RNA–Protein interactions for RNA: ENST00000461554.5

PCBP4-205, Transcript of poly(rC) binding protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCBP4, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-205ENST00000461554 PTPRUQ92729 1446 aa21.93■■□□□ 1.1
PCBP4-205ENST00000461554 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
PCBP4-205ENST00000461554 CHD2O14647 1828 aaKnown RBP21.91■■□□□ 1.1
PCBP4-205ENST00000461554 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
PCBP4-205ENST00000461554 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
PCBP4-205ENST00000461554 PTCH1Q13635 1447 aa21.9■■□□□ 1.1
PCBP4-205ENST00000461554 WAPLQ7Z5K2 1190 aa21.9■■□□□ 1.1
PCBP4-205ENST00000461554 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
PCBP4-205ENST00000461554 ROBO2Q9HCK4 1378 aa21.89■■□□□ 1.09
PCBP4-205ENST00000461554 PANK3Q9H999 370 aa21.88■■□□□ 1.09
PCBP4-205ENST00000461554 ADGRB2O60241 1585 aa21.87■■□□□ 1.09
PCBP4-205ENST00000461554 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
PCBP4-205ENST00000461554 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
PCBP4-205ENST00000461554 LMTK3Q96Q04 1460 aa21.86■■□□□ 1.09
PCBP4-205ENST00000461554 PER1O15534 1290 aaPredicted RBP21.85■■□□□ 1.09
PCBP4-205ENST00000461554 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.85■■□□□ 1.09
PCBP4-205ENST00000461554 CCER2I3L3R5 266 aa21.85■■□□□ 1.09
PCBP4-205ENST00000461554 ATAD2Q6PL18 1390 aa21.84■■□□□ 1.09
PCBP4-205ENST00000461554 NINLQ9Y2I6 1382 aa21.83■■□□□ 1.09
PCBP4-205ENST00000461554 NCKAP5LQ9HCH0 1330 aa21.83■■□□□ 1.09
PCBP4-205ENST00000461554 SRPK2P78362 688 aaKnown RBP21.83■■□□□ 1.08
PCBP4-205ENST00000461554 CABP2Q9NPB3 220 aa21.83■■□□□ 1.08
PCBP4-205ENST00000461554 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
PCBP4-205ENST00000461554 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
PCBP4-205ENST00000461554 NWD1Q149M9 1564 aa21.79■■□□□ 1.08
PCBP4-205ENST00000461554 TMC1Q8TDI8 760 aa21.79■■□□□ 1.08
PCBP4-205ENST00000461554 WASLO00401 505 aaPredicted RBP21.78■■□□□ 1.08
PCBP4-205ENST00000461554 KCNA6P17658 529 aa21.78■■□□□ 1.08
PCBP4-205ENST00000461554 KNSTRNQ9Y448 316 aa21.77■■□□□ 1.08
PCBP4-205ENST00000461554 SLC12A5Q9H2X9 1139 aa21.77■■□□□ 1.08
PCBP4-205ENST00000461554 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
PCBP4-205ENST00000461554 USP32Q8NFA0 1604 aa21.76■■□□□ 1.07
PCBP4-205ENST00000461554 STRCQ7RTU9 1775 aa21.76■■□□□ 1.07
PCBP4-205ENST00000461554 HSPA2P54652 639 aa21.76■■□□□ 1.07
PCBP4-205ENST00000461554 RALBP1Q15311 655 aa21.74■■□□□ 1.07
PCBP4-205ENST00000461554 PARD3Q8TEW0 1356 aa21.74■■□□□ 1.07
PCBP4-205ENST00000461554 NPC1L1Q9UHC9 1359 aa21.74■■□□□ 1.07
PCBP4-205ENST00000461554 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
PCBP4-205ENST00000461554 CNGB1Q14028 1251 aaPredicted RBP21.73■■□□□ 1.07
PCBP4-205ENST00000461554 TOPAZ1Q8N9V7 1692 aa21.73■■□□□ 1.07
PCBP4-205ENST00000461554 ATP7BP35670 1465 aa21.72■■□□□ 1.07
PCBP4-205ENST00000461554 NSD3Q9BZ95 1437 aa21.72■■□□□ 1.07
PCBP4-205ENST00000461554 AMER1Q5JTC6 1135 aaPredicted RBP21.71■■□□□ 1.07
PCBP4-205ENST00000461554 CARD14Q9BXL6 1004 aa21.71■■□□□ 1.07
PCBP4-205ENST00000461554 ITSN1Q15811 1721 aa21.71■■□□□ 1.07
PCBP4-205ENST00000461554 CD163L1Q9NR16 1453 aa21.71■■□□□ 1.07
PCBP4-205ENST00000461554 A0A1W2PP64 1363 aa21.7■■□□□ 1.06
PCBP4-205ENST00000461554 NKTRP30414 1462 aaKnown RBP21.69■■□□□ 1.06
PCBP4-205ENST00000461554 CC2D1BQ5T0F9 858 aaKnown RBP21.69■■□□□ 1.06
PCBP4-205ENST00000461554 FMN2Q9NZ56 1722 aa21.69■■□□□ 1.06
PCBP4-205ENST00000461554 MYBBP1AQ9BQG0 1328 aaKnown RBP21.69■■□□□ 1.06
PCBP4-205ENST00000461554 TERF2IPQ9NYB0 399 aa21.68■■□□□ 1.06
PCBP4-205ENST00000461554 PPIP5K1Q6PFW1 1433 aa21.68■■□□□ 1.06
PCBP4-205ENST00000461554 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
PCBP4-205ENST00000461554 AKAP12Q02952 1782 aa21.67■■□□□ 1.06
PCBP4-205ENST00000461554 NUDT16Q96DE0 195 aaKnown RBP21.67■■□□□ 1.06
PCBP4-205ENST00000461554 CABP1Q9NZU7 370 aa21.67■■□□□ 1.06
PCBP4-205ENST00000461554 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
PCBP4-205ENST00000461554 CCDC61Q9Y6R9 512 aa21.66■■□□□ 1.06
PCBP4-205ENST00000461554 RGPD8O14715 1765 aaPredicted RBP21.66■■□□□ 1.06
PCBP4-205ENST00000461554 MON2Q7Z3U7 1717 aa21.65■■□□□ 1.06
PCBP4-205ENST00000461554 HDGFL2Q7Z4V5 671 aaPredicted RBP21.65■■□□□ 1.06
PCBP4-205ENST00000461554 ADGRL3Q9HAR2 1447 aa21.65■■□□□ 1.06
PCBP4-205ENST00000461554 PRR36Q9H6K5 1346 aa21.65■■□□□ 1.06
PCBP4-205ENST00000461554 KIF20BQ96Q89 1820 aa21.63■■□□□ 1.05
PCBP4-205ENST00000461554 CGNL1Q0VF96 1302 aa21.63■■□□□ 1.05
PCBP4-205ENST00000461554 ANKRD26Q9UPS8 1709 aa21.63■■□□□ 1.05
PCBP4-205ENST00000461554 MRS2Q9HD23 443 aa21.63■■□□□ 1.05
PCBP4-205ENST00000461554 BRD4O60885 1362 aaPredicted RBP21.62■■□□□ 1.05
PCBP4-205ENST00000461554 NSD2O96028 1365 aa21.62■■□□□ 1.05
PCBP4-205ENST00000461554 CPSF1Q10570 1443 aaKnown RBP21.62■■□□□ 1.05
PCBP4-205ENST00000461554 ANKARQ7Z5J8 1434 aa21.62■■□□□ 1.05
PCBP4-205ENST00000461554 CCDC184Q52MB2 194 aa21.62■■□□□ 1.05
PCBP4-205ENST00000461554 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
PCBP4-205ENST00000461554 NLRP13Q86W25 1043 aa21.61■■□□□ 1.05
PCBP4-205ENST00000461554 EDC4Q6P2E9 1401 aaKnown RBP21.57■■□□□ 1.04
PCBP4-205ENST00000461554 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
PCBP4-205ENST00000461554 PLEKHG3A1L390 1219 aa21.56■■□□□ 1.04
PCBP4-205ENST00000461554 NUTM2FA1L443 756 aa21.56■■□□□ 1.04
PCBP4-205ENST00000461554 PROSER2Q86WR7 435 aaPredicted RBP21.56■■□□□ 1.04
PCBP4-205ENST00000461554 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
PCBP4-205ENST00000461554 NCOA3Q9Y6Q9 1424 aa21.55■■□□□ 1.04
PCBP4-205ENST00000461554 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
PCBP4-205ENST00000461554 C14orf37Q86TY3 774 aa21.54■■□□□ 1.04
PCBP4-205ENST00000461554 PPP2R1AP30153 589 aa21.53■■□□□ 1.04
PCBP4-205ENST00000461554 XIRP1Q702N8 1843 aaKnown RBP21.52■■□□□ 1.04
PCBP4-205ENST00000461554 ACEP12821 1306 aa21.52■■□□□ 1.04
PCBP4-205ENST00000461554 MORC1Q86VD1 984 aa21.52■■□□□ 1.03
PCBP4-205ENST00000461554 POLR3AO14802 1390 aaPredicted RBP21.51■■□□□ 1.03
PCBP4-205ENST00000461554 TMEM94Q12767 1356 aa21.5■■□□□ 1.03
PCBP4-205ENST00000461554 FYB1O15117 783 aa21.5■■□□□ 1.03
PCBP4-205ENST00000461554 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
PCBP4-205ENST00000461554 USP6P35125 1406 aa21.5■■□□□ 1.03
PCBP4-205ENST00000461554 DCCP43146 1447 aa21.5■■□□□ 1.03
PCBP4-205ENST00000461554 FAM9BQ8IZU0 186 aa21.48■■□□□ 1.03
PCBP4-205ENST00000461554 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
PCBP4-205ENST00000461554 PNISRQ8TF01 805 aaKnown RBP21.47■■□□□ 1.03
PCBP4-205ENST00000461554 GGNBP2Q9H3C7 697 aa21.47■■□□□ 1.03
PCBP4-205ENST00000461554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
PCBP4-205ENST00000461554 PMFBP1Q8TBY8 1022 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms