14152 1382 aaKnown RBP29.19■■■□□ 2.26
NR1H3-216ENST00000462051 NRAPQ86VF7 1730 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms