RNA–Protein interactions for RNA: ENST00000461533.1

ITGA9-204, Transcript of integrin subunit alpha 9, humanhuman

TSL 3

Gene ITGA9, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-204ENST00000461533 SOS2Q07890 1332 aaPredicted RBP11.67□□□□□ -0.54
ITGA9-204ENST00000461533 STAC3Q96MF2 364 aa11.67□□□□□ -0.54
ITGA9-204ENST00000461533 ORAI2Q96SN7 254 aa11.67□□□□□ -0.54
ITGA9-204ENST00000461533 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
ITGA9-204ENST00000461533 ZNF772Q68DY9 489 aaPredicted RBP11.66□□□□□ -0.54
ITGA9-204ENST00000461533 TMEM132EQ6IEE7 984 aa11.66□□□□□ -0.54
ITGA9-204ENST00000461533 STK26Q9P289 416 aa11.66□□□□□ -0.54
ITGA9-204ENST00000461533 DHX57Q6P158 1386 aaKnown RBP11.66□□□□□ -0.54
ITGA9-204ENST00000461533 MEX3CQ5U5Q3 659 aaKnown RBP11.65□□□□□ -0.54
ITGA9-204ENST00000461533 WAPLQ7Z5K2 1190 aa11.65□□□□□ -0.54
ITGA9-204ENST00000461533 DDX17Q92841 729 aaKnown RBP11.65□□□□□ -0.54
ITGA9-204ENST00000461533 CFAP70Q5T0N1 1121 aa11.64□□□□□ -0.55
ITGA9-204ENST00000461533 DLC1Q96QB1 1528 aa11.64□□□□□ -0.55
ITGA9-204ENST00000461533 PLEKHH1Q9ULM0 1364 aa11.64□□□□□ -0.55
ITGA9-204ENST00000461533 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
ITGA9-204ENST00000461533 FMN2Q9NZ56 1722 aa11.63□□□□□ -0.55
ITGA9-204ENST00000461533 ADGRB1O14514 1584 aa11.62□□□□□ -0.55
ITGA9-204ENST00000461533 COL22A1Q8NFW1 1626 aaPredicted RBP11.62□□□□□ -0.55
ITGA9-204ENST00000461533 NUTM2BA6NNL0 878 aaPredicted RBP11.62□□□□□ -0.55
ITGA9-204ENST00000461533 NUTM2EB1AL46 878 aaPredicted RBP11.62□□□□□ -0.55
ITGA9-204ENST00000461533 ESCO1Q5FWF5 840 aa11.62□□□□□ -0.55
ITGA9-204ENST00000461533 NUTM2AQ8IVF1 878 aaPredicted RBP11.62□□□□□ -0.55
ITGA9-204ENST00000461533 PXDNQ92626 1479 aa11.62□□□□□ -0.55
ITGA9-204ENST00000461533 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
ITGA9-204ENST00000461533 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
ITGA9-204ENST00000461533 DCAF11Q8TEB1 546 aa11.6□□□□□ -0.55
ITGA9-204ENST00000461533 AFF2P51816 1311 aa11.6□□□□□ -0.55
ITGA9-204ENST00000461533 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
ITGA9-204ENST00000461533 FOXO3O43524 673 aa11.59□□□□□ -0.55
ITGA9-204ENST00000461533 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
ITGA9-204ENST00000461533 RXRBP28702 533 aa11.58□□□□□ -0.56
ITGA9-204ENST00000461533 ANKARQ7Z5J8 1434 aa11.58□□□□□ -0.56
ITGA9-204ENST00000461533 C8orf37Q96NL8 207 aa11.57□□□□□ -0.56
ITGA9-204ENST00000461533 POGKQ9P215 609 aa11.57□□□□□ -0.56
ITGA9-204ENST00000461533 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
ITGA9-204ENST00000461533 NGLY1Q96IV0 654 aa11.56□□□□□ -0.56
ITGA9-204ENST00000461533 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
ITGA9-204ENST00000461533 EIF3AQ14152 1382 aaKnown RBP11.55□□□□□ -0.56
ITGA9-204ENST00000461533 ADAMTS2O95450 1211 aa11.55□□□□□ -0.56
ITGA9-204ENST00000461533 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
ITGA9-204ENST00000461533 PHF8Q9UPP1 1060 aa11.55□□□□□ -0.56
ITGA9-204ENST00000461533 SPATA31A3Q5VYP0 1347 aa11.55□□□□□ -0.56
ITGA9-204ENST00000461533 KIAA1210Q9ULL0 1709 aa11.55□□□□□ -0.56
ITGA9-204ENST00000461533 RGPD8O14715 1765 aaPredicted RBP11.54□□□□□ -0.56
ITGA9-204ENST00000461533 RBM6P78332 1123 aaKnown RBP11.54□□□□□ -0.56
ITGA9-204ENST00000461533 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
ITGA9-204ENST00000461533 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
ITGA9-204ENST00000461533 QTRT2Q9H974 415 aaKnown RBP11.54□□□□□ -0.56
ITGA9-204ENST00000461533 TRAK1Q9UPV9 953 aa11.54□□□□□ -0.56
ITGA9-204ENST00000461533 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
ITGA9-204ENST00000461533 USP32Q8NFA0 1604 aa11.53□□□□□ -0.56
ITGA9-204ENST00000461533 MARF1Q9Y4F3 1742 aaKnown RBP11.53□□□□□ -0.56
ITGA9-204ENST00000461533 PSME1Q06323 249 aa11.53□□□□□ -0.56
ITGA9-204ENST00000461533 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
ITGA9-204ENST00000461533 TULP4Q9NRJ4 1543 aa11.52□□□□□ -0.57
ITGA9-204ENST00000461533 USP21Q9UK80 565 aa11.52□□□□□ -0.57
ITGA9-204ENST00000461533 ARHGEF28Q8N1W1 1705 aaKnown RBP11.52□□□□□ -0.57
ITGA9-204ENST00000461533 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.57
ITGA9-204ENST00000461533 WASLO00401 505 aaPredicted RBP11.51□□□□□ -0.57
ITGA9-204ENST00000461533 TRPC5Q9UL62 973 aaPredicted RBP11.51□□□□□ -0.57
ITGA9-204ENST00000461533 MINK1Q8N4C8 1332 aaPredicted RBP11.51□□□□□ -0.57
ITGA9-204ENST00000461533 ARHGEF10O15013 1369 aa11.51□□□□□ -0.57
ITGA9-204ENST00000461533 ATRNO75882 1429 aa11.51□□□□□ -0.57
ITGA9-204ENST00000461533 RGS12O14924 1447 aa11.5□□□□□ -0.57
ITGA9-204ENST00000461533 BCL9LQ86UU0 1499 aa11.5□□□□□ -0.57
ITGA9-204ENST00000461533 UPF1Q92900 1129 aaKnown RBP eCLIP11.49□□□□□ -0.57
ITGA9-204ENST00000461533 HIRIP3Q9BW71 556 aaPredicted RBP11.49□□□□□ -0.57
ITGA9-204ENST00000461533 PRR36Q9H6K5 1346 aa11.49□□□□□ -0.57
ITGA9-204ENST00000461533 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.49□□□□□ -0.57
ITGA9-204ENST00000461533 SLIT2O94813 1529 aa11.48□□□□□ -0.57
ITGA9-204ENST00000461533 EP400Q96L91 3159 aa11.47□□□□□ -0.57
ITGA9-204ENST00000461533 ITSN1Q15811 1721 aa11.47□□□□□ -0.57
ITGA9-204ENST00000461533 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
ITGA9-204ENST00000461533 ATP7BP35670 1465 aa11.47□□□□□ -0.57
ITGA9-204ENST00000461533 GPRASP1Q5JY77 1395 aa11.47□□□□□ -0.57
ITGA9-204ENST00000461533 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
ITGA9-204ENST00000461533 ABCA3Q99758 1704 aa11.46□□□□□ -0.58
ITGA9-204ENST00000461533 ALS2Q96Q42 1657 aa11.46□□□□□ -0.58
ITGA9-204ENST00000461533 NBPF1Q3BBV0 1214 aa11.45□□□□□ -0.58
ITGA9-204ENST00000461533 UNC5CLQ8IV45 518 aa11.45□□□□□ -0.58
ITGA9-204ENST00000461533 L3MBTL2Q969R5 705 aa11.45□□□□□ -0.58
ITGA9-204ENST00000461533 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
ITGA9-204ENST00000461533 NWD2Q9ULI1 1742 aa11.44□□□□□ -0.58
ITGA9-204ENST00000461533 NGDNQ8NEJ9 315 aaKnown RBP11.44□□□□□ -0.58
ITGA9-204ENST00000461533 CABLES1Q8TDN4 633 aa11.44□□□□□ -0.58
ITGA9-204ENST00000461533 GJD4Q96KN9 370 aaPredicted RBP11.44□□□□□ -0.58
ITGA9-204ENST00000461533 CDK19Q9BWU1 502 aa11.44□□□□□ -0.58
ITGA9-204ENST00000461533 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
ITGA9-204ENST00000461533 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
ITGA9-204ENST00000461533 TOPAZ1Q8N9V7 1692 aa11.43□□□□□ -0.58
ITGA9-204ENST00000461533 HAP1P54257 671 aaPredicted RBP11.43□□□□□ -0.58
ITGA9-204ENST00000461533 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
ITGA9-204ENST00000461533 CCDC61Q9Y6R9 512 aa11.43□□□□□ -0.58
ITGA9-204ENST00000461533 CENPJQ9HC77 1338 aaPredicted RBP11.42□□□□□ -0.58
ITGA9-204ENST00000461533 PLEKHG3A1L390 1219 aa11.42□□□□□ -0.58
ITGA9-204ENST00000461533 RALGAPBQ86X10 1494 aa11.42□□□□□ -0.58
ITGA9-204ENST00000461533 PLCH1Q4KWH8 1693 aa11.42□□□□□ -0.58
ITGA9-204ENST00000461533 GLI3P10071 1580 aa11.41□□□□□ -0.58
ITGA9-204ENST00000461533 VPS72Q15906 364 aa11.41□□□□□ -0.58
ITGA9-204ENST00000461533 SIN3AQ96ST3 1273 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms