RNA–Protein interactions for RNA: ENST00000461620.1

SLC48A1-203, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 459 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-203ENST00000461620 RBM33Q96EV2 1170 aaKnown RBP22.48■■□□□ 1.19
SLC48A1-203ENST00000461620 WAPLQ7Z5K2 1190 aa22.47■■□□□ 1.19
SLC48A1-203ENST00000461620 SLC24A1O60721 1099 aa22.46■■□□□ 1.19
SLC48A1-203ENST00000461620 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
SLC48A1-203ENST00000461620 XIRP1Q702N8 1843 aaKnown RBP22.43■■□□□ 1.18
SLC48A1-203ENST00000461620 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
SLC48A1-203ENST00000461620 SLAIN2Q9P270 581 aa22.42■■□□□ 1.18
SLC48A1-203ENST00000461620 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.38■■□□□ 1.17
SLC48A1-203ENST00000461620 CDC42BPGQ6DT37 1551 aa22.38■■□□□ 1.17
SLC48A1-203ENST00000461620 SAFB2Q14151 953 aaKnown RBP eCLIP22.37■■□□□ 1.17
SLC48A1-203ENST00000461620 ARHGEF28Q8N1W1 1705 aaKnown RBP22.36■■□□□ 1.17
SLC48A1-203ENST00000461620 SBNO2Q9Y2G9 1366 aa22.36■■□□□ 1.17
SLC48A1-203ENST00000461620 NALCNQ8IZF0 1738 aa22.34■■□□□ 1.17
SLC48A1-203ENST00000461620 MINK1Q8N4C8 1332 aaPredicted RBP22.34■■□□□ 1.17
SLC48A1-203ENST00000461620 ADGRB2O60241 1585 aa22.34■■□□□ 1.17
SLC48A1-203ENST00000461620 WASLO00401 505 aaPredicted RBP22.34■■□□□ 1.17
SLC48A1-203ENST00000461620 MST1RQ04912 1400 aa22.33■■□□□ 1.17
SLC48A1-203ENST00000461620 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
SLC48A1-203ENST00000461620 PIP4K2BP78356 416 aa22.32■■□□□ 1.16
SLC48A1-203ENST00000461620 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
SLC48A1-203ENST00000461620 ANKARQ7Z5J8 1434 aa22.31■■□□□ 1.16
SLC48A1-203ENST00000461620 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
SLC48A1-203ENST00000461620 C1orf167Q5SNV9 1468 aa22.3■■□□□ 1.16
SLC48A1-203ENST00000461620 USP47Q96K76 1375 aa22.3■■□□□ 1.16
SLC48A1-203ENST00000461620 HIRIP3Q9BW71 556 aaPredicted RBP22.29■■□□□ 1.16
SLC48A1-203ENST00000461620 EIF4G2P78344 907 aaKnown RBP eCLIP22.28■■□□□ 1.16
SLC48A1-203ENST00000461620 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
SLC48A1-203ENST00000461620 PUS7Q96PZ0 661 aaKnown RBP22.27■■□□□ 1.16
SLC48A1-203ENST00000461620 CDK19Q9BWU1 502 aa22.27■■□□□ 1.16
SLC48A1-203ENST00000461620 BRINP3Q76B58 766 aa22.26■■□□□ 1.15
SLC48A1-203ENST00000461620 ESCO1Q5FWF5 840 aa22.24■■□□□ 1.15
SLC48A1-203ENST00000461620 TULP4Q9NRJ4 1543 aa22.24■■□□□ 1.15
SLC48A1-203ENST00000461620 FMN2Q9NZ56 1722 aa22.23■■□□□ 1.15
SLC48A1-203ENST00000461620 SRPK2P78362 688 aaKnown RBP22.23■■□□□ 1.15
SLC48A1-203ENST00000461620 CDCA8Q53HL2 280 aa22.23■■□□□ 1.15
SLC48A1-203ENST00000461620 CCDC61Q9Y6R9 512 aa22.23■■□□□ 1.15
SLC48A1-203ENST00000461620 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
SLC48A1-203ENST00000461620 NUDT16Q96DE0 195 aaKnown RBP22.22■■□□□ 1.15
SLC48A1-203ENST00000461620 TESK2Q96S53 571 aa22.22■■□□□ 1.15
SLC48A1-203ENST00000461620 TMF1P82094 1093 aa22.21■■□□□ 1.15
SLC48A1-203ENST00000461620 ORAI2Q96SN7 254 aa22.21■■□□□ 1.15
SLC48A1-203ENST00000461620 PHF8Q9UPP1 1060 aa22.2■■□□□ 1.14
SLC48A1-203ENST00000461620 NPHP3Q7Z494 1330 aa22.2■■□□□ 1.14
SLC48A1-203ENST00000461620 ATAD2Q6PL18 1390 aa22.2■■□□□ 1.14
SLC48A1-203ENST00000461620 NUTM2FA1L443 756 aa22.19■■□□□ 1.14
SLC48A1-203ENST00000461620 ILDR1Q86SU0 546 aaPredicted RBP22.19■■□□□ 1.14
SLC48A1-203ENST00000461620 ROBO1Q9Y6N7 1651 aa22.19■■□□□ 1.14
SLC48A1-203ENST00000461620 PLEKHG3A1L390 1219 aa22.17■■□□□ 1.14
SLC48A1-203ENST00000461620 PRR36Q9H6K5 1346 aa22.16■■□□□ 1.14
SLC48A1-203ENST00000461620 CABP2Q9NPB3 220 aa22.16■■□□□ 1.14
SLC48A1-203ENST00000461620 ATP7BP35670 1465 aa22.15■■□□□ 1.14
SLC48A1-203ENST00000461620 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
SLC48A1-203ENST00000461620 PSME1Q06323 249 aa22.15■■□□□ 1.14
SLC48A1-203ENST00000461620 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
SLC48A1-203ENST00000461620 HSPA1LP34931 641 aa22.14■■□□□ 1.13
SLC48A1-203ENST00000461620 KIF1AQ12756 1690 aa22.14■■□□□ 1.13
SLC48A1-203ENST00000461620 LRRC59Q96AG4 307 aaKnown RBP22.13■■□□□ 1.13
SLC48A1-203ENST00000461620 NINLQ9Y2I6 1382 aa22.12■■□□□ 1.13
SLC48A1-203ENST00000461620 SOS2Q07890 1332 aaPredicted RBP22.12■■□□□ 1.13
SLC48A1-203ENST00000461620 FOXO3O43524 673 aa22.12■■□□□ 1.13
SLC48A1-203ENST00000461620 NGDNQ8NEJ9 315 aaKnown RBP22.12■■□□□ 1.13
SLC48A1-203ENST00000461620 USP32Q8NFA0 1604 aa22.1■■□□□ 1.13
SLC48A1-203ENST00000461620 ZNF692Q9BU19 519 aaPredicted RBP22.1■■□□□ 1.13
SLC48A1-203ENST00000461620 POLR3AO14802 1390 aaPredicted RBP22.1■■□□□ 1.13
SLC48A1-203ENST00000461620 BRD4O60885 1362 aaPredicted RBP22.1■■□□□ 1.13
SLC48A1-203ENST00000461620 ITSN1Q15811 1721 aa22.09■■□□□ 1.13
SLC48A1-203ENST00000461620 PPIP5K1Q6PFW1 1433 aa22.09■■□□□ 1.13
SLC48A1-203ENST00000461620 PMFBP1Q8TBY8 1022 aa22.09■■□□□ 1.13
SLC48A1-203ENST00000461620 KRT28Q7Z3Y7 464 aa22.08■■□□□ 1.13
SLC48A1-203ENST00000461620 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
SLC48A1-203ENST00000461620 NHSL1Q5SYE7 1610 aa22.07■■□□□ 1.12
SLC48A1-203ENST00000461620 SBNO1A3KN83 1393 aa22.06■■□□□ 1.12
SLC48A1-203ENST00000461620 JCADQ9P266 1359 aa22.06■■□□□ 1.12
SLC48A1-203ENST00000461620 ACEP12821 1306 aa22.06■■□□□ 1.12
SLC48A1-203ENST00000461620 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
SLC48A1-203ENST00000461620 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
SLC48A1-203ENST00000461620 TERF2IPQ9NYB0 399 aa22.04■■□□□ 1.12
SLC48A1-203ENST00000461620 TOPAZ1Q8N9V7 1692 aa22.04■■□□□ 1.12
SLC48A1-203ENST00000461620 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
SLC48A1-203ENST00000461620 PXDNQ92626 1479 aa22.03■■□□□ 1.12
SLC48A1-203ENST00000461620 RGPD8O14715 1765 aaPredicted RBP22.02■■□□□ 1.12
SLC48A1-203ENST00000461620 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
SLC48A1-203ENST00000461620 DDX17Q92841 729 aaKnown RBP22.02■■□□□ 1.12
SLC48A1-203ENST00000461620 COL16A1Q07092 1604 aaPredicted RBP22.02■■□□□ 1.11
SLC48A1-203ENST00000461620 SPATA31A3Q5VYP0 1347 aa22.01■■□□□ 1.11
SLC48A1-203ENST00000461620 ARHGEF10O15013 1369 aa22■■□□□ 1.11
SLC48A1-203ENST00000461620 SPATA31A6Q5VVP1 1343 aa22■■□□□ 1.11
SLC48A1-203ENST00000461620 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
SLC48A1-203ENST00000461620 SLC12A5Q9H2X9 1139 aa21.98■■□□□ 1.11
SLC48A1-203ENST00000461620 XPCQ01831 940 aaPredicted RBP21.97■■□□□ 1.11
SLC48A1-203ENST00000461620 TNS3Q68CZ2 1445 aa21.97■■□□□ 1.11
SLC48A1-203ENST00000461620 PNPLA6Q8IY17 1366 aa21.96■■□□□ 1.11
SLC48A1-203ENST00000461620 USP6P35125 1406 aa21.96■■□□□ 1.11
SLC48A1-203ENST00000461620 TTC21AQ8NDW8 1320 aa21.95■■□□□ 1.1
SLC48A1-203ENST00000461620 KTN1Q86UP2 1357 aaKnown RBP21.95■■□□□ 1.1
SLC48A1-203ENST00000461620 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
SLC48A1-203ENST00000461620 ANKRD36BQ8N2N9 1353 aa21.94■■□□□ 1.1
SLC48A1-203ENST00000461620 SSH2Q76I76 1423 aa21.91■■□□□ 1.1
SLC48A1-203ENST00000461620 LMOD2Q6P5Q4 547 aa21.91■■□□□ 1.1
SLC48A1-203ENST00000461620 SHPRHQ149N8 1683 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms