RNA–Protein interactions for RNA: ENST00000461762.5

C9orf78-204, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-204ENST00000461762 DAXXQ9UER7 740 aaPredicted RBP19.5■□□□□ 0.71
C9orf78-204ENST00000461762 PANK1Q8TE04 598 aa19.49■□□□□ 0.71
C9orf78-204ENST00000461762 MLH3Q9UHC1 1453 aa19.49■□□□□ 0.71
C9orf78-204ENST00000461762 NPATQ14207 1427 aa19.49■□□□□ 0.71
C9orf78-204ENST00000461762 RPGRIP1LQ68CZ1 1315 aa19.49■□□□□ 0.71
C9orf78-204ENST00000461762 SHPRHQ149N8 1683 aa19.48■□□□□ 0.71
C9orf78-204ENST00000461762 POGZQ7Z3K3 1410 aa19.48■□□□□ 0.71
C9orf78-204ENST00000461762 RARSP54136 660 aaKnown RBP19.48■□□□□ 0.71
C9orf78-204ENST00000461762 WDR63Q8IWG1 891 aa19.48■□□□□ 0.71
C9orf78-204ENST00000461762 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
C9orf78-204ENST00000461762 COG6Q9Y2V7 657 aa19.48■□□□□ 0.71
C9orf78-204ENST00000461762 IQSEC2Q5JU85 1478 aa19.48■□□□□ 0.71
C9orf78-204ENST00000461762 CHGAP10645 457 aaKnown RBP19.48■□□□□ 0.71
C9orf78-204ENST00000461762 PUS7Q96PZ0 661 aaKnown RBP19.47■□□□□ 0.71
C9orf78-204ENST00000461762 AAMPQ13685 434 aa19.47■□□□□ 0.71
C9orf78-204ENST00000461762 CCDC27Q2M243 656 aa19.47■□□□□ 0.71
C9orf78-204ENST00000461762 USP19O94966 1318 aa19.46■□□□□ 0.71
C9orf78-204ENST00000461762 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
C9orf78-204ENST00000461762 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
C9orf78-204ENST00000461762 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
C9orf78-204ENST00000461762 MAPK8IP3Q9UPT6 1336 aa19.45■□□□□ 0.7
C9orf78-204ENST00000461762 CD109Q6YHK3 1445 aa19.45■□□□□ 0.7
C9orf78-204ENST00000461762 RRP7AQ9Y3A4 280 aaKnown RBP19.45■□□□□ 0.7
C9orf78-204ENST00000461762 CANXP27824 592 aaKnown RBP19.44■□□□□ 0.7
C9orf78-204ENST00000461762 MTHFSP49914 203 aa19.44■□□□□ 0.7
C9orf78-204ENST00000461762 HECW2Q9P2P5 1572 aa19.44■□□□□ 0.7
C9orf78-204ENST00000461762 ZC3H13Q5T200 1668 aaKnown RBP19.44■□□□□ 0.7
C9orf78-204ENST00000461762 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
C9orf78-204ENST00000461762 USP32Q8NFA0 1604 aa19.43■□□□□ 0.7
C9orf78-204ENST00000461762 GSE1Q14687 1217 aa19.43■□□□□ 0.7
C9orf78-204ENST00000461762 OSCARQ8IYS5 282 aa19.43■□□□□ 0.7
C9orf78-204ENST00000461762 PPLO60437 1756 aa19.43■□□□□ 0.7
C9orf78-204ENST00000461762 QRICH2Q9H0J4 1663 aa19.42■□□□□ 0.7
C9orf78-204ENST00000461762 FRAT1Q92837 279 aaPredicted RBP19.42■□□□□ 0.7
C9orf78-204ENST00000461762 FRMPD1Q5SYB0 1578 aa19.42■□□□□ 0.7
C9orf78-204ENST00000461762 CFAP53Q96M91 514 aa19.41■□□□□ 0.7
C9orf78-204ENST00000461762 GGT6Q6P531 493 aa19.41■□□□□ 0.7
C9orf78-204ENST00000461762 RLBP1P12271 317 aa19.4■□□□□ 0.7
C9orf78-204ENST00000461762 PMFBP1Q8TBY8 1022 aa19.4■□□□□ 0.7
C9orf78-204ENST00000461762 NEO1Q92859 1461 aa19.4■□□□□ 0.7
C9orf78-204ENST00000461762 PCDHB15Q9Y5E8 787 aa19.4■□□□□ 0.7
C9orf78-204ENST00000461762 SEC24BO95487 1268 aa19.39■□□□□ 0.69
C9orf78-204ENST00000461762 IL27Q8NEV9 243 aa19.39■□□□□ 0.69
C9orf78-204ENST00000461762 NSD2O96028 1365 aa19.38■□□□□ 0.69
C9orf78-204ENST00000461762 ANKRD36BQ8N2N9 1353 aa19.38■□□□□ 0.69
C9orf78-204ENST00000461762 EVC2Q86UK5 1308 aa19.38■□□□□ 0.69
C9orf78-204ENST00000461762 TNNQ9UQP3 1299 aa19.37■□□□□ 0.69
C9orf78-204ENST00000461762 ZMYM3Q14202 1370 aa19.37■□□□□ 0.69
C9orf78-204ENST00000461762 ABCC3O15438 1527 aa19.36■□□□□ 0.69
C9orf78-204ENST00000461762 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
C9orf78-204ENST00000461762 VGFO15240 615 aaPredicted RBP19.35■□□□□ 0.69
C9orf78-204ENST00000461762 TULP4Q9NRJ4 1543 aa19.35■□□□□ 0.69
C9orf78-204ENST00000461762 FRAT2O75474 233 aaPredicted RBP19.35■□□□□ 0.69
C9orf78-204ENST00000461762 VIRMAQ69YN4 1812 aaKnown RBP19.34■□□□□ 0.69
C9orf78-204ENST00000461762 NLRP1Q9C000 1473 aa19.33■□□□□ 0.69
C9orf78-204ENST00000461762 GLI2P10070 1586 aa19.33■□□□□ 0.69
C9orf78-204ENST00000461762 U2AF1L5P0DN76 240 aaPredicted RBP19.33■□□□□ 0.68
C9orf78-204ENST00000461762 U2AF1Q01081 240 aaKnown RBP eCLIP19.33■□□□□ 0.68
C9orf78-204ENST00000461762 BCL2L13Q9BXK5 485 aa19.33■□□□□ 0.68
C9orf78-204ENST00000461762 RWDD1Q9H446 243 aaPredicted RBP19.32■□□□□ 0.68
C9orf78-204ENST00000461762 PDZRN3Q9UPQ7 1066 aa19.32■□□□□ 0.68
C9orf78-204ENST00000461762 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
C9orf78-204ENST00000461762 CABP2Q9NPB3 220 aa19.31■□□□□ 0.68
C9orf78-204ENST00000461762 NEXMIFQ5QGS0 1516 aa19.3■□□□□ 0.68
C9orf78-204ENST00000461762 CAMSAP1Q5T5Y3 1602 aa19.3■□□□□ 0.68
C9orf78-204ENST00000461762 ADGRB2O60241 1585 aa19.3■□□□□ 0.68
C9orf78-204ENST00000461762 MVPQ14764 893 aaKnown RBP19.3■□□□□ 0.68
C9orf78-204ENST00000461762 PLEKHF1Q96S99 279 aa19.3■□□□□ 0.68
C9orf78-204ENST00000461762 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
C9orf78-204ENST00000461762 NUTM2DQ5VT03 806 aaPredicted RBP19.29■□□□□ 0.68
C9orf78-204ENST00000461762 CFAP65Q6ZU64 1925 aaKnown RBP19.29■□□□□ 0.68
C9orf78-204ENST00000461762 ARHGEF28Q8N1W1 1705 aaKnown RBP19.28■□□□□ 0.68
C9orf78-204ENST00000461762 BECN1Q14457 450 aa19.28■□□□□ 0.68
C9orf78-204ENST00000461762 ZKSCAN2Q63HK3 967 aa19.28■□□□□ 0.68
C9orf78-204ENST00000461762 ABCC11Q96J66 1382 aa19.28■□□□□ 0.68
C9orf78-204ENST00000461762 SIGLEC1Q9BZZ2 1709 aa19.28■□□□□ 0.68
C9orf78-204ENST00000461762 ZFYVE9O95405 1425 aa19.28■□□□□ 0.68
C9orf78-204ENST00000461762 ARHGAP31Q2M1Z3 1444 aa19.28■□□□□ 0.68
C9orf78-204ENST00000461762 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.68
C9orf78-204ENST00000461762 TBC1D32Q96NH3 1257 aa19.27■□□□□ 0.67
C9orf78-204ENST00000461762 DZIP1LQ8IYY4 767 aaKnown RBP19.26■□□□□ 0.67
C9orf78-204ENST00000461762 A0A1W2PP64 1363 aa19.26■□□□□ 0.67
C9orf78-204ENST00000461762 IDI1Q13907 227 aa19.26■□□□□ 0.67
C9orf78-204ENST00000461762 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
C9orf78-204ENST00000461762 TMPOP42166 694 aaKnown RBP19.25■□□□□ 0.67
C9orf78-204ENST00000461762 BRPF3Q9ULD4 1205 aa19.25■□□□□ 0.67
C9orf78-204ENST00000461762 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
C9orf78-204ENST00000461762 ANTXR1Q9H6X2 564 aa19.24■□□□□ 0.67
C9orf78-204ENST00000461762 COL3A1P02461 1466 aaPredicted RBP19.23■□□□□ 0.67
C9orf78-204ENST00000461762 EXOSC9Q06265 439 aaKnown RBP19.23■□□□□ 0.67
C9orf78-204ENST00000461762 UPF2Q9HAU5 1272 aaKnown RBP19.23■□□□□ 0.67
C9orf78-204ENST00000461762 IL16Q14005 1332 aa19.23■□□□□ 0.67
C9orf78-204ENST00000461762 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
C9orf78-204ENST00000461762 FYB1O15117 783 aa19.22■□□□□ 0.67
C9orf78-204ENST00000461762 RAPGEF3O95398 923 aa19.22■□□□□ 0.67
C9orf78-204ENST00000461762 GGNBP2Q9H3C7 697 aa19.22■□□□□ 0.67
C9orf78-204ENST00000461762 SLC52A1Q9NWF4 448 aa19.22■□□□□ 0.67
C9orf78-204ENST00000461762 HDAC1Q13547 482 aaPredicted RBP19.21■□□□□ 0.67
C9orf78-204ENST00000461762 FTSJ3Q8IY81 847 aaKnown RBP19.21■□□□□ 0.67
C9orf78-204ENST00000461762 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms