RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 PRAM1Q96QH2 718 aa14.7□□□□□ -0.06
SPTAN1-204ENST00000461855 COL16A1Q07092 1604 aaPredicted RBP14.69□□□□□ -0.06
SPTAN1-204ENST00000461855 NEUROD1Q13562 356 aa14.68□□□□□ -0.06
SPTAN1-204ENST00000461855 NBPF1Q3BBV0 1214 aa14.68□□□□□ -0.06
SPTAN1-204ENST00000461855 TRAK1Q9UPV9 953 aa14.68□□□□□ -0.06
SPTAN1-204ENST00000461855 ORAI2Q96SN7 254 aa14.67□□□□□ -0.06
SPTAN1-204ENST00000461855 JCADQ9P266 1359 aa14.66□□□□□ -0.06
SPTAN1-204ENST00000461855 PHLPP1O60346 1717 aa14.66□□□□□ -0.06
SPTAN1-204ENST00000461855 NHSL1Q5SYE7 1610 aa14.66□□□□□ -0.06
SPTAN1-204ENST00000461855 ADGRB2O60241 1585 aa14.65□□□□□ -0.06
SPTAN1-204ENST00000461855 POGKQ9P215 609 aa14.65□□□□□ -0.06
SPTAN1-204ENST00000461855 SOS2Q07890 1332 aaPredicted RBP14.65□□□□□ -0.06
SPTAN1-204ENST00000461855 MED1Q15648 1581 aaPredicted RBP14.64□□□□□ -0.07
SPTAN1-204ENST00000461855 PCGF6Q9BYE7 350 aa14.64□□□□□ -0.07
SPTAN1-204ENST00000461855 FMN2Q9NZ56 1722 aa14.63□□□□□ -0.07
SPTAN1-204ENST00000461855 NBPF8Q3BBV2 869 aa14.63□□□□□ -0.07
SPTAN1-204ENST00000461855 CLSPNQ9HAW4 1339 aa14.63□□□□□ -0.07
SPTAN1-204ENST00000461855 GPRASP1Q5JY77 1395 aa14.62□□□□□ -0.07
SPTAN1-204ENST00000461855 DISP3Q9P2K9 1392 aa14.62□□□□□ -0.07
SPTAN1-204ENST00000461855 ANKARQ7Z5J8 1434 aa14.62□□□□□ -0.07
SPTAN1-204ENST00000461855 ARHGEF28Q8N1W1 1705 aaKnown RBP14.62□□□□□ -0.07
SPTAN1-204ENST00000461855 LRRC59Q96AG4 307 aaKnown RBP14.62□□□□□ -0.07
SPTAN1-204ENST00000461855 SAFB2Q14151 953 aaKnown RBP eCLIP14.61□□□□□ -0.07
SPTAN1-204ENST00000461855 ESCO1Q5FWF5 840 aa14.61□□□□□ -0.07
SPTAN1-204ENST00000461855 DDX17Q92841 729 aaKnown RBP14.61□□□□□ -0.07
SPTAN1-204ENST00000461855 SPATA31A6Q5VVP1 1343 aa14.61□□□□□ -0.07
SPTAN1-204ENST00000461855 TRPM1Q7Z4N2 1603 aa14.6□□□□□ -0.07
SPTAN1-204ENST00000461855 WASLO00401 505 aaPredicted RBP14.6□□□□□ -0.07
SPTAN1-204ENST00000461855 TONSLQ96HA7 1378 aa14.6□□□□□ -0.07
SPTAN1-204ENST00000461855 SHPRHQ149N8 1683 aa14.59□□□□□ -0.07
SPTAN1-204ENST00000461855 NPHP3Q7Z494 1330 aa14.59□□□□□ -0.07
SPTAN1-204ENST00000461855 MINK1Q8N4C8 1332 aaPredicted RBP14.59□□□□□ -0.07
SPTAN1-204ENST00000461855 PXDNQ92626 1479 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 NUTM2FA1L443 756 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 FOXO3O43524 673 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 PRR36Q9H6K5 1346 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 USP32Q8NFA0 1604 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 EIF3AQ14152 1382 aaKnown RBP14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 PNPLA6Q8IY17 1366 aa14.58□□□□□ -0.08
SPTAN1-204ENST00000461855 HIRIP3Q9BW71 556 aaPredicted RBP14.57□□□□□ -0.08
SPTAN1-204ENST00000461855 TULP4Q9NRJ4 1543 aa14.56□□□□□ -0.08
SPTAN1-204ENST00000461855 RGS17Q9UGC6 210 aaPredicted RBP14.56□□□□□ -0.08
SPTAN1-204ENST00000461855 PHF8Q9UPP1 1060 aa14.56□□□□□ -0.08
SPTAN1-204ENST00000461855 CENPJQ9HC77 1338 aaPredicted RBP14.56□□□□□ -0.08
SPTAN1-204ENST00000461855 ROCK2O75116 1388 aaKnown RBP14.56□□□□□ -0.08
SPTAN1-204ENST00000461855 LRP6O75581 1613 aa14.55□□□□□ -0.08
SPTAN1-204ENST00000461855 KIF1AQ12756 1690 aa14.55□□□□□ -0.08
SPTAN1-204ENST00000461855 CDK19Q9BWU1 502 aa14.54□□□□□ -0.08
SPTAN1-204ENST00000461855 RALGAPBQ86X10 1494 aa14.54□□□□□ -0.08
SPTAN1-204ENST00000461855 ATP7BP35670 1465 aa14.53□□□□□ -0.08
SPTAN1-204ENST00000461855 ILDR2Q71H61 639 aa14.53□□□□□ -0.08
SPTAN1-204ENST00000461855 RGPD8O14715 1765 aaPredicted RBP14.52□□□□□ -0.08
SPTAN1-204ENST00000461855 SPATA31A3Q5VYP0 1347 aa14.52□□□□□ -0.08
SPTAN1-204ENST00000461855 KRT28Q7Z3Y7 464 aa14.52□□□□□ -0.09
SPTAN1-204ENST00000461855 NUDT16Q96DE0 195 aaKnown RBP14.52□□□□□ -0.09
SPTAN1-204ENST00000461855 COL22A1Q8NFW1 1626 aaPredicted RBP14.52□□□□□ -0.09
SPTAN1-204ENST00000461855 SBNO1A3KN83 1393 aa14.51□□□□□ -0.09
SPTAN1-204ENST00000461855 SBNO2Q9Y2G9 1366 aa14.51□□□□□ -0.09
SPTAN1-204ENST00000461855 PLEKHG3A1L390 1219 aa14.51□□□□□ -0.09
SPTAN1-204ENST00000461855 CCDC61Q9Y6R9 512 aa14.51□□□□□ -0.09
SPTAN1-204ENST00000461855 PMFBP1Q8TBY8 1022 aa14.5□□□□□ -0.09
SPTAN1-204ENST00000461855 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
SPTAN1-204ENST00000461855 PSME1Q06323 249 aa14.49□□□□□ -0.09
SPTAN1-204ENST00000461855 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
SPTAN1-204ENST00000461855 CARD11Q9BXL7 1154 aa14.49□□□□□ -0.09
SPTAN1-204ENST00000461855 POLR3AO14802 1390 aaPredicted RBP14.48□□□□□ -0.09
SPTAN1-204ENST00000461855 QRICH2Q9H0J4 1663 aa14.47□□□□□ -0.09
SPTAN1-204ENST00000461855 TOPAZ1Q8N9V7 1692 aa14.46□□□□□ -0.09
SPTAN1-204ENST00000461855 POTEAQ6S8J7 498 aa14.46□□□□□ -0.09
SPTAN1-204ENST00000461855 TNS3Q68CZ2 1445 aa14.46□□□□□ -0.09
SPTAN1-204ENST00000461855 EVC2Q86UK5 1308 aa14.45□□□□□ -0.1
SPTAN1-204ENST00000461855 NUTM2BA6NNL0 878 aaPredicted RBP14.45□□□□□ -0.1
SPTAN1-204ENST00000461855 NUTM2EB1AL46 878 aaPredicted RBP14.45□□□□□ -0.1
SPTAN1-204ENST00000461855 NUTM2AQ8IVF1 878 aaPredicted RBP14.45□□□□□ -0.1
SPTAN1-204ENST00000461855 TRPM3Q9HCF6 1732 aaPredicted RBP14.45□□□□□ -0.1
SPTAN1-204ENST00000461855 CABP2Q9NPB3 220 aa14.45□□□□□ -0.1
SPTAN1-204ENST00000461855 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
SPTAN1-204ENST00000461855 SRPK2P78362 688 aaKnown RBP14.44□□□□□ -0.1
SPTAN1-204ENST00000461855 ARHGEF10O15013 1369 aa14.44□□□□□ -0.1
SPTAN1-204ENST00000461855 ACEP12821 1306 aa14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 ZNF772Q68DY9 489 aaPredicted RBP14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 FNBP4Q8N3X1 1017 aaPredicted RBP14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 NGDNQ8NEJ9 315 aaKnown RBP14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 CCER1Q8TC90 406 aaPredicted RBP14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 PUS7Q96PZ0 661 aaKnown RBP14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 TESK2Q96S53 571 aa14.43□□□□□ -0.1
SPTAN1-204ENST00000461855 MEX3CQ5U5Q3 659 aaKnown RBP14.42□□□□□ -0.1
SPTAN1-204ENST00000461855 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
SPTAN1-204ENST00000461855 CABP1Q9NZU7 370 aa14.41□□□□□ -0.1
SPTAN1-204ENST00000461855 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
SPTAN1-204ENST00000461855 ALS2Q96Q42 1657 aa14.41□□□□□ -0.1
SPTAN1-204ENST00000461855 AFF2P51816 1311 aa14.41□□□□□ -0.1
SPTAN1-204ENST00000461855 SLC24A1O60721 1099 aa14.4□□□□□ -0.1
SPTAN1-204ENST00000461855 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
SPTAN1-204ENST00000461855 ATAD2Q6PL18 1390 aa14.39□□□□□ -0.11
SPTAN1-204ENST00000461855 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
SPTAN1-204ENST00000461855 ADAMTS2O95450 1211 aa14.39□□□□□ -0.11
SPTAN1-204ENST00000461855 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
SPTAN1-204ENST00000461855 SOCS7O14512 581 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms