RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 KIF16BQ96L93 1317 aa17.98■□□□□ 0.47
NCL-207ENST00000461347 ERCC6L2Q5T890 1561 aa17.98■□□□□ 0.47
NCL-207ENST00000461347 MCM4P33991 863 aa17.98■□□□□ 0.47
NCL-207ENST00000461347 HSP90AA2PQ14568 343 aaPredicted RBP17.98■□□□□ 0.47
NCL-207ENST00000461347 C14orf37Q86TY3 774 aa17.98■□□□□ 0.47
NCL-207ENST00000461347 ARHGEF12Q9NZN5 1544 aa17.97■□□□□ 0.47
NCL-207ENST00000461347 ATP10BO94823 1461 aa17.97■□□□□ 0.47
NCL-207ENST00000461347 NOL8Q76FK4 1167 aaKnown RBP17.97■□□□□ 0.47
NCL-207ENST00000461347 NINLQ9Y2I6 1382 aa17.97■□□□□ 0.47
NCL-207ENST00000461347 ARID3AQ99856 593 aa17.97■□□□□ 0.47
NCL-207ENST00000461347 TBC1D2Q9BYX2 928 aa17.97■□□□□ 0.47
NCL-207ENST00000461347 HMOX1P09601 288 aa17.96■□□□□ 0.47
NCL-207ENST00000461347 MRE11P49959 708 aa17.96■□□□□ 0.47
NCL-207ENST00000461347 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
NCL-207ENST00000461347 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.47
NCL-207ENST00000461347 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
NCL-207ENST00000461347 NSD3Q9BZ95 1437 aa17.96■□□□□ 0.47
NCL-207ENST00000461347 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.46
NCL-207ENST00000461347 ITSN2Q9NZM3 1697 aa17.95■□□□□ 0.46
NCL-207ENST00000461347 A0A0U1RQG5 324 aaPredicted RBP17.95■□□□□ 0.46
NCL-207ENST00000461347 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
NCL-207ENST00000461347 FAM135AQ9P2D6 1515 aa17.95■□□□□ 0.46
NCL-207ENST00000461347 ADGRF5Q8IZF2 1346 aa17.95■□□□□ 0.46
NCL-207ENST00000461347 SEC24BO95487 1268 aa17.94■□□□□ 0.46
NCL-207ENST00000461347 HAP1P54257 671 aaPredicted RBP17.94■□□□□ 0.46
NCL-207ENST00000461347 SKOR2Q2VWA4 1001 aaPredicted RBP17.94■□□□□ 0.46
NCL-207ENST00000461347 ATF7IPQ6VMQ6 1270 aa17.94■□□□□ 0.46
NCL-207ENST00000461347 UBE2Q2Q8WVN8 375 aa17.94■□□□□ 0.46
NCL-207ENST00000461347 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
NCL-207ENST00000461347 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
NCL-207ENST00000461347 TNNQ9UQP3 1299 aa17.93■□□□□ 0.46
NCL-207ENST00000461347 MCCP23508 829 aa17.92■□□□□ 0.46
NCL-207ENST00000461347 SCAF11Q99590 1463 aaKnown RBP17.91■□□□□ 0.46
NCL-207ENST00000461347 COL17A1Q9UMD9 1497 aaPredicted RBP17.91■□□□□ 0.46
NCL-207ENST00000461347 ADGRL2O95490 1459 aa17.91■□□□□ 0.46
NCL-207ENST00000461347 ST18O60284 1047 aa17.91■□□□□ 0.46
NCL-207ENST00000461347 PODXL2Q9NZ53 605 aa17.91■□□□□ 0.46
NCL-207ENST00000461347 FOXD4L6Q3SYB3 417 aaPredicted RBP17.9■□□□□ 0.46
NCL-207ENST00000461347 FOXD4L3Q6VB84 417 aaPredicted RBP17.9■□□□□ 0.46
NCL-207ENST00000461347 RTF1Q92541 710 aaKnown RBP17.9■□□□□ 0.46
NCL-207ENST00000461347 UHRF1BP1LA0JNW5 1464 aa17.9■□□□□ 0.46
NCL-207ENST00000461347 CDC42BPAQ5VT25 1732 aa17.9■□□□□ 0.46
NCL-207ENST00000461347 CROCC2H7BZ55 1655 aa17.89■□□□□ 0.46
NCL-207ENST00000461347 NUTM2FA1L443 756 aa17.89■□□□□ 0.45
NCL-207ENST00000461347 TMEM57Q8N5G2 664 aa17.89■□□□□ 0.45
NCL-207ENST00000461347 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
NCL-207ENST00000461347 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
NCL-207ENST00000461347 TRIM6-TRIM34B2RNG4 842 aa17.89■□□□□ 0.45
NCL-207ENST00000461347 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
NCL-207ENST00000461347 PRKAR2BP31323 418 aa17.88■□□□□ 0.45
NCL-207ENST00000461347 TBC1D32Q96NH3 1257 aa17.88■□□□□ 0.45
NCL-207ENST00000461347 KDM5CP41229 1560 aa17.88■□□□□ 0.45
NCL-207ENST00000461347 A2MP01023 1474 aa17.88■□□□□ 0.45
NCL-207ENST00000461347 RLBP1P12271 317 aa17.87■□□□□ 0.45
NCL-207ENST00000461347 OS9Q13438 667 aaPredicted RBP17.87■□□□□ 0.45
NCL-207ENST00000461347 HMMRO75330 724 aa17.86■□□□□ 0.45
NCL-207ENST00000461347 TMPOP42166 694 aaKnown RBP17.86■□□□□ 0.45
NCL-207ENST00000461347 MCTP1Q6DN14 999 aa17.86■□□□□ 0.45
NCL-207ENST00000461347 ASXL1Q8IXJ9 1541 aa17.85■□□□□ 0.45
NCL-207ENST00000461347 GRPEL1Q9HAV7 217 aa17.85■□□□□ 0.45
NCL-207ENST00000461347 API5Q9BZZ5 524 aaKnown RBP17.85■□□□□ 0.45
NCL-207ENST00000461347 BLMP54132 1417 aaPredicted RBP17.85■□□□□ 0.45
NCL-207ENST00000461347 ABCC2Q92887 1545 aa17.84■□□□□ 0.45
NCL-207ENST00000461347 SYCP2Q9BX26 1530 aa17.84■□□□□ 0.45
NCL-207ENST00000461347 TRIM27P14373 513 aa17.84■□□□□ 0.45
NCL-207ENST00000461347 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
NCL-207ENST00000461347 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
NCL-207ENST00000461347 KCNJ4P48050 445 aa17.84■□□□□ 0.45
NCL-207ENST00000461347 GNAI1P63096 354 aa17.83■□□□□ 0.45
NCL-207ENST00000461347 CHD1LQ86WJ1 897 aa17.83■□□□□ 0.45
NCL-207ENST00000461347 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
NCL-207ENST00000461347 ZMYM4Q5VZL5 1548 aa17.83■□□□□ 0.45
NCL-207ENST00000461347 CDC45O75419 566 aa17.83■□□□□ 0.44
NCL-207ENST00000461347 NASPP49321 788 aaPredicted RBP17.83■□□□□ 0.44
NCL-207ENST00000461347 CT47B1P0C2W7 299 aaPredicted RBP17.82■□□□□ 0.44
NCL-207ENST00000461347 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
NCL-207ENST00000461347 STK31Q9BXU1 1019 aa17.82■□□□□ 0.44
NCL-207ENST00000461347 ZCCHC11Q5TAX3 1644 aaKnown RBP17.82■□□□□ 0.44
NCL-207ENST00000461347 RILPL2Q969X0 211 aa17.81■□□□□ 0.44
NCL-207ENST00000461347 COG3Q96JB2 828 aa17.81■□□□□ 0.44
NCL-207ENST00000461347 THUMPD2Q9BTF0 503 aaKnown RBP17.81■□□□□ 0.44
NCL-207ENST00000461347 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
NCL-207ENST00000461347 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
NCL-207ENST00000461347 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
NCL-207ENST00000461347 CDC42BPBQ9Y5S2 1711 aa17.8■□□□□ 0.44
NCL-207ENST00000461347 CAVIN1Q6NZI2 390 aaKnown RBP17.8■□□□□ 0.44
NCL-207ENST00000461347 PIK3C2GO75747 1445 aa17.79■□□□□ 0.44
NCL-207ENST00000461347 ESPNB1AK53 854 aa17.79■□□□□ 0.44
NCL-207ENST00000461347 PANK2Q9BZ23 570 aa17.79■□□□□ 0.44
NCL-207ENST00000461347 REC8O95072 547 aa17.79■□□□□ 0.44
NCL-207ENST00000461347 NUCB2P80303 420 aa17.79■□□□□ 0.44
NCL-207ENST00000461347 SYAP1Q96A49 352 aaPredicted RBP17.79■□□□□ 0.44
NCL-207ENST00000461347 PREX2Q70Z35 1606 aa17.79■□□□□ 0.44
NCL-207ENST00000461347 INTS3Q68E01 1043 aaKnown RBP17.78■□□□□ 0.44
NCL-207ENST00000461347 GCC1Q96CN9 775 aa17.78■□□□□ 0.44
NCL-207ENST00000461347 TWISTNBQ3B726 338 aaPredicted RBP17.78■□□□□ 0.44
NCL-207ENST00000461347 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
NCL-207ENST00000461347 K7ELQ4 463 aaPredicted RBP17.78■□□□□ 0.44
NCL-207ENST00000461347 KIAA2012Q0VF49 1180 aa17.77■□□□□ 0.44
NCL-207ENST00000461347 CABP1Q9NZU7 370 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms