RNA–Protein interactions for RNA: ENST00000461684.5

CHRD-210, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 677 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-210ENST00000461684 CCDC144AA2RUR9 1427 aa23.78■■□□□ 1.4
CHRD-210ENST00000461684 FOXD1Q16676 465 aa23.78■■□□□ 1.4
CHRD-210ENST00000461684 ESCO1Q5FWF5 840 aa23.78■■□□□ 1.4
CHRD-210ENST00000461684 IFT172Q9UG01 1749 aa23.78■■□□□ 1.4
CHRD-210ENST00000461684 NPHP3Q7Z494 1330 aa23.78■■□□□ 1.4
CHRD-210ENST00000461684 TRPC5Q9UL62 973 aaPredicted RBP23.77■■□□□ 1.4
CHRD-210ENST00000461684 MARF1Q9Y4F3 1742 aaKnown RBP23.76■■□□□ 1.39
CHRD-210ENST00000461684 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
CHRD-210ENST00000461684 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
CHRD-210ENST00000461684 KNDC1Q76NI1 1749 aa23.74■■□□□ 1.39
CHRD-210ENST00000461684 ANKRD30BQ9BXX2 1392 aa23.74■■□□□ 1.39
CHRD-210ENST00000461684 RGL3Q3MIN7 710 aa23.73■■□□□ 1.39
CHRD-210ENST00000461684 TECPR2O15040 1411 aa23.73■■□□□ 1.39
CHRD-210ENST00000461684 STK26Q9P289 416 aa23.72■■□□□ 1.39
CHRD-210ENST00000461684 LRPPRCP42704 1394 aaKnown RBP23.72■■□□□ 1.39
CHRD-210ENST00000461684 ATAD2Q6PL18 1390 aa23.72■■□□□ 1.39
CHRD-210ENST00000461684 SPATA31E1Q6ZUB1 1445 aa23.72■■□□□ 1.39
CHRD-210ENST00000461684 PXDNQ92626 1479 aa23.72■■□□□ 1.39
CHRD-210ENST00000461684 MYOM2P54296 1465 aa23.71■■□□□ 1.39
CHRD-210ENST00000461684 FOXO3O43524 673 aa23.71■■□□□ 1.39
CHRD-210ENST00000461684 WAPLQ7Z5K2 1190 aa23.7■■□□□ 1.38
CHRD-210ENST00000461684 MPHOSPH9Q99550 1183 aa23.7■■□□□ 1.38
CHRD-210ENST00000461684 ATRNO75882 1429 aa23.69■■□□□ 1.38
CHRD-210ENST00000461684 ABCC11Q96J66 1382 aa23.69■■□□□ 1.38
CHRD-210ENST00000461684 FMN2Q9NZ56 1722 aa23.67■■□□□ 1.38
CHRD-210ENST00000461684 NUTM2FA1L443 756 aa23.67■■□□□ 1.38
CHRD-210ENST00000461684 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
CHRD-210ENST00000461684 KIF1AQ12756 1690 aa23.67■■□□□ 1.38
CHRD-210ENST00000461684 TMEM132EQ6IEE7 984 aa23.66■■□□□ 1.38
CHRD-210ENST00000461684 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
CHRD-210ENST00000461684 PLEKHH1Q9ULM0 1364 aa23.64■■□□□ 1.37
CHRD-210ENST00000461684 BCL9LQ86UU0 1499 aa23.63■■□□□ 1.37
CHRD-210ENST00000461684 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.63■■□□□ 1.37
CHRD-210ENST00000461684 YTHDC2Q9H6S0 1430 aaKnown RBP23.63■■□□□ 1.37
CHRD-210ENST00000461684 RGPD8O14715 1765 aaPredicted RBP23.63■■□□□ 1.37
CHRD-210ENST00000461684 SIRT1Q96EB6 747 aa23.61■■□□□ 1.37
CHRD-210ENST00000461684 ACIN1Q9UKV3 1341 aaKnown RBP23.6■■□□□ 1.37
CHRD-210ENST00000461684 GJD4Q96KN9 370 aaPredicted RBP23.59■■□□□ 1.37
CHRD-210ENST00000461684 SPATA31A3Q5VYP0 1347 aa23.59■■□□□ 1.37
CHRD-210ENST00000461684 C14orf93Q9H972 538 aaKnown RBP23.57■■□□□ 1.36
CHRD-210ENST00000461684 KRT28Q7Z3Y7 464 aa23.56■■□□□ 1.36
CHRD-210ENST00000461684 CCDC125Q86Z20 511 aa23.56■■□□□ 1.36
CHRD-210ENST00000461684 DHX57Q6P158 1386 aaKnown RBP23.55■■□□□ 1.36
CHRD-210ENST00000461684 EP400Q96L91 3159 aa23.55■■□□□ 1.36
CHRD-210ENST00000461684 UNC5CLQ8IV45 518 aa23.55■■□□□ 1.36
CHRD-210ENST00000461684 USP32Q8NFA0 1604 aa23.55■■□□□ 1.36
CHRD-210ENST00000461684 NRXN1Q9ULB1 1477 aa23.54■■□□□ 1.36
CHRD-210ENST00000461684 SLIT2O94813 1529 aa23.54■■□□□ 1.36
CHRD-210ENST00000461684 PSME1Q06323 249 aa23.53■■□□□ 1.36
CHRD-210ENST00000461684 PHF8Q9UPP1 1060 aa23.53■■□□□ 1.36
CHRD-210ENST00000461684 GLI3P10071 1580 aa23.52■■□□□ 1.36
CHRD-210ENST00000461684 CFAP70Q5T0N1 1121 aa23.51■■□□□ 1.35
CHRD-210ENST00000461684 ZRANB1Q9UGI0 708 aa23.51■■□□□ 1.35
CHRD-210ENST00000461684 TNS3Q68CZ2 1445 aa23.5■■□□□ 1.35
CHRD-210ENST00000461684 RALGAPBQ86X10 1494 aa23.5■■□□□ 1.35
CHRD-210ENST00000461684 BRWD3Q6RI45 1802 aa23.5■■□□□ 1.35
CHRD-210ENST00000461684 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
CHRD-210ENST00000461684 NWD2Q9ULI1 1742 aa23.48■■□□□ 1.35
CHRD-210ENST00000461684 PRAM1Q96QH2 718 aa23.48■■□□□ 1.35
CHRD-210ENST00000461684 SBNO1A3KN83 1393 aa23.47■■□□□ 1.35
CHRD-210ENST00000461684 PLCH1Q4KWH8 1693 aa23.47■■□□□ 1.35
CHRD-210ENST00000461684 ABCA3Q99758 1704 aa23.47■■□□□ 1.35
CHRD-210ENST00000461684 SAFB2Q14151 953 aaKnown RBP eCLIP23.46■■□□□ 1.35
CHRD-210ENST00000461684 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
CHRD-210ENST00000461684 POGKQ9P215 609 aa23.46■■□□□ 1.35
CHRD-210ENST00000461684 SRCAPQ6ZRS2 3230 aa23.46■■□□□ 1.35
CHRD-210ENST00000461684 ARHGEF10O15013 1369 aa23.44■■□□□ 1.34
CHRD-210ENST00000461684 LMOD2Q6P5Q4 547 aa23.44■■□□□ 1.34
CHRD-210ENST00000461684 CABLES1Q8TDN4 633 aa23.44■■□□□ 1.34
CHRD-210ENST00000461684 ANKARQ7Z5J8 1434 aa23.43■■□□□ 1.34
CHRD-210ENST00000461684 VPS72Q15906 364 aa23.43■■□□□ 1.34
CHRD-210ENST00000461684 ADGRB2O60241 1585 aa23.43■■□□□ 1.34
CHRD-210ENST00000461684 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
CHRD-210ENST00000461684 PLEKHG5O94827 1062 aa23.42■■□□□ 1.34
CHRD-210ENST00000461684 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
CHRD-210ENST00000461684 PMFBP1Q8TBY8 1022 aa23.4■■□□□ 1.34
CHRD-210ENST00000461684 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
CHRD-210ENST00000461684 ADGRB1O14514 1584 aa23.39■■□□□ 1.33
CHRD-210ENST00000461684 TRPM3Q9HCF6 1732 aaPredicted RBP23.38■■□□□ 1.33
CHRD-210ENST00000461684 RAB3GAP2Q9H2M9 1393 aa23.38■■□□□ 1.33
CHRD-210ENST00000461684 ONECUT3O60422 494 aaPredicted RBP23.37■■□□□ 1.33
CHRD-210ENST00000461684 SF3B2Q13435 895 aaKnown RBP23.37■■□□□ 1.33
CHRD-210ENST00000461684 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
CHRD-210ENST00000461684 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
CHRD-210ENST00000461684 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
CHRD-210ENST00000461684 NRAPQ86VF7 1730 aa23.34■■□□□ 1.33
CHRD-210ENST00000461684 FAM83GA6ND36 823 aa23.34■■□□□ 1.33
CHRD-210ENST00000461684 HIRIP3Q9BW71 556 aaPredicted RBP23.34■■□□□ 1.33
CHRD-210ENST00000461684 GPRASP1Q5JY77 1395 aa23.34■■□□□ 1.33
CHRD-210ENST00000461684 KRT27Q7Z3Y8 459 aa23.33■■□□□ 1.33
CHRD-210ENST00000461684 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.32
CHRD-210ENST00000461684 COL14A1Q05707 1796 aaKnown RBP23.32■■□□□ 1.32
CHRD-210ENST00000461684 DEFB132Q7Z7B7 95 aa23.32■■□□□ 1.32
CHRD-210ENST00000461684 KDM2AQ9Y2K7 1162 aa23.32■■□□□ 1.32
CHRD-210ENST00000461684 TULP4Q9NRJ4 1543 aa23.32■■□□□ 1.32
CHRD-210ENST00000461684 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
CHRD-210ENST00000461684 STAC3Q96MF2 364 aa23.31■■□□□ 1.32
CHRD-210ENST00000461684 WASLO00401 505 aaPredicted RBP23.3■■□□□ 1.32
CHRD-210ENST00000461684 A0A0G2JS52 829 aa23.29■■□□□ 1.32
CHRD-210ENST00000461684 MYT1Q01538 1121 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms