RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 DCCP43146 1447 aa11.77□□□□□ -0.52
SND1-202ENST00000461056 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
SND1-202ENST00000461056 PROSER2Q86WR7 435 aaPredicted RBP11.76□□□□□ -0.53
SND1-202ENST00000461056 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
SND1-202ENST00000461056 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
SND1-202ENST00000461056 NALCNQ8IZF0 1738 aa11.74□□□□□ -0.53
SND1-202ENST00000461056 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.74□□□□□ -0.53
SND1-202ENST00000461056 WAPLQ7Z5K2 1190 aa11.74□□□□□ -0.53
SND1-202ENST00000461056 STK26Q9P289 416 aa11.74□□□□□ -0.53
SND1-202ENST00000461056 MST1RQ04912 1400 aa11.73□□□□□ -0.53
SND1-202ENST00000461056 ARHGEF28Q8N1W1 1705 aaKnown RBP11.73□□□□□ -0.53
SND1-202ENST00000461056 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
SND1-202ENST00000461056 ROCK2O75116 1388 aaKnown RBP11.72□□□□□ -0.53
SND1-202ENST00000461056 PRAM1Q96QH2 718 aa11.72□□□□□ -0.53
SND1-202ENST00000461056 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
SND1-202ENST00000461056 MSH6P52701 1360 aa11.71□□□□□ -0.53
SND1-202ENST00000461056 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
SND1-202ENST00000461056 TRAK1Q9UPV9 953 aa11.71□□□□□ -0.53
SND1-202ENST00000461056 FBXO41Q8TF61 875 aa11.7□□□□□ -0.54
SND1-202ENST00000461056 SBNO2Q9Y2G9 1366 aa11.69□□□□□ -0.54
SND1-202ENST00000461056 C1orf167Q5SNV9 1468 aa11.68□□□□□ -0.54
SND1-202ENST00000461056 TULP4Q9NRJ4 1543 aa11.67□□□□□ -0.54
SND1-202ENST00000461056 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
SND1-202ENST00000461056 TESK2Q96S53 571 aa11.67□□□□□ -0.54
SND1-202ENST00000461056 CENPJQ9HC77 1338 aaPredicted RBP11.66□□□□□ -0.54
SND1-202ENST00000461056 CADPS2Q86UW7 1296 aa11.66□□□□□ -0.54
SND1-202ENST00000461056 CARD11Q9BXL7 1154 aa11.66□□□□□ -0.54
SND1-202ENST00000461056 SLAIN2Q9P270 581 aa11.66□□□□□ -0.54
SND1-202ENST00000461056 ANKARQ7Z5J8 1434 aa11.66□□□□□ -0.54
SND1-202ENST00000461056 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
SND1-202ENST00000461056 PRR36Q9H6K5 1346 aa11.65□□□□□ -0.54
SND1-202ENST00000461056 ATP7BP35670 1465 aa11.65□□□□□ -0.54
SND1-202ENST00000461056 USP32Q8NFA0 1604 aa11.65□□□□□ -0.54
SND1-202ENST00000461056 TOM1O60784 492 aa11.65□□□□□ -0.54
SND1-202ENST00000461056 USP47Q96K76 1375 aa11.65□□□□□ -0.55
SND1-202ENST00000461056 SAFB2Q14151 953 aaKnown RBP eCLIP11.64□□□□□ -0.55
SND1-202ENST00000461056 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
SND1-202ENST00000461056 POGKQ9P215 609 aa11.64□□□□□ -0.55
SND1-202ENST00000461056 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
SND1-202ENST00000461056 MINK1Q8N4C8 1332 aaPredicted RBP11.63□□□□□ -0.55
SND1-202ENST00000461056 WASLO00401 505 aaPredicted RBP11.63□□□□□ -0.55
SND1-202ENST00000461056 AHDC1Q5TGY3 1603 aaPredicted RBP11.63□□□□□ -0.55
SND1-202ENST00000461056 ATF3P18847 181 aa11.62□□□□□ -0.55
SND1-202ENST00000461056 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
SND1-202ENST00000461056 HIRIP3Q9BW71 556 aaPredicted RBP11.62□□□□□ -0.55
SND1-202ENST00000461056 QRICH2Q9H0J4 1663 aa11.62□□□□□ -0.55
SND1-202ENST00000461056 ROBO1Q9Y6N7 1651 aa11.62□□□□□ -0.55
SND1-202ENST00000461056 ILDR1Q86SU0 546 aaPredicted RBP11.61□□□□□ -0.55
SND1-202ENST00000461056 ORAI2Q96SN7 254 aa11.61□□□□□ -0.55
SND1-202ENST00000461056 TOPAZ1Q8N9V7 1692 aa11.6□□□□□ -0.55
SND1-202ENST00000461056 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
SND1-202ENST00000461056 PXDNQ92626 1479 aa11.59□□□□□ -0.55
SND1-202ENST00000461056 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
SND1-202ENST00000461056 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
SND1-202ENST00000461056 DISP3Q9P2K9 1392 aa11.58□□□□□ -0.56
SND1-202ENST00000461056 COL16A1Q07092 1604 aaPredicted RBP11.58□□□□□ -0.56
SND1-202ENST00000461056 HSPA1LP34931 641 aa11.58□□□□□ -0.56
SND1-202ENST00000461056 PIP4K2BP78356 416 aa11.58□□□□□ -0.56
SND1-202ENST00000461056 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
SND1-202ENST00000461056 PUS7Q96PZ0 661 aaKnown RBP11.57□□□□□ -0.56
SND1-202ENST00000461056 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
SND1-202ENST00000461056 PLEKHG3A1L390 1219 aa11.56□□□□□ -0.56
SND1-202ENST00000461056 NUDT16Q96DE0 195 aaKnown RBP11.56□□□□□ -0.56
SND1-202ENST00000461056 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
SND1-202ENST00000461056 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
SND1-202ENST00000461056 HSPA5P11021 654 aaKnown RBP11.55□□□□□ -0.56
SND1-202ENST00000461056 DDX17Q92841 729 aaKnown RBP11.55□□□□□ -0.56
SND1-202ENST00000461056 CABP2Q9NPB3 220 aa11.55□□□□□ -0.56
SND1-202ENST00000461056 KIF1AQ12756 1690 aa11.55□□□□□ -0.56
SND1-202ENST00000461056 EVC2Q86UK5 1308 aa11.55□□□□□ -0.56
SND1-202ENST00000461056 SSH2Q76I76 1423 aa11.54□□□□□ -0.56
SND1-202ENST00000461056 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
SND1-202ENST00000461056 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
SND1-202ENST00000461056 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
SND1-202ENST00000461056 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
SND1-202ENST00000461056 CCDC61Q9Y6R9 512 aa11.53□□□□□ -0.56
SND1-202ENST00000461056 ATAD2Q6PL18 1390 aa11.53□□□□□ -0.56
SND1-202ENST00000461056 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
SND1-202ENST00000461056 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
SND1-202ENST00000461056 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
SND1-202ENST00000461056 FOXO3O43524 673 aa11.51□□□□□ -0.57
SND1-202ENST00000461056 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
SND1-202ENST00000461056 TRPM3Q9HCF6 1732 aaPredicted RBP11.51□□□□□ -0.57
SND1-202ENST00000461056 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
SND1-202ENST00000461056 RGPD8O14715 1765 aaPredicted RBP11.5□□□□□ -0.57
SND1-202ENST00000461056 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
SND1-202ENST00000461056 PNPLA6Q8IY17 1366 aa11.5□□□□□ -0.57
SND1-202ENST00000461056 PHLPP1O60346 1717 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 CABP1Q9NZU7 370 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 ACEP12821 1306 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 NINLQ9Y2I6 1382 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 USP6P35125 1406 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
SND1-202ENST00000461056 TMF1P82094 1093 aa11.48□□□□□ -0.57
SND1-202ENST00000461056 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
SND1-202ENST00000461056 JCADQ9P266 1359 aa11.48□□□□□ -0.57
SND1-202ENST00000461056 TNS3Q68CZ2 1445 aa11.48□□□□□ -0.57
SND1-202ENST00000461056 NRKQ7Z2Y5 1582 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms