RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 DDX17Q92841 729 aaKnown RBP20.16■□□□□ 0.82
RBM39-222ENST00000461849 TECPR2O15040 1411 aa20.16■□□□□ 0.82
RBM39-222ENST00000461849 ORAI2Q96SN7 254 aa20.15■□□□□ 0.82
RBM39-222ENST00000461849 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
RBM39-222ENST00000461849 YTHDC2Q9H6S0 1430 aaKnown RBP20.15■□□□□ 0.82
RBM39-222ENST00000461849 CFAP70Q5T0N1 1121 aa20.14■□□□□ 0.81
RBM39-222ENST00000461849 POTEAQ6S8J7 498 aa20.14■□□□□ 0.81
RBM39-222ENST00000461849 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
RBM39-222ENST00000461849 LRP6O75581 1613 aa20.13■□□□□ 0.81
RBM39-222ENST00000461849 LAMC1P11047 1609 aa20.13■□□□□ 0.81
RBM39-222ENST00000461849 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
RBM39-222ENST00000461849 ESCO1Q5FWF5 840 aa20.13■□□□□ 0.81
RBM39-222ENST00000461849 CDC42BPGQ6DT37 1551 aa20.12■□□□□ 0.81
RBM39-222ENST00000461849 ZNF772Q68DY9 489 aaPredicted RBP20.12■□□□□ 0.81
RBM39-222ENST00000461849 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
RBM39-222ENST00000461849 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
RBM39-222ENST00000461849 SIRT1Q96EB6 747 aa20.11■□□□□ 0.81
RBM39-222ENST00000461849 PLEKHH1Q9ULM0 1364 aa20.1■□□□□ 0.81
RBM39-222ENST00000461849 NUTM2FA1L443 756 aa20.1■□□□□ 0.81
RBM39-222ENST00000461849 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
RBM39-222ENST00000461849 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.81
RBM39-222ENST00000461849 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.81
RBM39-222ENST00000461849 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.8
RBM39-222ENST00000461849 POGKQ9P215 609 aa20.07■□□□□ 0.8
RBM39-222ENST00000461849 SAFB2Q14151 953 aaKnown RBP eCLIP20.05■□□□□ 0.8
RBM39-222ENST00000461849 PRAM1Q96QH2 718 aa20.05■□□□□ 0.8
RBM39-222ENST00000461849 FOXO3O43524 673 aa20.04■□□□□ 0.8
RBM39-222ENST00000461849 C8orf37Q96NL8 207 aa20.04■□□□□ 0.8
RBM39-222ENST00000461849 TRAK1Q9UPV9 953 aa20.02■□□□□ 0.8
RBM39-222ENST00000461849 AFF2P51816 1311 aa20.02■□□□□ 0.79
RBM39-222ENST00000461849 ADAMTS2O95450 1211 aa20.01■□□□□ 0.79
RBM39-222ENST00000461849 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
RBM39-222ENST00000461849 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
RBM39-222ENST00000461849 XPCQ01831 940 aaPredicted RBP20■□□□□ 0.79
RBM39-222ENST00000461849 RXRBP28702 533 aa19.99■□□□□ 0.79
RBM39-222ENST00000461849 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
RBM39-222ENST00000461849 ADGRB1O14514 1584 aa19.99■□□□□ 0.79
RBM39-222ENST00000461849 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
RBM39-222ENST00000461849 PXDNQ92626 1479 aa19.97■□□□□ 0.79
RBM39-222ENST00000461849 PHF8Q9UPP1 1060 aa19.96■□□□□ 0.79
RBM39-222ENST00000461849 PSME1Q06323 249 aa19.94■□□□□ 0.78
RBM39-222ENST00000461849 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
RBM39-222ENST00000461849 HIRIP3Q9BW71 556 aaPredicted RBP19.94■□□□□ 0.78
RBM39-222ENST00000461849 QTRT2Q9H974 415 aaKnown RBP19.94■□□□□ 0.78
RBM39-222ENST00000461849 COL22A1Q8NFW1 1626 aaPredicted RBP19.94■□□□□ 0.78
RBM39-222ENST00000461849 MINK1Q8N4C8 1332 aaPredicted RBP19.93■□□□□ 0.78
RBM39-222ENST00000461849 CLSPNQ9HAW4 1339 aa19.93■□□□□ 0.78
RBM39-222ENST00000461849 RGPD8O14715 1765 aaPredicted RBP19.92■□□□□ 0.78
RBM39-222ENST00000461849 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
RBM39-222ENST00000461849 USP21Q9UK80 565 aa19.91■□□□□ 0.78
RBM39-222ENST00000461849 ANKARQ7Z5J8 1434 aa19.91■□□□□ 0.78
RBM39-222ENST00000461849 ADGRB2O60241 1585 aa19.91■□□□□ 0.78
RBM39-222ENST00000461849 RBM6P78332 1123 aaKnown RBP19.9■□□□□ 0.78
RBM39-222ENST00000461849 PMFBP1Q8TBY8 1022 aa19.9■□□□□ 0.78
RBM39-222ENST00000461849 SPATA31A3Q5VYP0 1347 aa19.9■□□□□ 0.78
RBM39-222ENST00000461849 WASLO00401 505 aaPredicted RBP19.89■□□□□ 0.77
RBM39-222ENST00000461849 HAP1P54257 671 aaPredicted RBP19.89■□□□□ 0.77
RBM39-222ENST00000461849 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
RBM39-222ENST00000461849 FNBP4Q8N3X1 1017 aaPredicted RBP19.87■□□□□ 0.77
RBM39-222ENST00000461849 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
RBM39-222ENST00000461849 CDK12Q9NYV4 1490 aaPredicted RBP19.86■□□□□ 0.77
RBM39-222ENST00000461849 TNS3Q68CZ2 1445 aa19.85■□□□□ 0.77
RBM39-222ENST00000461849 ARHGEF28Q8N1W1 1705 aaKnown RBP19.85■□□□□ 0.77
RBM39-222ENST00000461849 KIAA1210Q9ULL0 1709 aa19.85■□□□□ 0.77
RBM39-222ENST00000461849 CCER1Q8TC90 406 aaPredicted RBP19.85■□□□□ 0.77
RBM39-222ENST00000461849 TULP4Q9NRJ4 1543 aa19.85■□□□□ 0.77
RBM39-222ENST00000461849 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
RBM39-222ENST00000461849 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
RBM39-222ENST00000461849 PLEKHG5O94827 1062 aa19.84■□□□□ 0.77
RBM39-222ENST00000461849 GPRASP1Q5JY77 1395 aa19.83■□□□□ 0.77
RBM39-222ENST00000461849 NEUROD1Q13562 356 aa19.83■□□□□ 0.77
RBM39-222ENST00000461849 ARHGEF10O15013 1369 aa19.83■□□□□ 0.76
RBM39-222ENST00000461849 MARF1Q9Y4F3 1742 aaKnown RBP19.82■□□□□ 0.76
RBM39-222ENST00000461849 NBPF1Q3BBV0 1214 aa19.82■□□□□ 0.76
RBM39-222ENST00000461849 NGDNQ8NEJ9 315 aaKnown RBP19.82■□□□□ 0.76
RBM39-222ENST00000461849 SIN3AQ96ST3 1273 aa19.82■□□□□ 0.76
RBM39-222ENST00000461849 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
RBM39-222ENST00000461849 L3MBTL2Q969R5 705 aa19.81■□□□□ 0.76
RBM39-222ENST00000461849 RGS12O14924 1447 aa19.79■□□□□ 0.76
RBM39-222ENST00000461849 CABLES1Q8TDN4 633 aa19.79■□□□□ 0.76
RBM39-222ENST00000461849 NUDT16Q96DE0 195 aaKnown RBP19.79■□□□□ 0.76
RBM39-222ENST00000461849 CDK19Q9BWU1 502 aa19.79■□□□□ 0.76
RBM39-222ENST00000461849 ATRNO75882 1429 aa19.78■□□□□ 0.76
RBM39-222ENST00000461849 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
RBM39-222ENST00000461849 UPF1Q92900 1129 aaKnown RBP eCLIP19.78■□□□□ 0.76
RBM39-222ENST00000461849 BCL9LQ86UU0 1499 aa19.77■□□□□ 0.76
RBM39-222ENST00000461849 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
RBM39-222ENST00000461849 UNC5CLQ8IV45 518 aa19.76■□□□□ 0.75
RBM39-222ENST00000461849 CENPJQ9HC77 1338 aaPredicted RBP19.76■□□□□ 0.75
RBM39-222ENST00000461849 ATP7BP35670 1465 aa19.75■□□□□ 0.75
RBM39-222ENST00000461849 GJD4Q96KN9 370 aaPredicted RBP19.74■□□□□ 0.75
RBM39-222ENST00000461849 CCDC61Q9Y6R9 512 aa19.74■□□□□ 0.75
RBM39-222ENST00000461849 SLIT2O94813 1529 aa19.73■□□□□ 0.75
RBM39-222ENST00000461849 SRPK2P78362 688 aaKnown RBP19.73■□□□□ 0.75
RBM39-222ENST00000461849 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
RBM39-222ENST00000461849 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.71■□□□□ 0.75
RBM39-222ENST00000461849 ROCK2O75116 1388 aaKnown RBP19.7■□□□□ 0.74
RBM39-222ENST00000461849 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
RBM39-222ENST00000461849 CCDC9Q9Y3X0 531 aaKnown RBP19.7■□□□□ 0.74
RBM39-222ENST00000461849 ATAD2Q6PL18 1390 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms