RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 PRDM9Q9NQV7 894 aa8.8□□□□□ -1
CLK1-206ENST00000461326 WIPF1O43516 503 aa8.79□□□□□ -1
CLK1-206ENST00000461326 NFX1Q12986 1120 aaKnown RBP8.79□□□□□ -1
CLK1-206ENST00000461326 SMYD5Q6GMV2 418 aa8.79□□□□□ -1
CLK1-206ENST00000461326 BRICD5Q6PL45 260 aa8.79□□□□□ -1
CLK1-206ENST00000461326 WNT7AO00755 349 aa8.78□□□□□ -1
CLK1-206ENST00000461326 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
CLK1-206ENST00000461326 SENP2Q9HC62 589 aa8.77□□□□□ -1.01
CLK1-206ENST00000461326 FECHP22830 423 aa8.76□□□□□ -1.01
CLK1-206ENST00000461326 ATP13A2Q9NQ11 1180 aa8.76□□□□□ -1.01
CLK1-206ENST00000461326 SMPD1P17405 629 aa8.75□□□□□ -1.01
CLK1-206ENST00000461326 TRIM32Q13049 653 aa8.75□□□□□ -1.01
CLK1-206ENST00000461326 Q3C1V9 767 aa8.75□□□□□ -1.01
CLK1-206ENST00000461326 RBM26Q5T8P6 1007 aaKnown RBP8.75□□□□□ -1.01
CLK1-206ENST00000461326 RNF19BQ6ZMZ0 732 aa8.74□□□□□ -1.01
CLK1-206ENST00000461326 REPIN1Q9BWE0 567 aaKnown RBP8.74□□□□□ -1.01
CLK1-206ENST00000461326 NLRP7Q8WX94 980 aa8.73□□□□□ -1.01
CLK1-206ENST00000461326 KIFC2Q96AC6 838 aa8.73□□□□□ -1.01
CLK1-206ENST00000461326 TRIM47Q96LD4 638 aa8.73□□□□□ -1.01
CLK1-206ENST00000461326 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
CLK1-206ENST00000461326 TERTO14746 1132 aaKnown RBP8.72□□□□□ -1.01
CLK1-206ENST00000461326 MRGPRX2Q96LB1 330 aa8.72□□□□□ -1.01
CLK1-206ENST00000461326 SNRPBP14678 240 aaKnown RBP8.71□□□□□ -1.02
CLK1-206ENST00000461326 MMP16P51512 607 aa8.71□□□□□ -1.02
CLK1-206ENST00000461326 KDM2AQ9Y2K7 1162 aa8.71□□□□□ -1.02
CLK1-206ENST00000461326 J3QL48 77 aa8.7□□□□□ -1.02
CLK1-206ENST00000461326 GPR37O15354 613 aa8.7□□□□□ -1.02
CLK1-206ENST00000461326 PHOX2BQ99453 314 aa8.68□□□□□ -1.02
CLK1-206ENST00000461326 USB1Q9BQ65 265 aaKnown RBP8.68□□□□□ -1.02
CLK1-206ENST00000461326 HPS1Q92902 700 aa8.67□□□□□ -1.02
CLK1-206ENST00000461326 FAM181BA6NEQ2 426 aa8.66□□□□□ -1.02
CLK1-206ENST00000461326 DXOO77932 396 aaKnown RBP8.66□□□□□ -1.02
CLK1-206ENST00000461326 CCDC24Q8N4L8 307 aa8.66□□□□□ -1.02
CLK1-206ENST00000461326 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
CLK1-206ENST00000461326 WNT7BP56706 349 aa8.65□□□□□ -1.02
CLK1-206ENST00000461326 RC3H1Q5TC82 1133 aaKnown RBP8.65□□□□□ -1.02
CLK1-206ENST00000461326 CD46P15529 392 aa8.64□□□□□ -1.03
CLK1-206ENST00000461326 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
CLK1-206ENST00000461326 KDM4AO75164 1064 aa8.63□□□□□ -1.03
CLK1-206ENST00000461326 LCE2CQ5TA81 110 aa8.63□□□□□ -1.03
CLK1-206ENST00000461326 USP46P62068 366 aa8.62□□□□□ -1.03
CLK1-206ENST00000461326 ALDH1A1P00352 501 aa8.61□□□□□ -1.03
CLK1-206ENST00000461326 SKOR1P84550 965 aa8.61□□□□□ -1.03
CLK1-206ENST00000461326 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
CLK1-206ENST00000461326 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
CLK1-206ENST00000461326 IRF7Q92985 503 aa8.58□□□□□ -1.04
CLK1-206ENST00000461326 JUNDP17535 347 aa8.57□□□□□ -1.04
CLK1-206ENST00000461326 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
CLK1-206ENST00000461326 HOXA2O43364 376 aa8.56□□□□□ -1.04
CLK1-206ENST00000461326 ZSCAN1Q8NBB4 408 aa8.56□□□□□ -1.04
CLK1-206ENST00000461326 EHBP1Q8NDI1 1231 aa8.56□□□□□ -1.04
CLK1-206ENST00000461326 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
CLK1-206ENST00000461326 MAP2K5Q13163 448 aa8.55□□□□□ -1.04
CLK1-206ENST00000461326 HLA-CQ95604 372 aa8.55□□□□□ -1.04
CLK1-206ENST00000461326 GMPRP36959 345 aa8.54□□□□□ -1.04
CLK1-206ENST00000461326 NUDT12Q9BQG2 462 aa8.54□□□□□ -1.04
CLK1-206ENST00000461326 BMP1P13497 986 aa8.53□□□□□ -1.04
CLK1-206ENST00000461326 MDM2Q00987 491 aaPredicted RBP8.53□□□□□ -1.04
CLK1-206ENST00000461326 SIAH2O43255 324 aa8.52□□□□□ -1.05
CLK1-206ENST00000461326 TRIM46Q7Z4K8 759 aa8.52□□□□□ -1.05
CLK1-206ENST00000461326 RETREG3Q86VR2 466 aa8.52□□□□□ -1.05
CLK1-206ENST00000461326 H3BM21 787 aa8.5□□□□□ -1.05
CLK1-206ENST00000461326 GUCA2AQ02747 115 aa8.5□□□□□ -1.05
CLK1-206ENST00000461326 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
CLK1-206ENST00000461326 IRF6O14896 467 aa8.49□□□□□ -1.05
CLK1-206ENST00000461326 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
CLK1-206ENST00000461326 TULP1O00294 542 aaPredicted RBP8.48□□□□□ -1.05
CLK1-206ENST00000461326 VEGFBP49765 207 aa8.48□□□□□ -1.05
CLK1-206ENST00000461326 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
CLK1-206ENST00000461326 CCNYL3P0C7X3 344 aa8.47□□□□□ -1.05
CLK1-206ENST00000461326 GPCPD1Q9NPB8 672 aa8.47□□□□□ -1.05
CLK1-206ENST00000461326 MINK1Q8N4C8 1332 aaPredicted RBP8.47□□□□□ -1.05
CLK1-206ENST00000461326 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.06
CLK1-206ENST00000461326 MS4A1P11836 297 aa8.46□□□□□ -1.06
CLK1-206ENST00000461326 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
CLK1-206ENST00000461326 CLCN1P35523 988 aa8.46□□□□□ -1.06
CLK1-206ENST00000461326 SH3BP2P78314 561 aa8.46□□□□□ -1.06
CLK1-206ENST00000461326 ZFP42Q96MM3 310 aa8.46□□□□□ -1.06
CLK1-206ENST00000461326 C6orf229H3BNL8 230 aa8.45□□□□□ -1.06
CLK1-206ENST00000461326 FDX1P10109 184 aa8.44□□□□□ -1.06
CLK1-206ENST00000461326 SCARF1Q14162 830 aa8.44□□□□□ -1.06
CLK1-206ENST00000461326 KRI1Q8N9T8 703 aaKnown RBP8.44□□□□□ -1.06
CLK1-206ENST00000461326 UNC93B1Q9H1C4 597 aa8.44□□□□□ -1.06
CLK1-206ENST00000461326 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
CLK1-206ENST00000461326 ERBB4Q15303 1308 aa8.44□□□□□ -1.06
CLK1-206ENST00000461326 PTPRNQ16849 979 aa8.43□□□□□ -1.06
CLK1-206ENST00000461326 CCDC102AQ96A19 550 aa8.43□□□□□ -1.06
CLK1-206ENST00000461326 TLL2Q9Y6L7 1015 aa8.43□□□□□ -1.06
CLK1-206ENST00000461326 VARSP26640 1264 aaKnown RBP8.42□□□□□ -1.06
CLK1-206ENST00000461326 NNTQ13423 1086 aa8.42□□□□□ -1.06
CLK1-206ENST00000461326 MRPL14Q6P1L8 145 aaKnown RBP8.42□□□□□ -1.06
CLK1-206ENST00000461326 LINC01559Q495D7 138 aa8.41□□□□□ -1.06
CLK1-206ENST00000461326 TPRNQ4KMQ1 711 aa8.41□□□□□ -1.06
CLK1-206ENST00000461326 MPNDQ8N594 471 aa8.41□□□□□ -1.06
CLK1-206ENST00000461326 EVA1BQ9NVM1 165 aa8.41□□□□□ -1.06
CLK1-206ENST00000461326 ZNF511Q8NB15 262 aa8.4□□□□□ -1.06
CLK1-206ENST00000461326 BAP1Q92560 729 aa8.4□□□□□ -1.06
CLK1-206ENST00000461326 ADH1CP00326 375 aa8.39□□□□□ -1.07
CLK1-206ENST00000461326 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
CLK1-206ENST00000461326 PURBQ96QR8 312 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms