RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 BRINP3Q76B58 766 aa23.25■■□□□ 1.31
SHANK1-205ENST00000461154 NALCNQ8IZF0 1738 aa23.25■■□□□ 1.31
SHANK1-205ENST00000461154 TRPM1Q7Z4N2 1603 aa23.24■■□□□ 1.31
SHANK1-205ENST00000461154 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
SHANK1-205ENST00000461154 DISP3Q9P2K9 1392 aa23.22■■□□□ 1.31
SHANK1-205ENST00000461154 PLEKHH1Q9ULM0 1364 aa23.21■■□□□ 1.31
SHANK1-205ENST00000461154 NBPF1Q3BBV0 1214 aa23.2■■□□□ 1.3
SHANK1-205ENST00000461154 POGKQ9P215 609 aa23.2■■□□□ 1.3
SHANK1-205ENST00000461154 C1orf167Q5SNV9 1468 aa23.19■■□□□ 1.3
SHANK1-205ENST00000461154 ROCK2O75116 1388 aaKnown RBP23.19■■□□□ 1.3
SHANK1-205ENST00000461154 NBPF8Q3BBV2 869 aa23.19■■□□□ 1.3
SHANK1-205ENST00000461154 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
SHANK1-205ENST00000461154 ARHGEF28Q8N1W1 1705 aaKnown RBP23.17■■□□□ 1.3
SHANK1-205ENST00000461154 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
SHANK1-205ENST00000461154 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
SHANK1-205ENST00000461154 CDC42BPGQ6DT37 1551 aa23.15■■□□□ 1.3
SHANK1-205ENST00000461154 RALGAPBQ86X10 1494 aa23.15■■□□□ 1.3
SHANK1-205ENST00000461154 JCADQ9P266 1359 aa23.14■■□□□ 1.3
SHANK1-205ENST00000461154 ORAI2Q96SN7 254 aa23.14■■□□□ 1.29
SHANK1-205ENST00000461154 SAFB2Q14151 953 aaKnown RBP eCLIP23.13■■□□□ 1.29
SHANK1-205ENST00000461154 GPRASP1Q5JY77 1395 aa23.12■■□□□ 1.29
SHANK1-205ENST00000461154 ESCO1Q5FWF5 840 aa23.11■■□□□ 1.29
SHANK1-205ENST00000461154 MED1Q15648 1581 aaPredicted RBP23.1■■□□□ 1.29
SHANK1-205ENST00000461154 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
SHANK1-205ENST00000461154 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
SHANK1-205ENST00000461154 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
SHANK1-205ENST00000461154 NUTM2FA1L443 756 aa23.09■■□□□ 1.29
SHANK1-205ENST00000461154 EIF3AQ14152 1382 aaKnown RBP23.09■■□□□ 1.29
SHANK1-205ENST00000461154 DDX17Q92841 729 aaKnown RBP23.08■■□□□ 1.29
SHANK1-205ENST00000461154 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
SHANK1-205ENST00000461154 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
SHANK1-205ENST00000461154 FMN2Q9NZ56 1722 aa23.07■■□□□ 1.28
SHANK1-205ENST00000461154 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
SHANK1-205ENST00000461154 SPATA31A6Q5VVP1 1343 aa23.06■■□□□ 1.28
SHANK1-205ENST00000461154 MINK1Q8N4C8 1332 aaPredicted RBP23.06■■□□□ 1.28
SHANK1-205ENST00000461154 NHSL1Q5SYE7 1610 aa23.05■■□□□ 1.28
SHANK1-205ENST00000461154 NPHP3Q7Z494 1330 aa23.05■■□□□ 1.28
SHANK1-205ENST00000461154 SOS2Q07890 1332 aaPredicted RBP23.04■■□□□ 1.28
SHANK1-205ENST00000461154 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
SHANK1-205ENST00000461154 QRICH2Q9H0J4 1663 aa23.03■■□□□ 1.28
SHANK1-205ENST00000461154 FOXO3O43524 673 aa23.02■■□□□ 1.28
SHANK1-205ENST00000461154 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
SHANK1-205ENST00000461154 PHF8Q9UPP1 1060 aa22.99■■□□□ 1.27
SHANK1-205ENST00000461154 ANKARQ7Z5J8 1434 aa22.99■■□□□ 1.27
SHANK1-205ENST00000461154 ILDR2Q71H61 639 aa22.98■■□□□ 1.27
SHANK1-205ENST00000461154 TULP4Q9NRJ4 1543 aa22.97■■□□□ 1.27
SHANK1-205ENST00000461154 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
SHANK1-205ENST00000461154 PNPLA6Q8IY17 1366 aa22.96■■□□□ 1.27
SHANK1-205ENST00000461154 KIF1AQ12756 1690 aa22.94■■□□□ 1.26
SHANK1-205ENST00000461154 NUTM2BA6NNL0 878 aaPredicted RBP22.94■■□□□ 1.26
SHANK1-205ENST00000461154 NUTM2EB1AL46 878 aaPredicted RBP22.94■■□□□ 1.26
SHANK1-205ENST00000461154 MEX3CQ5U5Q3 659 aaKnown RBP22.94■■□□□ 1.26
SHANK1-205ENST00000461154 NUTM2AQ8IVF1 878 aaPredicted RBP22.94■■□□□ 1.26
SHANK1-205ENST00000461154 RGPD8O14715 1765 aaPredicted RBP22.94■■□□□ 1.26
SHANK1-205ENST00000461154 SBNO2Q9Y2G9 1366 aa22.93■■□□□ 1.26
SHANK1-205ENST00000461154 XPCQ01831 940 aaPredicted RBP22.93■■□□□ 1.26
SHANK1-205ENST00000461154 PSME1Q06323 249 aa22.93■■□□□ 1.26
SHANK1-205ENST00000461154 KRT28Q7Z3Y7 464 aa22.93■■□□□ 1.26
SHANK1-205ENST00000461154 CDK19Q9BWU1 502 aa22.93■■□□□ 1.26
SHANK1-205ENST00000461154 USP32Q8NFA0 1604 aa22.93■■□□□ 1.26
SHANK1-205ENST00000461154 PXDNQ92626 1479 aa22.92■■□□□ 1.26
SHANK1-205ENST00000461154 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
SHANK1-205ENST00000461154 EVC2Q86UK5 1308 aa22.91■■□□□ 1.26
SHANK1-205ENST00000461154 SOCS7O14512 581 aa22.91■■□□□ 1.26
SHANK1-205ENST00000461154 PMFBP1Q8TBY8 1022 aa22.91■■□□□ 1.26
SHANK1-205ENST00000461154 USP47Q96K76 1375 aa22.9■■□□□ 1.26
SHANK1-205ENST00000461154 PRR36Q9H6K5 1346 aa22.9■■□□□ 1.26
SHANK1-205ENST00000461154 RGS17Q9UGC6 210 aaPredicted RBP22.9■■□□□ 1.26
SHANK1-205ENST00000461154 LRP6O75581 1613 aa22.9■■□□□ 1.26
SHANK1-205ENST00000461154 SLC24A1O60721 1099 aa22.89■■□□□ 1.25
SHANK1-205ENST00000461154 SRPK2P78362 688 aaKnown RBP22.89■■□□□ 1.25
SHANK1-205ENST00000461154 NUDT16Q96DE0 195 aaKnown RBP22.89■■□□□ 1.25
SHANK1-205ENST00000461154 ATP7BP35670 1465 aa22.89■■□□□ 1.25
SHANK1-205ENST00000461154 SPATA31A3Q5VYP0 1347 aa22.86■■□□□ 1.25
SHANK1-205ENST00000461154 ST20-MTHFSA0A0A6YYL1 179 aa22.86■■□□□ 1.25
SHANK1-205ENST00000461154 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
SHANK1-205ENST00000461154 CCDC61Q9Y6R9 512 aa22.85■■□□□ 1.25
SHANK1-205ENST00000461154 CABP2Q9NPB3 220 aa22.84■■□□□ 1.25
SHANK1-205ENST00000461154 SBNO1A3KN83 1393 aa22.84■■□□□ 1.25
SHANK1-205ENST00000461154 TOPAZ1Q8N9V7 1692 aa22.84■■□□□ 1.25
SHANK1-205ENST00000461154 ZNF772Q68DY9 489 aaPredicted RBP22.83■■□□□ 1.25
SHANK1-205ENST00000461154 ADAMTS2O95450 1211 aa22.81■■□□□ 1.24
SHANK1-205ENST00000461154 POTEAQ6S8J7 498 aa22.81■■□□□ 1.24
SHANK1-205ENST00000461154 ATAD2Q6PL18 1390 aa22.8■■□□□ 1.24
SHANK1-205ENST00000461154 PLEKHG3A1L390 1219 aa22.8■■□□□ 1.24
SHANK1-205ENST00000461154 C8orf37Q96NL8 207 aa22.8■■□□□ 1.24
SHANK1-205ENST00000461154 TESK2Q96S53 571 aa22.8■■□□□ 1.24
SHANK1-205ENST00000461154 TNS3Q68CZ2 1445 aa22.8■■□□□ 1.24
SHANK1-205ENST00000461154 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
SHANK1-205ENST00000461154 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
SHANK1-205ENST00000461154 LMOD2Q6P5Q4 547 aa22.79■■□□□ 1.24
SHANK1-205ENST00000461154 PPIP5K1Q6PFW1 1433 aa22.79■■□□□ 1.24
SHANK1-205ENST00000461154 ARHGEF10O15013 1369 aa22.78■■□□□ 1.24
SHANK1-205ENST00000461154 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
SHANK1-205ENST00000461154 TMF1P82094 1093 aa22.77■■□□□ 1.24
SHANK1-205ENST00000461154 AFF2P51816 1311 aa22.77■■□□□ 1.24
SHANK1-205ENST00000461154 PUS7Q96PZ0 661 aaKnown RBP22.76■■□□□ 1.23
SHANK1-205ENST00000461154 ACEP12821 1306 aa22.76■■□□□ 1.23
SHANK1-205ENST00000461154 POLR3AO14802 1390 aaPredicted RBP22.76■■□□□ 1.23
SHANK1-205ENST00000461154 PAK3O75914 559 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms